Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_A17
(915 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P26932|CNN1_CHICK Calponin-1 (Calponin, smooth muscle) 100 1e-20
sp|Q08092|CNN1_PIG Calponin-1 (Calponin H1, smooth muscle) ... 93 9e-19
sp|Q08290|CNN1_RAT Calponin-1 (Calponin H1, smooth muscle) ... 93 1e-18
sp|Q08091|CNN1_MOUSE Calponin-1 (Calponin H1, smooth muscle... 93 1e-18
sp|P37397|CNN3_RAT Calponin-3 (Calponin, acidic isoform) (C... 92 3e-18
sp|Q15417|CNN3_HUMAN Calponin-3 (Calponin, acidic isoform) 91 3e-18
sp|Q9DAW9|CNN3_MOUSE Calponin-3 (Calponin, acidic isoform) 91 3e-18
sp|P51911|CNN1_HUMAN Calponin-1 (Calponin H1, smooth muscle... 91 6e-18
sp|Q08093|CNN2_MOUSE Calponin-2 (Calponin H2, smooth muscle... 88 3e-17
sp|Q08094|CNN2_PIG Calponin-2 (Calponin H2, smooth muscle) ... 87 7e-17
>sp|P26932|CNN1_CHICK Calponin-1 (Calponin, smooth muscle)
Length = 292
Score = 99.8 bits (247), Expect = 1e-20
Identities = 67/157 (42%), Positives = 92/157 (58%), Gaps = 3/157 (1%)
Frame = +2
Query: 47 NMAQVLNTLLQLGTECQRNEFKGPVCGPKPTYENKREFSEEQLRASQGIIGLQAGSNKGA 226
N QV +TL+ L ++ + + G K + +R F E+LR + IIGLQ G+NK A
Sbjct: 116 NHTQVQSTLIALASQA-KTKGNNVGLGVKYAEKQQRRFQPEKLREGRNIIGLQMGTNKFA 174
Query: 227 SQSGMSMGGV-RHIADIKVDEMSDEAKGIVGLQAGSNKGASQSGMRI-GTQRFINDVSTG 400
SQ GM+ G RH+ D K+ + + LQ G+NKGASQ+GM GT+R I + S G
Sbjct: 175 SQQGMTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPSLG 234
Query: 401 VEMTDEGKSVIGLQAGSNKGASQSGMRI-GTQRFIND 508
+E D ++IGLQ GSNKGASQ GM + G R + D
Sbjct: 235 MERCD--TNIIGLQMGSNKGASQQGMTVYGLPRQVYD 269
Score = 83.6 bits (205), Expect = 7e-16
Identities = 54/114 (47%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Frame = +2
Query: 296 EAKGIVGLQAGSNKGASQSGMRI-GTQRFINDVSTGVEMTDEGKSVIGLQAGSNKGASQS 472
E + I+GLQ G+NK ASQ GM GT+R + D G + + ++ I LQ G+NKGASQ+
Sbjct: 159 EGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLD-QATISLQMGTNKGASQA 217
Query: 473 GMRI-GTQRFINDVSTGVEMSDEGKTVIGLQAGSNKGATQAGMRI-GTQRFIND 628
GM GT+R I + S G+E D +IGLQ GSNKGA+Q GM + G R + D
Sbjct: 218 GMTAPGTKRQIFEPSLGMERCDTN--IIGLQMGSNKGASQQGMTVYGLPRQVYD 269
Score = 31.2 bits (69), Expect = 4.2
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 656 EGKQTIGLQMGPDKSQVDSQSGM-SFGAQRHITD 754
EG+ IGLQMG +K SQ GM ++G +RH+ D
Sbjct: 159 EGRNIIGLQMGTNK--FASQQGMTAYGTRRHLYD 190
>sp|Q08092|CNN1_PIG Calponin-1 (Calponin H1, smooth muscle) (Basic calponin)
Length = 297
Score = 93.2 bits (230), Expect = 9e-19
Identities = 67/157 (42%), Positives = 89/157 (56%), Gaps = 3/157 (1%)
Frame = +2
Query: 47 NMAQVLNTLLQLGTECQRNEFKGPVCGPKPTYENKREFSEEQLRASQGIIGLQAGSNKGA 226
N QV +TLL L + + K V G K + +R+F E+LR + IIGLQ G+NK A
Sbjct: 116 NHTQVQSTLLALASMAKTKGNKVNV-GVKYAEKQERKFEPEKLREGRNIIGLQMGTNKFA 174
Query: 227 SQSGMSMGGV-RHIADIKVDEMSDEAKGIVGLQAGSNKGASQSGMRI-GTQRFINDVSTG 400
SQ GM+ G RH+ D K+ + + LQ G+NKGASQ+GM GT+R I + G
Sbjct: 175 SQQGMTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLG 234
Query: 401 VEMTDEGKSVIGLQAGSNKGASQSGMRI-GTQRFIND 508
+E D + LQ GSNKGASQ GM + G R + D
Sbjct: 235 MEHCDTLN--VSLQMGSNKGASQRGMTVYGLPRQVYD 269
Score = 76.3 bits (186), Expect = 1e-13
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Frame = +2
Query: 296 EAKGIVGLQAGSNKGASQSGMRI-GTQRFINDVSTGVEMTDEGKSVIGLQAGSNKGASQS 472
E + I+GLQ G+NK ASQ GM GT+R + D G + + ++ I LQ G+NKGASQ+
Sbjct: 159 EGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLD-QATISLQMGTNKGASQA 217
Query: 473 GMRI-GTQRFINDVSTGVEMSDEGKTVIGLQAGSNKGATQAGMRI-GTQRFIND 628
GM GT+R I + G+E D + LQ GSNKGA+Q GM + G R + D
Sbjct: 218 GMTAPGTKRQIFEPGLGMEHCDTLN--VSLQMGSNKGASQRGMTVYGLPRQVYD 269
Score = 47.4 bits (111), Expect = 6e-05
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +2
Query: 536 EGKTVIGLQAGSNKGATQAGM-RIGTQRFINDVSTGVEMSDEGKQTIGLQMGPDKSQVDS 712
EG+ +IGLQ G+NK A+Q GM GT+R + D G + + + TI LQMG +K S
Sbjct: 159 EGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLD-QATISLQMGTNKGA--S 215
Query: 713 QSGMSF-GAQRHI 748
Q+GM+ G +R I
Sbjct: 216 QAGMTAPGTKRQI 228
>sp|Q08290|CNN1_RAT Calponin-1 (Calponin H1, smooth muscle) (Basic calponin)
Length = 297
Score = 92.8 bits (229), Expect = 1e-18
Identities = 67/157 (42%), Positives = 88/157 (56%), Gaps = 3/157 (1%)
Frame = +2
Query: 47 NMAQVLNTLLQLGTECQRNEFKGPVCGPKPTYENKREFSEEQLRASQGIIGLQAGSNKGA 226
N QV +TLL L + + K V G K + +R F E+LR + IIGLQ G+NK A
Sbjct: 116 NHTQVQSTLLALASMAKTKGNKVNV-GVKYAEKQERRFEPEKLREGRNIIGLQMGTNKFA 174
Query: 227 SQSGMSMGGV-RHIADIKVDEMSDEAKGIVGLQAGSNKGASQSGMRI-GTQRFINDVSTG 400
SQ GM+ G RH+ D K+ + + LQ G+NKGASQ+GM GT+R I + G
Sbjct: 175 SQQGMTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLG 234
Query: 401 VEMTDEGKSVIGLQAGSNKGASQSGMRI-GTQRFIND 508
+E D + LQ GSNKGASQ GM + G R + D
Sbjct: 235 MEHCDTLN--VSLQMGSNKGASQRGMTVYGLPRQVYD 269
Score = 76.3 bits (186), Expect = 1e-13
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Frame = +2
Query: 296 EAKGIVGLQAGSNKGASQSGMRI-GTQRFINDVSTGVEMTDEGKSVIGLQAGSNKGASQS 472
E + I+GLQ G+NK ASQ GM GT+R + D G + + ++ I LQ G+NKGASQ+
Sbjct: 159 EGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLD-QATISLQMGTNKGASQA 217
Query: 473 GMRI-GTQRFINDVSTGVEMSDEGKTVIGLQAGSNKGATQAGMRI-GTQRFIND 628
GM GT+R I + G+E D + LQ GSNKGA+Q GM + G R + D
Sbjct: 218 GMTAPGTKRQIFEPGLGMEHCDTLN--VSLQMGSNKGASQRGMTVYGLPRQVYD 269
Score = 47.4 bits (111), Expect = 6e-05
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +2
Query: 536 EGKTVIGLQAGSNKGATQAGM-RIGTQRFINDVSTGVEMSDEGKQTIGLQMGPDKSQVDS 712
EG+ +IGLQ G+NK A+Q GM GT+R + D G + + + TI LQMG +K S
Sbjct: 159 EGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLD-QATISLQMGTNKGA--S 215
Query: 713 QSGMSF-GAQRHI 748
Q+GM+ G +R I
Sbjct: 216 QAGMTAPGTKRQI 228
>sp|Q08091|CNN1_MOUSE Calponin-1 (Calponin H1, smooth muscle) (Basic calponin)
Length = 297
Score = 92.8 bits (229), Expect = 1e-18
Identities = 67/157 (42%), Positives = 88/157 (56%), Gaps = 3/157 (1%)
Frame = +2
Query: 47 NMAQVLNTLLQLGTECQRNEFKGPVCGPKPTYENKREFSEEQLRASQGIIGLQAGSNKGA 226
N QV +TLL L + + K V G K + +R F E+LR + IIGLQ G+NK A
Sbjct: 116 NHTQVQSTLLALASMAKTKGNKVNV-GVKYAEKQERRFEPEKLREGRNIIGLQMGTNKFA 174
Query: 227 SQSGMSMGGV-RHIADIKVDEMSDEAKGIVGLQAGSNKGASQSGMRI-GTQRFINDVSTG 400
SQ GM+ G RH+ D K+ + + LQ G+NKGASQ+GM GT+R I + G
Sbjct: 175 SQQGMTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLG 234
Query: 401 VEMTDEGKSVIGLQAGSNKGASQSGMRI-GTQRFIND 508
+E D + LQ GSNKGASQ GM + G R + D
Sbjct: 235 MEHCDTLN--VSLQMGSNKGASQRGMTVYGLPRQVYD 269
Score = 76.3 bits (186), Expect = 1e-13
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Frame = +2
Query: 296 EAKGIVGLQAGSNKGASQSGMRI-GTQRFINDVSTGVEMTDEGKSVIGLQAGSNKGASQS 472
E + I+GLQ G+NK ASQ GM GT+R + D G + + ++ I LQ G+NKGASQ+
Sbjct: 159 EGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLD-QATISLQMGTNKGASQA 217
Query: 473 GMRI-GTQRFINDVSTGVEMSDEGKTVIGLQAGSNKGATQAGMRI-GTQRFIND 628
GM GT+R I + G+E D + LQ GSNKGA+Q GM + G R + D
Sbjct: 218 GMTAPGTKRQIFEPGLGMEHCDTLN--VSLQMGSNKGASQRGMTVYGLPRQVYD 269
Score = 47.4 bits (111), Expect = 6e-05
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +2
Query: 536 EGKTVIGLQAGSNKGATQAGM-RIGTQRFINDVSTGVEMSDEGKQTIGLQMGPDKSQVDS 712
EG+ +IGLQ G+NK A+Q GM GT+R + D G + + + TI LQMG +K S
Sbjct: 159 EGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLD-QATISLQMGTNKGA--S 215
Query: 713 QSGMSF-GAQRHI 748
Q+GM+ G +R I
Sbjct: 216 QAGMTAPGTKRQI 228
>sp|P37397|CNN3_RAT Calponin-3 (Calponin, acidic isoform) (Calponin, non-muscle
isoform)
Length = 330
Score = 91.7 bits (226), Expect = 3e-18
Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 3/149 (2%)
Frame = +2
Query: 47 NMAQVLNTLLQLGTECQRNEFKGPV-CGPKPTYENKREFSEEQLRASQGIIGLQAGSNKG 223
NM QV TL+ L + F + G K + R F E +L+A Q +IGLQ G+NK
Sbjct: 114 NMTQVQTTLVALAGLAKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKC 173
Query: 224 ASQSGMSMGGV-RHIADIKVDEMSDEAKGIVGLQAGSNKGASQSGMRI-GTQRFINDVST 397
ASQ+GM+ G RH+ D K+ + + LQ G+NKGASQ+GM GT+R I D
Sbjct: 174 ASQAGMTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMSAPGTRRDIYDQKL 233
Query: 398 GVEMTDEGKSVIGLQAGSNKGASQSGMRI 484
++ D S I LQ G+NK ASQ GM +
Sbjct: 234 TLQPVD--NSTISLQMGTNKVASQKGMSV 260
Score = 47.0 bits (110), Expect = 7e-05
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Frame = +2
Query: 539 GKTVIGLQAGSNKGATQAGM-RIGTQRFINDVSTGVEMSDEGKQTIGLQMGPDKSQVDSQ 715
G++VIGLQ G+NK A+QAGM GT+R + D + + + TI LQMG +K SQ
Sbjct: 160 GQSVIGLQMGTNKCASQAGMTAYGTRRHLYDPKMQTDKPFD-QTTISLQMGTNKGA--SQ 216
Query: 716 SGMSF-GAQRHITD 754
+GMS G +R I D
Sbjct: 217 AGMSAPGTRRDIYD 230
>sp|Q15417|CNN3_HUMAN Calponin-3 (Calponin, acidic isoform)
Length = 329
Score = 91.3 bits (225), Expect = 3e-18
Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 3/149 (2%)
Frame = +2
Query: 47 NMAQVLNTLLQLGTECQRNEFKGPV-CGPKPTYENKREFSEEQLRASQGIIGLQAGSNKG 223
NM QV TL+ L + F + G K + R F E +L+A Q +IGLQ G+NK
Sbjct: 114 NMTQVQTTLVALAGLAKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKC 173
Query: 224 ASQSGMSMGGV-RHIADIKVDEMSDEAKGIVGLQAGSNKGASQSGMRI-GTQRFINDVST 397
ASQ+GM+ G RH+ D K+ + + LQ G+NKGASQ+GM GT+R I D
Sbjct: 174 ASQAGMTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKL 233
Query: 398 GVEMTDEGKSVIGLQAGSNKGASQSGMRI 484
++ D S I LQ G+NK ASQ GM +
Sbjct: 234 TLQPVD--NSTISLQMGTNKVASQKGMSV 260
Score = 45.1 bits (105), Expect = 3e-04
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Frame = +2
Query: 539 GKTVIGLQAGSNKGATQAGM-RIGTQRFINDVSTGVEMSDEGKQTIGLQMGPDKSQVDSQ 715
G++VIGLQ G+NK A+QAGM GT+R + D + + + TI LQMG +K SQ
Sbjct: 160 GQSVIGLQMGTNKCASQAGMTAYGTRRHLYDPKMQTDKPFD-QTTISLQMGTNKGA--SQ 216
Query: 716 SGM-SFGAQRHITD 754
+GM + G +R I D
Sbjct: 217 AGMLAPGTRRDIYD 230
>sp|Q9DAW9|CNN3_MOUSE Calponin-3 (Calponin, acidic isoform)
Length = 330
Score = 91.3 bits (225), Expect = 3e-18
Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 3/149 (2%)
Frame = +2
Query: 47 NMAQVLNTLLQLGTECQRNEFKGPV-CGPKPTYENKREFSEEQLRASQGIIGLQAGSNKG 223
NM QV TL+ L + F + G K + R F E +L+A Q +IGLQ G+NK
Sbjct: 114 NMTQVQTTLVALAGLAKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKC 173
Query: 224 ASQSGMSMGGV-RHIADIKVDEMSDEAKGIVGLQAGSNKGASQSGMRI-GTQRFINDVST 397
ASQ+GM+ G RH+ D K+ + + LQ G+NKGASQ+GM GT+R I D
Sbjct: 174 ASQAGMTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKL 233
Query: 398 GVEMTDEGKSVIGLQAGSNKGASQSGMRI 484
++ D S I LQ G+NK ASQ GM +
Sbjct: 234 TLQPVD--NSTISLQMGTNKVASQKGMSV 260
Score = 45.1 bits (105), Expect = 3e-04
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Frame = +2
Query: 539 GKTVIGLQAGSNKGATQAGM-RIGTQRFINDVSTGVEMSDEGKQTIGLQMGPDKSQVDSQ 715
G++VIGLQ G+NK A+QAGM GT+R + D + + + TI LQMG +K SQ
Sbjct: 160 GQSVIGLQMGTNKCASQAGMTAYGTRRHLYDPKMQTDKPFD-QTTISLQMGTNKGA--SQ 216
Query: 716 SGM-SFGAQRHITD 754
+GM + G +R I D
Sbjct: 217 AGMLAPGTRRDIYD 230
>sp|P51911|CNN1_HUMAN Calponin-1 (Calponin H1, smooth muscle) (Basic calponin)
Length = 297
Score = 90.5 bits (223), Expect = 6e-18
Identities = 66/157 (42%), Positives = 88/157 (56%), Gaps = 3/157 (1%)
Frame = +2
Query: 47 NMAQVLNTLLQLGTECQRNEFKGPVCGPKPTYENKREFSEEQLRASQGIIGLQAGSNKGA 226
N QV +TLL L + + K V G K + +R+F +LR + IIGLQ G+NK A
Sbjct: 116 NHTQVQSTLLALASMAKTKGNKVNV-GVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFA 174
Query: 227 SQSGMSMGGV-RHIADIKVDEMSDEAKGIVGLQAGSNKGASQSGMRI-GTQRFINDVSTG 400
SQ GM+ G RH+ D K+ + + LQ G+NKGASQ+GM GT+R I + G
Sbjct: 175 SQQGMTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLG 234
Query: 401 VEMTDEGKSVIGLQAGSNKGASQSGMRI-GTQRFIND 508
+E D + LQ GSNKGASQ GM + G R + D
Sbjct: 235 MEHCDTLN--VSLQMGSNKGASQRGMTVYGLPRQVYD 269
Score = 76.3 bits (186), Expect = 1e-13
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Frame = +2
Query: 296 EAKGIVGLQAGSNKGASQSGMRI-GTQRFINDVSTGVEMTDEGKSVIGLQAGSNKGASQS 472
E + I+GLQ G+NK ASQ GM GT+R + D G + + ++ I LQ G+NKGASQ+
Sbjct: 159 EGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLD-QATISLQMGTNKGASQA 217
Query: 473 GMRI-GTQRFINDVSTGVEMSDEGKTVIGLQAGSNKGATQAGMRI-GTQRFIND 628
GM GT+R I + G+E D + LQ GSNKGA+Q GM + G R + D
Sbjct: 218 GMTAPGTKRQIFEPGLGMEHCDTLN--VSLQMGSNKGASQRGMTVYGLPRQVYD 269
Score = 47.4 bits (111), Expect = 6e-05
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +2
Query: 536 EGKTVIGLQAGSNKGATQAGM-RIGTQRFINDVSTGVEMSDEGKQTIGLQMGPDKSQVDS 712
EG+ +IGLQ G+NK A+Q GM GT+R + D G + + + TI LQMG +K S
Sbjct: 159 EGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLD-QATISLQMGTNKGA--S 215
Query: 713 QSGMSF-GAQRHI 748
Q+GM+ G +R I
Sbjct: 216 QAGMTAPGTKRQI 228
>sp|Q08093|CNN2_MOUSE Calponin-2 (Calponin H2, smooth muscle) (Neutral calponin)
Length = 305
Score = 88.2 bits (217), Expect = 3e-17
Identities = 67/181 (37%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Frame = +2
Query: 47 NMAQVLNTLLQLGTECQRNEFKGPV-CGPKPTYENKREFSEEQLRASQGIIGLQAGSNKG 223
NM QV +LL L + + + V G K + + +R F + ++A Q +IGLQ G+NK
Sbjct: 116 NMTQVQVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKC 175
Query: 224 ASQSGMSMGGV-RHIADIKVDEMSDEAKGIVGLQAGSNKGASQSGMRI-GTQRFINDVST 397
ASQSGM+ G RH+ D K + + LQ G+NK ASQ GM GT+R I D
Sbjct: 176 ASQSGMTAYGTRRHLYDPKNHILPPMDHCTISLQMGTNKCASQVGMTAPGTRRHIYDTKL 235
Query: 398 GVEMTDEGKSVIGLQAGSNKGASQSGMRIGTQRFINDVSTGVEMSDEGKTVIGLQAGSNK 577
G + D S + LQ G +GA+QSG G R I D + +G G AG +
Sbjct: 236 GTDKCD--NSSMSLQMGYTQGANQSGQVFGLGRQIYD----PKYCPQGSAADGAPAGDGQ 289
Query: 578 G 580
G
Sbjct: 290 G 290
Score = 51.2 bits (121), Expect = 4e-06
Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Frame = +2
Query: 383 NDVSTGVEMTDEGKSVIGLQAGSNKGASQSGMRIGT------QRFINDVSTGVEMSDEGK 544
ND+ MT S++ L + QSG+ IG +R +D + G+
Sbjct: 109 NDLFESGNMTQVQVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKA-----GQ 163
Query: 545 TVIGLQAGSNKGATQAGM-RIGTQRFINDVSTGVEMSDEGKQTIGLQMGPDKSQVDSQSG 721
VIGLQ G+NK A+Q+GM GT+R + D + + TI LQMG +K SQ G
Sbjct: 164 CVIGLQMGTNKCASQSGMTAYGTRRHLYDPKNHI-LPPMDHCTISLQMGTNKCA--SQVG 220
Query: 722 MSF-GAQRHITDS 757
M+ G +RHI D+
Sbjct: 221 MTAPGTRRHIYDT 233
>sp|Q08094|CNN2_PIG Calponin-2 (Calponin H2, smooth muscle) (Neutral calponin)
Length = 296
Score = 87.0 bits (214), Expect = 7e-17
Identities = 62/157 (39%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Frame = +2
Query: 47 NMAQVLNTLLQLGTECQRNEFKGPV-CGPKPTYENKREFSEEQLRASQGIIGLQAGSNKG 223
NM QV +LL L + + + V G K + + +R F + ++A Q +IGLQ G+NK
Sbjct: 116 NMTQVQVSLLALAGKAKTKGLQSDVDIGVKYSEKQQRNFDDATMKAGQCVIGLQMGTNKC 175
Query: 224 ASQSGMSMGGV-RHIADIKVDEMSDEAKGIVGLQAGSNKGASQSGMRI-GTQRFINDVST 397
ASQSGM+ G RH+ D K + + LQ G+NK ASQ GM GT+R I D
Sbjct: 176 ASQSGMTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKL 235
Query: 398 GVEMTDEGKSVIGLQAGSNKGASQSGMRIGTQRFIND 508
G + D S + LQ G +GA+QSG G R I D
Sbjct: 236 GTDKCD--NSSMSLQMGYTQGANQSGQVFGLGRQIYD 270
Score = 50.8 bits (120), Expect = 5e-06
Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Frame = +2
Query: 383 NDVSTGVEMTDEGKSVIGLQAGSNKGASQSGMRIGT------QRFINDVSTGVEMSDEGK 544
ND+ MT S++ L + QS + IG QR +D + G+
Sbjct: 109 NDLFESGNMTQVQVSLLALAGKAKTKGLQSDVDIGVKYSEKQQRNFDDATMKA-----GQ 163
Query: 545 TVIGLQAGSNKGATQAGM-RIGTQRFINDVSTGVEMSDEGKQTIGLQMGPDKSQVDSQSG 721
VIGLQ G+NK A+Q+GM GT+R + D + + TI LQMG +K SQ G
Sbjct: 164 CVIGLQMGTNKCASQSGMTAYGTRRHLYDPKNHI-LPPMDHSTISLQMGTNKCA--SQVG 220
Query: 722 MSF-GAQRHITDS 757
M+ G +RHI D+
Sbjct: 221 MTAPGTRRHIYDT 233
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,481,039
Number of Sequences: 369166
Number of extensions: 2315899
Number of successful extensions: 5728
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5553
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9318621220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)