Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_A09
(802 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P22102|PUR2_HUMAN Trifunctional purine biosynthetic prot... 273 5e-73
sp|P21872|PUR2_CHICK Trifunctional purine biosynthetic prot... 272 7e-73
sp|Q64737|PUR2_MOUSE Trifunctional purine biosynthetic prot... 270 3e-72
sp|Q984K6|PUR5_RHILO Phosphoribosylformylglycinamidine cycl... 255 9e-68
sp|Q92QW2|PUR5_RHIME Phosphoribosylformylglycinamidine cycl... 254 1e-67
sp|P20772|PUR2_SCHPO Bifunctional purine biosynthetic prote... 254 2e-67
sp|Q8UG98|PUR5_AGRT5 Phosphoribosylformylglycinamidine cycl... 253 3e-67
sp|Q8G1K5|PUR5_BRUSU Phosphoribosylformylglycinamidine cycl... 253 6e-67
sp|P43848|PUR5_HAEIN Phosphoribosylformylglycinamidine cycl... 253 6e-67
sp|Q88MA9|PUR5_PSEPK Phosphoribosylformylglycinamidine cycl... 252 7e-67
>sp|P22102|PUR2_HUMAN Trifunctional purine biosynthetic protein adenosine-3 [Includes:
Phosphoribosylamine--glycine ligase (GARS) (Glycinamide
ribonucleotide synthetase) (Phosphoribosylglycinamide
synthetase); Phosphoribosylformylglycinamidine
cyclo-ligase (AIRS) (Phosphoribosyl-aminoimidazole
synthetase) (AIR synthase); Phosphoribosylglycinamide
formyltransferase (GART) (GAR transformylase)
(5'-phosphoribosylglycinamide transformylase)]
Length = 1010
Score = 273 bits (697), Expect = 5e-73
Identities = 138/217 (63%), Positives = 171/217 (78%), Gaps = 2/217 (0%)
Frame = +2
Query: 32 GFSDPVLISGTDGVGTKLKIAVLMNKHDTIGQDLVAMCVNDILCHGAEPLYFLDYYASGK 211
GF DP+L SGTDGVGTKLKIA L NKHDTIGQDLVAMCVNDIL GAEPL+FLDY++ GK
Sbjct: 483 GFKDPLLASGTDGVGTKLKIAQLCNKHDTIGQDLVAMCVNDILAQGAEPLFFLDYFSCGK 542
Query: 212 LDLNLSISLLSGIAKACQLAGCSLIGGETAEMPGIYSESDYDLAGFAVGAVERNNLLPKL 391
LDL+++ ++++GIAKAC AGC+L+GGETAEMP +Y +YDLAGFAVGA+ER+ LP L
Sbjct: 543 LDLSVTEAVVAGIAKACGKAGCALLGGETAEMPDMYPPGEYDLAGFAVGAMERDQKLPHL 602
Query: 392 DRIKPGDKIIGLPSNGLHSNGFSLVRKII--SSLSLNSVSPFGDTNMLLGDTLLAPTTIY 565
+RI GD ++G+ S+GLHSNGFSLVRKI+ SSL +S +P G + LGD LL PT IY
Sbjct: 603 ERITEGDVVVGIASSGLHSNGFSLVRKIVAKSSLQYSSPAPDGCGDQTLGDLLLTPTRIY 662
Query: 566 VKPILQLLRNNQFRHYVHSISHITGGGLLENLPRSLP 676
+L +LR+ +V + +HITGGGLLEN+PR LP
Sbjct: 663 SHSLLPVLRSG----HVKAFAHITGGGLLENIPRVLP 695
Score = 32.7 bits (73), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 699 DASTFSIPQIFKWLWKYSSGDFIDFSKTFNLGIG 800
DA T+ IP++F WL + + ++TFN G+G
Sbjct: 703 DAQTWRIPRVFSWLQQEGHLSEEEMARTFNCGVG 736
>sp|P21872|PUR2_CHICK Trifunctional purine biosynthetic protein adenosine-3 [Includes:
Phosphoribosylamine--glycine ligase (GARS) (Glycinamide
ribonucleotide synthetase) (Phosphoribosylglycinamide
synthetase); Phosphoribosylformylglycinamidine
cyclo-ligase (AIRS) (Phosphoribosyl-aminoimidazole
synthetase) (AIR synthase); Phosphoribosylglycinamide
formyltransferase (GART) (GAR transformylase)
(5'-phosphoribosylglycinamide transformylase)]
Length = 1003
Score = 272 bits (696), Expect = 7e-73
Identities = 134/223 (60%), Positives = 171/223 (76%), Gaps = 1/223 (0%)
Frame = +2
Query: 32 GFSDPVLISGTDGVGTKLKIAVLMNKHDTIGQDLVAMCVNDILCHGAEPLYFLDYYASGK 211
G+ DP+L+SGTDGVGTKLKIA + KHDTIGQDLVAMCVNDIL GAEPL+FLDY+A GK
Sbjct: 483 GYKDPILVSGTDGVGTKLKIAQVCKKHDTIGQDLVAMCVNDILAQGAEPLFFLDYFACGK 542
Query: 212 LDLNLSISLLSGIAKACQLAGCSLIGGETAEMPGIYSESDYDLAGFAVGAVERNNLLPKL 391
LD+ ++ +++GIA+ACQ AGC+L+GGETAEMPG+Y +YDLAGFAVGAVER +LP+L
Sbjct: 543 LDVEVAQGVIAGIAEACQKAGCALLGGETAEMPGMYPPGEYDLAGFAVGAVERGQMLPQL 602
Query: 392 DRIKPGDKIIGLPSNGLHSNGFSLVRKIISSLSLNSVSPFG-DTNMLLGDTLLAPTTIYV 568
+RI GD +IG+ S+G+HSNG+SLVR+I+ SL+ S G + LGD LL PT IY
Sbjct: 603 ERIADGDVVIGVASSGVHSNGYSLVRRIVEKSSLDFSSQVGVSGDQTLGDLLLTPTKIYS 662
Query: 569 KPILQLLRNNQFRHYVHSISHITGGGLLENLPRSLPRGMRAII 697
K +L +LR+ + Y +HITGGGLLEN+PR LP ++
Sbjct: 663 KTLLPVLRSGHVKAY----AHITGGGLLENIPRVLPDSFGVVL 701
Score = 33.9 bits (76), Expect = 0.53
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 690 LLFDASTFSIPQIFKWLWKYSSGDFIDFSKTFNLGIG 800
++ DA ++ IP+IF WL K + + ++TFN GIG
Sbjct: 699 VVLDALSWKIPEIFCWLHKEGNLSEEEMARTFNCGIG 735
>sp|Q64737|PUR2_MOUSE Trifunctional purine biosynthetic protein adenosine-3 [Includes:
Phosphoribosylamine--glycine ligase (GARS) (Glycinamide
ribonucleotide synthetase) (Phosphoribosylglycinamide
synthetase); Phosphoribosylformylglycinamidine
cyclo-ligase (AIRS) (Phosphoribosyl-aminoimidazole
synthetase) (AIR synthase); Phosphoribosylglycinamide
formyltransferase (GART) (GAR transformylase)
(5'-phosphoribosylglycinamide transformylase)]
Length = 1010
Score = 270 bits (690), Expect = 3e-72
Identities = 136/218 (62%), Positives = 171/218 (78%), Gaps = 2/218 (0%)
Frame = +2
Query: 32 GFSDPVLISGTDGVGTKLKIAVLMNKHDTIGQDLVAMCVNDILCHGAEPLYFLDYYASGK 211
GF DP+L SGTDGVGTKLKIA L NKHD+IGQDLVAMCVNDIL GAEPL+FLDY++ GK
Sbjct: 483 GFKDPLLASGTDGVGTKLKIAQLCNKHDSIGQDLVAMCVNDILAQGAEPLFFLDYFSCGK 542
Query: 212 LDLNLSISLLSGIAKACQLAGCSLIGGETAEMPGIYSESDYDLAGFAVGAVERNNLLPKL 391
LDL+ + ++++GIA ACQ A C+L+GGETAEMP +Y +YDLAGFAVGA+ER+ LP+L
Sbjct: 543 LDLSTTEAVIAGIAAACQQAACALLGGETAEMPNMYPPGEYDLAGFAVGAMERHQKLPQL 602
Query: 392 DRIKPGDKIIGLPSNGLHSNGFSLVRKII--SSLSLNSVSPFGDTNMLLGDTLLAPTTIY 565
+RI GD +IG+ S+GLHSNGFSLVRKI+ SSL +S +P G + LGD LL PT IY
Sbjct: 603 ERITEGDAVIGVASSGLHSNGFSLVRKIVERSSLQYSSPAPGGCGDQTLGDLLLTPTRIY 662
Query: 566 VKPILQLLRNNQFRHYVHSISHITGGGLLENLPRSLPR 679
+L ++R+ + V + +HITGGGLLEN+PR LP+
Sbjct: 663 SHSLLPIIRSGR----VKAFAHITGGGLLENIPRVLPQ 696
Score = 34.7 bits (78), Expect = 0.31
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 699 DASTFSIPQIFKWLWKYSSGDFIDFSKTFNLGIG 800
DAST+ +P++F WL + + ++TFN GIG
Sbjct: 703 DASTWRVPKVFSWLQQEGELSEEEMARTFNCGIG 736
>sp|Q984K6|PUR5_RHILO Phosphoribosylformylglycinamidine cyclo-ligase (AIRS)
(Phosphoribosyl-aminoimidazole synthetase) (AIR
synthase)
Length = 369
Score = 255 bits (652), Expect = 9e-68
Identities = 132/222 (59%), Positives = 166/222 (74%), Gaps = 2/222 (0%)
Frame = +2
Query: 32 GFSDPVLISGTDGVGTKLKIAVLMNKHDTIGQDLVAMCVNDILCHGAEPLYFLDYYASGK 211
GF+DPVL++ DGVGTKLKIA+ KHDTIG DLVAMCVNDI+ GAEPL+FLDY+A+GK
Sbjct: 71 GFTDPVLVAANDGVGTKLKIAIDAGKHDTIGIDLVAMCVNDIVVQGAEPLFFLDYFATGK 130
Query: 212 LDLNLSISLLSGIAKACQLAGCSLIGGETAEMPGIYSESDYDLAGFAVGAVERNNLLPKL 391
LD + +++ GIA+ C+ AGC+LIGGETAEMPG+Y +DYDLAGFAVGA ER LLP
Sbjct: 131 LDPDQGAAIVGGIAEGCRQAGCALIGGETAEMPGMYHGNDYDLAGFAVGAAERGQLLP-T 189
Query: 392 DRIKPGDKIIGLPSNGLHSNGFSLVRKII--SSLSLNSVSPFGDTNMLLGDTLLAPTTIY 565
D I GD ++GL S+GLHSNGFSLVR+I+ S L+ + +PF D L + LL PT IY
Sbjct: 190 DDIVEGDVLLGLASSGLHSNGFSLVRRIVAASGLAWSDPAPFND-EATLAEALLEPTRIY 248
Query: 566 VKPILQLLRNNQFRHYVHSISHITGGGLLENLPRSLPRGMRA 691
VK IL+ +RN H + +++HITGGG EN+PR LP+ A
Sbjct: 249 VKSILKAIRNT---HGIKALAHITGGGFPENIPRVLPKDFSA 287
>sp|Q92QW2|PUR5_RHIME Phosphoribosylformylglycinamidine cyclo-ligase (AIRS)
(Phosphoribosyl-aminoimidazole synthetase) (AIR
synthase)
Length = 356
Score = 254 bits (650), Expect = 1e-67
Identities = 131/224 (58%), Positives = 170/224 (75%), Gaps = 2/224 (0%)
Frame = +2
Query: 32 GFSDPVLISGTDGVGTKLKIAVLMNKHDTIGQDLVAMCVNDILCHGAEPLYFLDYYASGK 211
GFSDPVL++ DGVGTKLKIA+ +KHDT+G DLVAMCVND++ GAEPL+FLDY+A+GK
Sbjct: 57 GFSDPVLVAANDGVGTKLKIAIDADKHDTVGIDLVAMCVNDLVVQGAEPLFFLDYFATGK 116
Query: 212 LDLNLSISLLSGIAKACQLAGCSLIGGETAEMPGIYSESDYDLAGFAVGAVERNNLLPKL 391
LD + ++++GIA C+ AGC+LIGGETAEMPG+YS DYDLAGFAVGA ER LLP
Sbjct: 117 LDPDQGAAIVAGIAAGCREAGCALIGGETAEMPGMYSGGDYDLAGFAVGAAERGQLLPAG 176
Query: 392 DRIKPGDKIIGLPSNGLHSNGFSLVRKII--SSLSLNSVSPFGDTNMLLGDTLLAPTTIY 565
D I GD I+GL S+G+HSNG+SLVRKI+ S L+ ++ +PFG+ L D L+ PT IY
Sbjct: 177 D-IAEGDVILGLASSGVHSNGYSLVRKIVSLSGLAWDAPAPFGEGT--LADLLMTPTRIY 233
Query: 566 VKPILQLLRNNQFRHYVHSISHITGGGLLENLPRSLPRGMRAII 697
VKP+L+ +R + +++HITGGG EN+PR LP+ + A I
Sbjct: 234 VKPLLKAIRET---GAIKALAHITGGGFPENIPRVLPKHLAAEI 274
>sp|P20772|PUR2_SCHPO Bifunctional purine biosynthetic protein ADE1 [Includes:
Phosphoribosylamine--glycine ligase (GARS) (Glycinamide
ribonucleotide synthetase) (Phosphoribosylglycinamide
synthetase); Phosphoribosylformylglycinamidine
cyclo-ligase (AIRS) (Phosphoribosyl-aminoimidazole
synthetase) (AIR synthase)]
Length = 788
Score = 254 bits (648), Expect = 2e-67
Identities = 126/224 (56%), Positives = 169/224 (75%), Gaps = 2/224 (0%)
Frame = +2
Query: 32 GFSDPVLISGTDGVGTKLKIAVLMNKHDTIGQDLVAMCVNDILCHGAEPLYFLDYYASGK 211
G++DP+L+S TDGVG+KL IA+ +NKHDT+G DLVAM VND++ GAEPL FLDY+A+G
Sbjct: 485 GWNDPLLVSATDGVGSKLLIALSLNKHDTVGIDLVAMNVNDLVVQGAEPLIFLDYFATGS 544
Query: 212 LDLNLSISLLSGIAKACQLAGCSLIGGETAEMPGIYSESDYDLAGFAVGAVERNNLLPKL 391
LDL +S S + G+ K C+ AGC+L+GGET+EMPG+Y + YD G +VGAV R+++LPK
Sbjct: 545 LDLKVSTSFVEGVVKGCKQAGCALVGGETSEMPGLYHDGHYDANGTSVGAVSRDDILPKP 604
Query: 392 DRIKPGDKIIGLPSNGLHSNGFSLVRKII--SSLSLNSVSPFGDTNMLLGDTLLAPTTIY 565
+ GD ++GL S+G+HSNG+SLVRKI+ S L SV P+ D N+ LGD+LL PT IY
Sbjct: 605 ESFSKGDILLGLASDGVHSNGYSLVRKIVEYSDLEYTSVCPW-DKNVRLGDSLLIPTRIY 663
Query: 566 VKPILQLLRNNQFRHYVHSISHITGGGLLENLPRSLPRGMRAII 697
VKP+L ++R N V ++HITGGGL+EN+PR LP + AII
Sbjct: 664 VKPLLHVIRKN----IVKGMAHITGGGLVENVPRMLPSHLNAII 703
Score = 38.5 bits (88), Expect = 0.022
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 693 LFDASTFSIPQIFKWLWKYSSGDFIDFSKTFNLGIG 800
+ D T+ +P++FKWL + D ++TFN+GIG
Sbjct: 702 IIDVDTWEVPEVFKWLKDAGNVPISDMARTFNMGIG 737
>sp|Q8UG98|PUR5_AGRT5 Phosphoribosylformylglycinamidine cyclo-ligase (AIRS)
(Phosphoribosyl-aminoimidazole synthetase) (AIR
synthase)
Length = 357
Score = 253 bits (647), Expect = 3e-67
Identities = 131/224 (58%), Positives = 169/224 (75%), Gaps = 2/224 (0%)
Frame = +2
Query: 32 GFSDPVLISGTDGVGTKLKIAVLMNKHDTIGQDLVAMCVNDILCHGAEPLYFLDYYASGK 211
GF+DPVL++ DGVGTKLKIA+ + HDT+G DLVAMCVND++ GAEPL+FLDY+A+GK
Sbjct: 57 GFTDPVLVAANDGVGTKLKIAIDADYHDTVGIDLVAMCVNDLVVQGAEPLFFLDYFATGK 116
Query: 212 LDLNLSISLLSGIAKACQLAGCSLIGGETAEMPGIYSESDYDLAGFAVGAVERNNLLPKL 391
LD + +++SGIA C+ +GC+LIGGETAEMPG+YS+ DYDLAGFAVGA ER LLP
Sbjct: 117 LDPDQGAAIVSGIAAGCRESGCALIGGETAEMPGMYSDGDYDLAGFAVGAAERGQLLPAG 176
Query: 392 DRIKPGDKIIGLPSNGLHSNGFSLVRKII--SSLSLNSVSPFGDTNMLLGDTLLAPTTIY 565
D I GD I+GL S+G+HSNGFSLVRKI+ S L ++ +PF D LG+ LL PT IY
Sbjct: 177 D-IAEGDVILGLSSSGVHSNGFSLVRKIVSLSGLEWSAPAPFAD-GKKLGEALLTPTRIY 234
Query: 566 VKPILQLLRNNQFRHYVHSISHITGGGLLENLPRSLPRGMRAII 697
VKP+L+ +R + +++HITGGG EN+PR LP+ + A I
Sbjct: 235 VKPLLKAIRET---GALKALAHITGGGFPENIPRVLPKHLAAEI 275
Score = 30.0 bits (66), Expect = 7.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 699 DASTFSIPQIFKWLWKYSSGDFIDFSKTFNLGIG 800
D + +P +F WL K + + +TFN G+G
Sbjct: 276 DLAAIKVPAVFSWLAKTGGVEAHEMLRTFNCGVG 309
>sp|Q8G1K5|PUR5_BRUSU Phosphoribosylformylglycinamidine cyclo-ligase (AIRS)
(Phosphoribosyl-aminoimidazole synthetase) (AIR
synthase)
Length = 359
Score = 253 bits (645), Expect = 6e-67
Identities = 130/224 (58%), Positives = 168/224 (75%), Gaps = 2/224 (0%)
Frame = +2
Query: 32 GFSDPVLISGTDGVGTKLKIAVLMNKHDTIGQDLVAMCVNDILCHGAEPLYFLDYYASGK 211
GF DPVL++ DGVGTKLKIA+ + HDT+G DLVAMCVND++ GAEPL+FLDYYA+GK
Sbjct: 61 GFKDPVLVAANDGVGTKLKIAIDADIHDTVGIDLVAMCVNDLVVQGAEPLFFLDYYATGK 120
Query: 212 LDLNLSISLLSGIAKACQLAGCSLIGGETAEMPGIYSESDYDLAGFAVGAVERNNLLPKL 391
L + ++++SGIA+ C+ AGC+LIGGETAEMPG+Y + DYDLAGFAVGA ER+ LLP+
Sbjct: 121 LSPDQGVAIVSGIAEGCRQAGCALIGGETAEMPGMYRDGDYDLAGFAVGAAERDRLLPRG 180
Query: 392 DRIKPGDKIIGLPSNGLHSNGFSLVRKII--SSLSLNSVSPFGDTNMLLGDTLLAPTTIY 565
D I GD I+GL S+G+HSNGFSLVR+I+ S L S +PF LG+ LL PT IY
Sbjct: 181 D-IAEGDIILGLASSGVHSNGFSLVRRIVELSGLGWKSQAPF-QPGATLGEALLTPTRIY 238
Query: 566 VKPILQLLRNNQFRHYVHSISHITGGGLLENLPRSLPRGMRAII 697
VKP+L +R + +++HITGGG +N+PR LP+G+ A I
Sbjct: 239 VKPLLAAIRACD---GIKALAHITGGGFPDNIPRVLPKGLAAEI 279
>sp|P43848|PUR5_HAEIN Phosphoribosylformylglycinamidine cyclo-ligase (AIRS)
(Phosphoribosyl-aminoimidazole synthetase) (AIR
synthase)
Length = 344
Score = 253 bits (645), Expect = 6e-67
Identities = 123/225 (54%), Positives = 170/225 (75%), Gaps = 4/225 (1%)
Frame = +2
Query: 35 FSDPVLISGTDGVGTKLKIAVLMNKHDTIGQDLVAMCVNDILCHGAEPLYFLDYYASGKL 214
+ +P+L+SGTDGVGTKL++A+ + KHDTIGQDLVAMCVND++ GAEPL+FLDYYA+GKL
Sbjct: 54 YKEPILVSGTDGVGTKLRLAIDLKKHDTIGQDLVAMCVNDLIVQGAEPLFFLDYYATGKL 113
Query: 215 DLNLSISLLSGIAKACQLAGCSLIGGETAEMPGIYSESDYDLAGFAVGAVERNNLLPKLD 394
D++++ S++ GIA C+++GC+L+GGETAEMPG+Y E DYDLAGF VG VE++ ++
Sbjct: 114 DVDVAASVIKGIADGCEMSGCALVGGETAEMPGMYHEGDYDLAGFCVGVVEKSEIIDG-T 172
Query: 395 RIKPGDKIIGLPSNGLHSNGFSLVRKIISSLSLNSVSPFGDTNML----LGDTLLAPTTI 562
+K GD +I L S+G HSNG+SL+RK++ VS T++L L + LLAPT I
Sbjct: 173 AVKTGDTLIALGSSGAHSNGYSLIRKVL------EVSGANPTDLLEGKPLSEHLLAPTKI 226
Query: 563 YVKPILQLLRNNQFRHYVHSISHITGGGLLENLPRSLPRGMRAII 697
YVK ILQL++ + VH+I+H+TGGG EN+PR LP +A+I
Sbjct: 227 YVKSILQLIKQTE----VHAIAHLTGGGFWENIPRVLPDNTKAVI 267
>sp|Q88MA9|PUR5_PSEPK Phosphoribosylformylglycinamidine cyclo-ligase (AIRS)
(Phosphoribosyl-aminoimidazole synthetase) (AIR
synthase)
Length = 352
Score = 252 bits (644), Expect = 7e-67
Identities = 122/222 (54%), Positives = 170/222 (76%)
Frame = +2
Query: 32 GFSDPVLISGTDGVGTKLKIAVLMNKHDTIGQDLVAMCVNDILCHGAEPLYFLDYYASGK 211
G+ PVL+SGTDGVGTKL++A+ +NKHD+IGQDLVAMCVND++ GAEPL+FLDYYA+GK
Sbjct: 54 GYKQPVLVSGTDGVGTKLRLALNLNKHDSIGQDLVAMCVNDLVVCGAEPLFFLDYYATGK 113
Query: 212 LDLNLSISLLSGIAKACQLAGCSLIGGETAEMPGIYSESDYDLAGFAVGAVERNNLLPKL 391
L+++++ ++++GI C+LAGCSL+GGETAEMPG+Y DYDLAGF VG VE+ ++
Sbjct: 114 LNVDVAATVVTGIGAGCELAGCSLVGGETAEMPGMYEGEDYDLAGFCVGVVEKAEIIDG- 172
Query: 392 DRIKPGDKIIGLPSNGLHSNGFSLVRKIISSLSLNSVSPFGDTNMLLGDTLLAPTTIYVK 571
++ GD +I LPS+G HSNG+SL+RKI+ +S + L D L+APT IYVK
Sbjct: 173 SKVATGDALIALPSSGPHSNGYSLIRKIL-EVSATDIENTQLDGKPLTDLLMAPTRIYVK 231
Query: 572 PILQLLRNNQFRHYVHSISHITGGGLLENLPRSLPRGMRAII 697
P+LQL++N V +++HITGGGLL+N+PR LP+ +A++
Sbjct: 232 PLLQLIKNT---GAVKAMAHITGGGLLDNIPRVLPKNAQAVV 270
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,733,628
Number of Sequences: 369166
Number of extensions: 1824053
Number of successful extensions: 5225
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4949
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7570361805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)