Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_005_N24
(314 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P53813|PROS_RAT Vitamin K-dependent protein S precursor 33 0.27
sp|Q08761|PROS_MOUSE Vitamin K-dependent protein S precursor 33 0.27
sp|P98118|PROS_RABIT Vitamin K-dependent protein S precursor 32 0.35
sp|P07225|PROS_HUMAN Vitamin K-dependent protein S precursor 32 0.35
sp|Q28520|PROS_MACMU Vitamin K-dependent protein S precursor 32 0.35
sp|P07224|PROS_BOVIN Vitamin K-dependent protein S precursor 32 0.59
sp|Q14393|GAS6_HUMAN Growth-arrest-specific protein 6 precu... 31 0.77
sp|Q63772|GAS6_RAT Growth-arrest-specific protein 6 precurs... 30 1.7
sp|Q90Y57|JAG1A_BRARE Jagged-1a precursor (Jagged1a) (Jagged1) 29 2.9
sp|Q9QXX0|JAG1_MOUSE Jagged-1 precursor (Jagged1) 28 5.0
>sp|P53813|PROS_RAT Vitamin K-dependent protein S precursor
Length = 675
Score = 32.7 bits (73), Expect = 0.27
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 186 LLHKCIERLCQWEDRAWQLNENKPNTDFFYIK 281
L +CIE LC E+ A ++ EN P TD+FY K
Sbjct: 54 LERECIEELCNKEE-AREVFENNPETDYFYPK 84
>sp|Q08761|PROS_MOUSE Vitamin K-dependent protein S precursor
Length = 675
Score = 32.7 bits (73), Expect = 0.27
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 186 LLHKCIERLCQWEDRAWQLNENKPNTDFFYIK 281
L +CIE LC E+ A ++ EN P TD+FY K
Sbjct: 54 LERECIEELCNKEE-AREVFENNPETDYFYPK 84
>sp|P98118|PROS_RABIT Vitamin K-dependent protein S precursor
Length = 646
Score = 32.3 bits (72), Expect = 0.35
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 186 LLHKCIERLCQWEDRAWQLNENKPNTDFFYIK 281
L +CIE LC E+ A ++ EN P TD+FY K
Sbjct: 25 LERECIEELCNKEE-AREVFENDPETDYFYPK 55
>sp|P07225|PROS_HUMAN Vitamin K-dependent protein S precursor
Length = 676
Score = 32.3 bits (72), Expect = 0.35
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 186 LLHKCIERLCQWEDRAWQLNENKPNTDFFYIK 281
L +CIE LC E+ A ++ EN P TD+FY K
Sbjct: 54 LERECIEELCNKEE-AREVFENDPETDYFYPK 84
>sp|Q28520|PROS_MACMU Vitamin K-dependent protein S precursor
Length = 649
Score = 32.3 bits (72), Expect = 0.35
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 186 LLHKCIERLCQWEDRAWQLNENKPNTDFFYIK 281
L +CIE LC E+ A ++ EN P TD+FY K
Sbjct: 27 LERECIEELCNKEE-AREVFENDPETDYFYPK 57
>sp|P07224|PROS_BOVIN Vitamin K-dependent protein S precursor
Length = 675
Score = 31.6 bits (70), Expect = 0.59
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 186 LLHKCIERLCQWEDRAWQLNENKPNTDFFYIK 281
L +CIE LC E+ A ++ EN P T++FY K
Sbjct: 54 LERECIEELCNKEE-AREIFENNPETEYFYPK 84
>sp|Q14393|GAS6_HUMAN Growth-arrest-specific protein 6 precursor (GAS-6)
Length = 721
Score = 31.2 bits (69), Expect = 0.77
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 186 LLHKCIERLCQWEDRAWQLNENKPNTDFFY 275
L +C+E LC E+ A ++ EN P TD+FY
Sbjct: 61 LERECVEELCSREE-AREVFENDPETDYFY 89
>sp|Q63772|GAS6_RAT Growth-arrest-specific protein 6 precursor (GAS-6)
(Growth-potentiating factor) (GPF)
Length = 674
Score = 30.0 bits (66), Expect = 1.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 186 LLHKCIERLCQWEDRAWQLNENKPNTDFFY 275
L +C+E +C E+ A ++ EN P TD+FY
Sbjct: 58 LERECVEEVCSKEE-AREVFENDPETDYFY 86
>sp|Q90Y57|JAG1A_BRARE Jagged-1a precursor (Jagged1a) (Jagged1)
Length = 1242
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 2 PCYLIGKDAEAVGDSWFLCGLAALFAGP 85
PCY G + GD+W+ C A+ FAGP
Sbjct: 793 PCYNSGTCVD--GDNWYRCECASGFAGP 818
>sp|Q9QXX0|JAG1_MOUSE Jagged-1 precursor (Jagged1)
Length = 1218
Score = 28.5 bits (62), Expect = 5.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 2 PCYLIGKDAEAVGDSWFLCGLAALFAGP 85
PCY G + GD+W+ C A FAGP
Sbjct: 790 PCYNSGTCVD--GDNWYRCECAPGFAGP 815
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,043,564
Number of Sequences: 369166
Number of extensions: 643686
Number of successful extensions: 1886
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1883
length of database: 68,354,980
effective HSP length: 73
effective length of database: 54,869,325
effective search space used: 1700949075
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)