Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_A03
(365 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P07764|ALF_DROME Fructose-bisphosphate aldolase 117 1e-26
sp|P46563|ALF2_CAEEL Fructose-bisphosphate aldolase 2 (Aldo... 116 1e-26
sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase 116 1e-26
sp|P54216|ALF1_CAEEL Fructose-bisphosphate aldolase 1 (Aldo... 116 2e-26
sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase 112 3e-25
sp|P46257|ALF2_PEA Fructose-bisphosphate aldolase, cytoplas... 105 3e-23
sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle... 104 7e-23
sp|O65735|ALF_CICAR Fructose-bisphosphate aldolase, cytopla... 102 4e-22
sp|P53448|ALDOC_CARAU Fructose-bisphosphate aldolase C (Bra... 101 6e-22
sp|P05064|ALDOA_MOUSE Fructose-bisphosphate aldolase A (Mus... 100 2e-21
>sp|P07764|ALF_DROME Fructose-bisphosphate aldolase
Length = 361
Score = 117 bits (292), Expect = 1e-26
Identities = 58/92 (63%), Positives = 70/92 (76%)
Frame = +1
Query: 1 LSGGQSELEATLNLNAINNVEGKKPWALTFSFGRALQGSVLKIWQGKSENVEAAQNQLIH 180
LSGGQSE EAT+NL+AINNV +PWALTFS+GRALQ SVL+ W GK EN+ A QN+L+
Sbjct: 270 LSGGQSEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLK 329
Query: 181 LARMNGNASVGKYVAAENKGDTTSLFVAQHAY 276
A+ NG+A+ GKYVA + SLFVA HAY
Sbjct: 330 RAKANGDAAQGKYVAGSAGAGSGSLFVANHAY 361
>sp|P46563|ALF2_CAEEL Fructose-bisphosphate aldolase 2 (Aldolase CE-2) (CE2)
Length = 366
Score = 116 bits (291), Expect = 1e-26
Identities = 58/93 (62%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
Frame = +1
Query: 1 LSGGQSELEATLNLNAINNVEGKKPWALTFSFGRALQGSVLKIWQGKSENVEAAQNQLIH 180
LSGGQSEL+AT NLNAIN+V+ KPW LTFS+GRALQ SVLK W GK EN+ AAQ L+H
Sbjct: 274 LSGGQSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLH 333
Query: 181 LARMNGNASVGKYVAAENKGDTT-SLFVAQHAY 276
++ NG+AS+GKY + G SLFVA+H+Y
Sbjct: 334 RSKANGDASLGKYAGEDAAGAAAESLFVAKHSY 366
>sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase
Length = 363
Score = 116 bits (291), Expect = 1e-26
Identities = 62/95 (65%), Positives = 70/95 (73%), Gaps = 3/95 (3%)
Frame = +1
Query: 1 LSGGQSELEATLNLNAINNVEGKKPWALTFSFGRALQGSVLKIWQGKSENVEAAQNQLIH 180
LSGGQSEL+AT NLN IN + G KPWALTFSFGRALQ SVL W+GK ENV AAQ +L+
Sbjct: 271 LSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLK 330
Query: 181 LARMNGNASVGKYVAAENKGDT---TSLFVAQHAY 276
LA+ NG A+VGK+ N G T SLFVA HAY
Sbjct: 331 LAKANGAAAVGKFEG--NMGTTLGDKSLFVANHAY 363
>sp|P54216|ALF1_CAEEL Fructose-bisphosphate aldolase 1 (Aldolase CE-1) (CE1)
Length = 366
Score = 116 bits (290), Expect = 2e-26
Identities = 60/94 (63%), Positives = 70/94 (74%), Gaps = 2/94 (2%)
Frame = +1
Query: 1 LSGGQSELEATLNLNAINNVEGKKPWALTFSFGRALQGSVLKIWQGKSENVEAAQNQLIH 180
LSGGQSE +ATLNLNAIN V GKKPWALTFS+GRALQ S L W GK EN+ AAQ L+H
Sbjct: 273 LSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLH 332
Query: 181 LARMNGNASVGKYV--AAENKGDTTSLFVAQHAY 276
A++N ASVGKY A+ + + SLFVA H+Y
Sbjct: 333 RAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366
>sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase
Length = 363
Score = 112 bits (280), Expect = 3e-25
Identities = 57/93 (61%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Frame = +1
Query: 1 LSGGQSELEATLNLNAINNVEGKKPWALTFSFGRALQGSVLKIWQGKSENVEAAQNQLIH 180
LSGGQSEL+AT NLNAIN GKKPWAL+FSFGRALQ S + WQGK ENV+A Q + +
Sbjct: 271 LSGGQSELDATRNLNAINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQ 330
Query: 181 LARMNGNASVGKYVA-AENKGDTTSLFVAQHAY 276
LA+ NG AS+GK+ + SLFVA HAY
Sbjct: 331 LAKANGAASLGKFEGELKTAAGQKSLFVANHAY 363
>sp|P46257|ALF2_PEA Fructose-bisphosphate aldolase, cytoplasmic isozyme 2
Length = 359
Score = 105 bits (262), Expect = 3e-23
Identities = 54/94 (57%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Frame = +1
Query: 1 LSGGQSELEATLNLNAINNVEGKKPWALTFSFGRALQGSVLKIWQGKSENVEAAQNQLIH 180
LSGGQSE EA++NLNAIN ++GKKPW L+FSFGRALQ S LK W GK+ENV+AAQ+ L+
Sbjct: 266 LSGGQSEEEASVNLNAINQIKGKKPWTLSFSFGRALQQSTLKAWGGKTENVKAAQDALLT 325
Query: 181 LARMNGNASVGKYVAAEN--KGDTTSLFVAQHAY 276
A+ N A++G Y A N G + SL V + Y
Sbjct: 326 RAKANSEATLGTYKGASNLGAGASESLHVKDYKY 359
>sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle type
Length = 363
Score = 104 bits (259), Expect = 7e-23
Identities = 54/93 (58%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Frame = +1
Query: 1 LSGGQSELEATLNLNAINNVEGKKPWALTFSFGRALQGSVLKIWQGKSENVEAAQNQLIH 180
LSGGQSE +A+++LNAIN + KPWALTFS+GRALQ SVLK W GK EN++AAQ++L+
Sbjct: 271 LSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMR 330
Query: 181 LARMNGNASVGKY-VAAENKGDTTSLFVAQHAY 276
A++NG AS G+Y SLFVA HAY
Sbjct: 331 RAKINGQASKGEYKPTGTGAAAGESLFVANHAY 363
>sp|O65735|ALF_CICAR Fructose-bisphosphate aldolase, cytoplasmic isozyme
Length = 359
Score = 102 bits (253), Expect = 4e-22
Identities = 53/94 (56%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
Frame = +1
Query: 1 LSGGQSELEATLNLNAINNVEGKKPWALTFSFGRALQGSVLKIWQGKSENVEAAQNQLIH 180
LSGGQSE EAT+NLNAIN V+GKKPW L+FSFGRALQ S LK W GK ENV+ AQ+ L+
Sbjct: 266 LSGGQSEEEATVNLNAINQVKGKKPWTLSFSFGRALQQSTLKAWSGKEENVKNAQDALLT 325
Query: 181 LARMNGNASVGKYVAAENKGD--TTSLFVAQHAY 276
A+ N A++G Y G+ + SL V + Y
Sbjct: 326 RAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359
>sp|P53448|ALDOC_CARAU Fructose-bisphosphate aldolase C (Brain-type aldolase)
Length = 363
Score = 101 bits (251), Expect = 6e-22
Identities = 53/93 (56%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Frame = +1
Query: 1 LSGGQSELEATLNLNAINNVEGKKPWALTFSFGRALQGSVLKIWQGKSENVEAAQNQLIH 180
LSGGQSE EA++NLNAINN KPWALTFS+GRALQ S L W+G EN +AA + +
Sbjct: 271 LSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLK 330
Query: 181 LARMNGNASVGKYVAAENKGDT-TSLFVAQHAY 276
A NG A+ GKYV++ G SL+VA HAY
Sbjct: 331 RAEANGLAAQGKYVSSGMDGSAGQSLYVANHAY 363
>sp|P05064|ALDOA_MOUSE Fructose-bisphosphate aldolase A (Muscle-type aldolase) (Aldolase
1)
Length = 364
Score = 99.8 bits (247), Expect = 2e-21
Identities = 53/94 (56%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Frame = +1
Query: 1 LSGGQSELEATLNLNAINNVEGKKPWALTFSFGRALQGSVLKIWQGKSENVEAAQNQLIH 180
LSGGQSE EA++NLNAIN KPWALTFS+GRALQ S LK W GK EN++AAQ + I
Sbjct: 271 LSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIK 330
Query: 181 LARMNGNASVGKYVAAENKG--DTTSLFVAQHAY 276
A N A GKY + G + SLF++ HAY
Sbjct: 331 RALANSLACQGKYTPSGQSGAAASESLFISNHAY 364
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,495,673
Number of Sequences: 369166
Number of extensions: 827479
Number of successful extensions: 2104
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2088
length of database: 68,354,980
effective HSP length: 88
effective length of database: 52,098,300
effective search space used: 1719243900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)