Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_B07
(882 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P68372|TBBX_MOUSE Tubulin beta-? chain >gi|55977480|sp|P... 551 e-157
sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin) 551 e-156
sp|P30883|TBB4_XENLA Tubulin beta-4 chain 550 e-156
sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain >gi|56754798|sp|P... 548 e-156
sp|P09206|TBB3_CHICK Tubulin beta-3 chain (Beta-tubulin cla... 547 e-155
sp|Q9NFZ6|TBB2_ECHMU Tubulin beta-2 chain (Beta-tubulin 2) 545 e-155
sp|Q9D6F9|TBB4_MOUSE Tubulin beta-4 chain 545 e-155
sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin cla... 544 e-154
sp|P36221|TBB1_NOTCO Tubulin beta-1 chain (Beta-1 tubulin) 544 e-154
sp|P13602|TBB2_XENLA Tubulin beta-2 chain (Beta-2 tubulin) 543 e-154
>sp|P68372|TBBX_MOUSE Tubulin beta-? chain
sp|P68371|TBBX_HUMAN Tubulin beta-? chain (Tubulin beta-2 chain)
Length = 445
Score = 551 bits (1421), Expect = e-157
Identities = 267/294 (90%), Positives = 274/294 (93%)
Frame = +1
Query: 1 REIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 180
REIVHLQAGQCGNQIG+KFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP
Sbjct: 2 REIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 61
Query: 181 RAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIVR 360
RAVLVDLEPGTMDSVR+GPFGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD+VR
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 121
Query: 361 KEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVVE 540
KEAESCDCLQGFQ KIREEYPDR+M TFSVVPSPKVSDTVVE
Sbjct: 122 KEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVE 181
Query: 541 PYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 720
PYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR
Sbjct: 182 PYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 241
Query: 721 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFD 882
FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD
Sbjct: 242 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD 295
>sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin)
Length = 447
Score = 551 bits (1419), Expect = e-156
Identities = 266/294 (90%), Positives = 274/294 (93%)
Frame = +1
Query: 1 REIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 180
REIVH+QAGQCGNQIG+KFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP
Sbjct: 2 REIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 61
Query: 181 RAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIVR 360
RAVLVDLEPGTMDSVR+GPFGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD+VR
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 121
Query: 361 KEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVVE 540
KEAESCDCLQGFQ KIREEYPDR+M TFSVVPSPKVSDTVVE
Sbjct: 122 KEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVE 181
Query: 541 PYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 720
PYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR
Sbjct: 182 PYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 241
Query: 721 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFD 882
FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD
Sbjct: 242 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD 295
>sp|P30883|TBB4_XENLA Tubulin beta-4 chain
Length = 445
Score = 550 bits (1416), Expect = e-156
Identities = 266/294 (90%), Positives = 273/294 (92%)
Frame = +1
Query: 1 REIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 180
REIVHLQAGQCGNQIG+KFWEVISDEHGIDPTG YHGDSDLQLERINVYYNEATGGKYVP
Sbjct: 2 REIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGAYHGDSDLQLERINVYYNEATGGKYVP 61
Query: 181 RAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIVR 360
RAVLVDLEPGTMDSVR+GPFGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD+VR
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 121
Query: 361 KEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVVE 540
KEAESCDCLQGFQ KIREEYPDR+M TFSVVPSPKVSDTVVE
Sbjct: 122 KEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVE 181
Query: 541 PYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 720
PYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR
Sbjct: 182 PYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 241
Query: 721 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFD 882
FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD
Sbjct: 242 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD 295
>sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain
sp|P69895|TBB2_MACMU Tubulin beta-2 chain
sp|P07437|TBB2_HUMAN Tubulin beta-2 chain
sp|P09244|TBB7_CHICK Tubulin beta-7 chain (Tubulin beta 4')
sp|P99024|TBB5_MOUSE Tubulin beta-5 chain
sp|P69897|TBB5_RAT Tubulin beta-5 chain
sp|P69893|TBB1_CRIGR Tubulin beta-1 chain (Beta-tubulin isotype I) (Class I beta
tubulin)
Length = 444
Score = 548 bits (1412), Expect = e-156
Identities = 263/294 (89%), Positives = 274/294 (93%)
Frame = +1
Query: 1 REIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 180
REIVH+QAGQCGNQIG+KFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYVP
Sbjct: 2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVP 61
Query: 181 RAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIVR 360
RA+LVDLEPGTMDSVR+GPFGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD+VR
Sbjct: 62 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 121
Query: 361 KEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVVE 540
KEAESCDCLQGFQ KIREEYPDR+M TFSVVPSPKVSDTVVE
Sbjct: 122 KEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVE 181
Query: 541 PYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 720
PYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR
Sbjct: 182 PYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 241
Query: 721 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFD 882
FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD
Sbjct: 242 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFD 295
>sp|P09206|TBB3_CHICK Tubulin beta-3 chain (Beta-tubulin class-IV)
Length = 445
Score = 547 bits (1410), Expect = e-155
Identities = 265/294 (90%), Positives = 273/294 (92%)
Frame = +1
Query: 1 REIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 180
REIVHLQAGQCGNQIG+KFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP
Sbjct: 2 REIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 61
Query: 181 RAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIVR 360
RAVLVDLEPGTMDSVR+GPF QIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD+VR
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFRQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 121
Query: 361 KEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVVE 540
KEAESCDCLQGFQ KIREEYPDR+M TFSVVPSPKVSDTVVE
Sbjct: 122 KEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVE 181
Query: 541 PYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 720
PYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR
Sbjct: 182 PYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 241
Query: 721 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFD 882
FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVP+LTQQ+FD
Sbjct: 242 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPDLTQQMFD 295
>sp|Q9NFZ6|TBB2_ECHMU Tubulin beta-2 chain (Beta-tubulin 2)
Length = 445
Score = 545 bits (1404), Expect = e-155
Identities = 260/294 (88%), Positives = 274/294 (93%)
Frame = +1
Query: 1 REIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 180
REIVH+QAGQCGNQIG+KFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA+GGKYVP
Sbjct: 2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVP 61
Query: 181 RAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIVR 360
RA+LVDLEPGTMDSVRAGPFGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD++R
Sbjct: 62 RAILVDLEPGTMDSVRAGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIR 121
Query: 361 KEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVVE 540
KEAESCDCLQGFQ KIREEYPDR+M+T+SVVPSPKVSDTVVE
Sbjct: 122 KEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVE 181
Query: 541 PYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 720
PYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL+ PTYGDLNHLVSATMSGVTTCLR
Sbjct: 182 PYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSNPTYGDLNHLVSATMSGVTTCLR 241
Query: 721 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFD 882
FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL+VPELTQQ+FD
Sbjct: 242 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFD 295
>sp|Q9D6F9|TBB4_MOUSE Tubulin beta-4 chain
Length = 444
Score = 545 bits (1403), Expect = e-155
Identities = 263/294 (89%), Positives = 272/294 (92%)
Frame = +1
Query: 1 REIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 180
REIVHLQAGQCGNQIG+KFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG YVP
Sbjct: 2 REIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVP 61
Query: 181 RAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIVR 360
RAVLVDLEPGTMDSVR+GPFGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD+VR
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVR 121
Query: 361 KEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVVE 540
KEAESCDCLQGFQ KIREE+PDR+M TFSVVPSPKVSDTVVE
Sbjct: 122 KEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVVE 181
Query: 541 PYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 720
PYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR
Sbjct: 182 PYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 241
Query: 721 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFD 882
FPGQLNADLRKLAVNMVPFPRLHFFMPG APLTSRGSQQYRALTVPELTQQ+FD
Sbjct: 242 FPGQLNADLRKLAVNMVPFPRLHFFMPGLAPLTSRGSQQYRALTVPELTQQMFD 295
>sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin class-II)
Length = 445
Score = 544 bits (1402), Expect = e-154
Identities = 261/294 (88%), Positives = 273/294 (92%)
Frame = +1
Query: 1 REIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 180
REIVH+QAGQCGNQIG+KFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG KYVP
Sbjct: 2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVP 61
Query: 181 RAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIVR 360
RA+LVDLEPGTMDSVR+GPFGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD+VR
Sbjct: 62 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 121
Query: 361 KEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVVE 540
KE+ESCDCLQGFQ KIREEYPDR+M TFSV+PSPKVSDTVVE
Sbjct: 122 KESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVE 181
Query: 541 PYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 720
PYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR
Sbjct: 182 PYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 241
Query: 721 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFD 882
FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD
Sbjct: 242 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD 295
>sp|P36221|TBB1_NOTCO Tubulin beta-1 chain (Beta-1 tubulin)
Length = 446
Score = 544 bits (1401), Expect = e-154
Identities = 262/294 (89%), Positives = 272/294 (92%)
Frame = +1
Query: 1 REIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 180
REIVHLQAGQCGNQIGSKFWEVISDEHGIDPTG+YHGDSDLQL+RINVYYNEA+GGKYVP
Sbjct: 2 REIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLDRINVYYNEASGGKYVP 61
Query: 181 RAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIVR 360
RAVLVDLEPGTMDSVR+GPFGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD+VR
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 121
Query: 361 KEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVVE 540
KEAE CDCLQGFQ KIREEYPDR+M TFSVVPSPKVSDTVVE
Sbjct: 122 KEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVE 181
Query: 541 PYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 720
PYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR
Sbjct: 182 PYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 241
Query: 721 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFD 882
FPGQLNADLRKLAVNMVPFPRLHFF+PGFAPLTSRG QQYR+LTVPELTQQ+FD
Sbjct: 242 FPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGGQQYRSLTVPELTQQMFD 295
>sp|P13602|TBB2_XENLA Tubulin beta-2 chain (Beta-2 tubulin)
Length = 443
Score = 543 bits (1400), Expect = e-154
Identities = 261/294 (88%), Positives = 273/294 (92%)
Frame = +1
Query: 1 REIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 180
REIVHLQAGQCGNQIG+KFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG K+VP
Sbjct: 2 REIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKFVP 61
Query: 181 RAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIVR 360
RA+LVDLEPGTMDSVR+GPFGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD+VR
Sbjct: 62 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 121
Query: 361 KEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVVE 540
KE+ESCDCLQGFQ KIREEYPDR+M TFSV+PSPKVSDTVVE
Sbjct: 122 KESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVE 181
Query: 541 PYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 720
PYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR
Sbjct: 182 PYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 241
Query: 721 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFD 882
FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD
Sbjct: 242 FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD 295
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,253,609
Number of Sequences: 369166
Number of extensions: 1875194
Number of successful extensions: 5458
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4890
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8790245790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)