Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_005_N17
(891 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P63331|P2AA_RAT Serine/threonine protein phosphatase 2A,... 533 e-151
sp|P67775|P2AA_HUMAN Serine/threonine protein phosphatase 2... 533 e-151
sp|P11611|P2AB_RABIT Serine/threonine protein phosphatase 2... 532 e-151
sp|P62714|P2AB_HUMAN Serine/threonine protein phosphatase 2... 532 e-151
sp|P11493|P2AB_PIG Serine/threonine protein phosphatase 2A,... 532 e-151
sp|P48463|P2AA_CHICK Serine/threonine protein phosphatase 2... 532 e-151
sp|P23696|P2A_DROME Serine/threonine protein phosphatase PP... 528 e-150
sp|P48580|P2A1_NEUCR Serine/threonine protein phosphatase P... 520 e-147
sp|Q9HFQ2|P2A1_EMENI Serine/threonine protein phosphatase P... 516 e-146
sp|Q8X178|P2A2_ERYGR Serine/threonine protein phosphatase P... 514 e-145
>sp|P63331|P2AA_RAT Serine/threonine protein phosphatase 2A, catalytic subunit, alpha
isoform (PP2A-alpha)
sp|P63330|P2AA_MOUSE Serine/threonine protein phosphatase 2A, catalytic subunit, alpha
isoform (PP2A-alpha)
Length = 309
Score = 533 bits (1373), Expect = e-151
Identities = 245/277 (88%), Positives = 264/277 (95%)
Frame = +3
Query: 30 KRPRQILEKEGNVQLVKCPVTVCGDVHGQFHDLMELFKIGGKAPDTNYLFMGDYVDRGYY 209
++ ++IL KE NVQ V+CPVTVCGDVHGQFHDLMELF+IGGK+PDTNYLFMGDYVDRGYY
Sbjct: 33 EKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYY 92
Query: 210 SVETVTLLVALKVRYKDRITILRGNHESRQITQVYGFYDECLRKYTNANVWRYFTDLFDY 389
SVETVTLLVALKVRY++RITILRGNHESRQITQVYGFYDECLRKY NANVW+YFTDLFDY
Sbjct: 93 SVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDY 152
Query: 390 LPLTALVESSIFCLHGGLSPSIDTLDHIKALDRIQEVPHEGPMCDLLWSDPDDRSGWGIS 569
LPLTALV+ IFCLHGGLSPSIDTLDHI+ALDR+QEVPHEGPMCDLLWSDPDDR GWGIS
Sbjct: 153 LPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGIS 212
Query: 570 PRGAGYTFGQDIAETFIHSNNLTLVSRAHQLVMEGYNWSHDRNVVTIFSAPNYCYRCGNQ 749
PRGAGYTFGQDI+ETF H+N LTLVSRAHQLVMEGYNW HDRNVVTIFSAPNYCYRCGNQ
Sbjct: 213 PRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQ 272
Query: 750 ASIMELDDNLKYTFLQFDPAPRRGEPQISRRTPDYFL 860
A+IMELDD LKY+FLQFDPAPRRGEP ++RRTPDYFL
Sbjct: 273 AAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPDYFL 309
>sp|P67775|P2AA_HUMAN Serine/threonine protein phosphatase 2A, catalytic subunit, alpha
isoform (PP2A-alpha) (Replication protein C) (RP-C)
sp|P67774|P2AA_BOVIN Serine/threonine protein phosphatase 2A, catalytic subunit, alpha
isoform (PP2A-alpha)
sp|P67777|P2AA_RABIT Serine/threonine protein phosphatase 2A, catalytic subunit, alpha
isoform (PP2A-alpha)
sp|P67776|P2AA_PIG Serine/threonine protein phosphatase 2A, catalytic subunit, alpha
isoform (PP2A-alpha)
Length = 309
Score = 533 bits (1373), Expect = e-151
Identities = 245/277 (88%), Positives = 264/277 (95%)
Frame = +3
Query: 30 KRPRQILEKEGNVQLVKCPVTVCGDVHGQFHDLMELFKIGGKAPDTNYLFMGDYVDRGYY 209
++ ++IL KE NVQ V+CPVTVCGDVHGQFHDLMELF+IGGK+PDTNYLFMGDYVDRGYY
Sbjct: 33 EKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYY 92
Query: 210 SVETVTLLVALKVRYKDRITILRGNHESRQITQVYGFYDECLRKYTNANVWRYFTDLFDY 389
SVETVTLLVALKVRY++RITILRGNHESRQITQVYGFYDECLRKY NANVW+YFTDLFDY
Sbjct: 93 SVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDY 152
Query: 390 LPLTALVESSIFCLHGGLSPSIDTLDHIKALDRIQEVPHEGPMCDLLWSDPDDRSGWGIS 569
LPLTALV+ IFCLHGGLSPSIDTLDHI+ALDR+QEVPHEGPMCDLLWSDPDDR GWGIS
Sbjct: 153 LPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGIS 212
Query: 570 PRGAGYTFGQDIAETFIHSNNLTLVSRAHQLVMEGYNWSHDRNVVTIFSAPNYCYRCGNQ 749
PRGAGYTFGQDI+ETF H+N LTLVSRAHQLVMEGYNW HDRNVVTIFSAPNYCYRCGNQ
Sbjct: 213 PRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQ 272
Query: 750 ASIMELDDNLKYTFLQFDPAPRRGEPQISRRTPDYFL 860
A+IMELDD LKY+FLQFDPAPRRGEP ++RRTPDYFL
Sbjct: 273 AAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPDYFL 309
>sp|P11611|P2AB_RABIT Serine/threonine protein phosphatase 2A, catalytic subunit, beta
isoform (PP2A-beta)
Length = 309
Score = 532 bits (1371), Expect = e-151
Identities = 245/285 (85%), Positives = 267/285 (93%)
Frame = +3
Query: 6 KHKLNYFVKRPRQILEKEGNVQLVKCPVTVCGDVHGQFHDLMELFKIGGKAPDTNYLFMG 185
++++ ++ ++IL KE NVQ V+CPVTVCGDVHGQFHDLMELF+IGGK+PDTNYLFMG
Sbjct: 25 ENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMG 84
Query: 186 DYVDRGYYSVETVTLLVALKVRYKDRITILRGNHESRQITQVYGFYDECLRKYTNANVWR 365
DYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDECLRKY NANVW+
Sbjct: 85 DYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWK 144
Query: 366 YFTDLFDYLPLTALVESSIFCLHGGLSPSIDTLDHIKALDRIQEVPHEGPMCDLLWSDPD 545
YFTDLFDYLPLTALV+ IFCLHGGLSPSIDTLDHI+ALDR+QEVPHEGPMCDLLWSDPD
Sbjct: 145 YFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD 204
Query: 546 DRSGWGISPRGAGYTFGQDIAETFIHSNNLTLVSRAHQLVMEGYNWSHDRNVVTIFSAPN 725
DR GWGISPRGAGYTFGQDI+ETF H+N LTLVSRAHQLVMEGYNW HDRNVVTIFSAPN
Sbjct: 205 DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPN 264
Query: 726 YCYRCGNQASIMELDDNLKYTFLQFDPAPRRGEPQISRRTPDYFL 860
YCYRCGNQA+IMELDD LKY+FLQFDPAPRRGEP ++RRTPDYFL
Sbjct: 265 YCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPDYFL 309
>sp|P62714|P2AB_HUMAN Serine/threonine protein phosphatase 2A, catalytic subunit, beta
isoform (PP2A-beta)
sp|P62716|P2AB_RAT Serine/threonine protein phosphatase 2A, catalytic subunit, beta
isoform (PP2A-beta)
sp|P62715|P2AB_MOUSE Serine/threonine protein phosphatase 2A, catalytic subunit, beta
isoform (PP2A-beta)
Length = 309
Score = 532 bits (1371), Expect = e-151
Identities = 245/285 (85%), Positives = 267/285 (93%)
Frame = +3
Query: 6 KHKLNYFVKRPRQILEKEGNVQLVKCPVTVCGDVHGQFHDLMELFKIGGKAPDTNYLFMG 185
++++ ++ ++IL KE NVQ V+CPVTVCGDVHGQFHDLMELF+IGGK+PDTNYLFMG
Sbjct: 25 ENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMG 84
Query: 186 DYVDRGYYSVETVTLLVALKVRYKDRITILRGNHESRQITQVYGFYDECLRKYTNANVWR 365
DYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDECLRKY NANVW+
Sbjct: 85 DYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWK 144
Query: 366 YFTDLFDYLPLTALVESSIFCLHGGLSPSIDTLDHIKALDRIQEVPHEGPMCDLLWSDPD 545
YFTDLFDYLPLTALV+ IFCLHGGLSPSIDTLDHI+ALDR+QEVPHEGPMCDLLWSDPD
Sbjct: 145 YFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD 204
Query: 546 DRSGWGISPRGAGYTFGQDIAETFIHSNNLTLVSRAHQLVMEGYNWSHDRNVVTIFSAPN 725
DR GWGISPRGAGYTFGQDI+ETF H+N LTLVSRAHQLVMEGYNW HDRNVVTIFSAPN
Sbjct: 205 DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPN 264
Query: 726 YCYRCGNQASIMELDDNLKYTFLQFDPAPRRGEPQISRRTPDYFL 860
YCYRCGNQA+IMELDD LKY+FLQFDPAPRRGEP ++RRTPDYFL
Sbjct: 265 YCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPDYFL 309
>sp|P11493|P2AB_PIG Serine/threonine protein phosphatase 2A, catalytic subunit, beta
isoform (PP2A-beta)
Length = 293
Score = 532 bits (1371), Expect = e-151
Identities = 245/285 (85%), Positives = 267/285 (93%)
Frame = +3
Query: 6 KHKLNYFVKRPRQILEKEGNVQLVKCPVTVCGDVHGQFHDLMELFKIGGKAPDTNYLFMG 185
++++ ++ ++IL KE NVQ V+CPVTVCGDVHGQFHDLMELF+IGGK+PDTNYLFMG
Sbjct: 9 ENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMG 68
Query: 186 DYVDRGYYSVETVTLLVALKVRYKDRITILRGNHESRQITQVYGFYDECLRKYTNANVWR 365
DYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDECLRKY NANVW+
Sbjct: 69 DYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWK 128
Query: 366 YFTDLFDYLPLTALVESSIFCLHGGLSPSIDTLDHIKALDRIQEVPHEGPMCDLLWSDPD 545
YFTDLFDYLPLTALV+ IFCLHGGLSPSIDTLDHI+ALDR+QEVPHEGPMCDLLWSDPD
Sbjct: 129 YFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD 188
Query: 546 DRSGWGISPRGAGYTFGQDIAETFIHSNNLTLVSRAHQLVMEGYNWSHDRNVVTIFSAPN 725
DR GWGISPRGAGYTFGQDI+ETF H+N LTLVSRAHQLVMEGYNW HDRNVVTIFSAPN
Sbjct: 189 DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPN 248
Query: 726 YCYRCGNQASIMELDDNLKYTFLQFDPAPRRGEPQISRRTPDYFL 860
YCYRCGNQA+IMELDD LKY+FLQFDPAPRRGEP ++RRTPDYFL
Sbjct: 249 YCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPDYFL 293
>sp|P48463|P2AA_CHICK Serine/threonine protein phosphatase 2A, catalytic subunit, alpha
isoform (PP2A-alpha)
Length = 309
Score = 532 bits (1370), Expect = e-151
Identities = 245/277 (88%), Positives = 263/277 (94%)
Frame = +3
Query: 30 KRPRQILEKEGNVQLVKCPVTVCGDVHGQFHDLMELFKIGGKAPDTNYLFMGDYVDRGYY 209
++ ++IL KE NVQ V+CPVTVCGDVHGQFHDLMELF+IGGK+PDTNYLFMGDYVDRGYY
Sbjct: 33 EKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYY 92
Query: 210 SVETVTLLVALKVRYKDRITILRGNHESRQITQVYGFYDECLRKYTNANVWRYFTDLFDY 389
SVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDECLRKY NANVW+YFTDLFDY
Sbjct: 93 SVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDY 152
Query: 390 LPLTALVESSIFCLHGGLSPSIDTLDHIKALDRIQEVPHEGPMCDLLWSDPDDRSGWGIS 569
LPLTALV+ IFCLHGGLSPSIDTLDHI+ALDR+QEVPHEGPMCDLLWSDPDDR GWGIS
Sbjct: 153 LPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGIS 212
Query: 570 PRGAGYTFGQDIAETFIHSNNLTLVSRAHQLVMEGYNWSHDRNVVTIFSAPNYCYRCGNQ 749
PRGAGYTFGQDI+ETF H+N LTLVSRAHQLVMEGYNW HDRNVVTIFSAPNYCYRCGNQ
Sbjct: 213 PRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQ 272
Query: 750 ASIMELDDNLKYTFLQFDPAPRRGEPQISRRTPDYFL 860
A+IMELDD LKY+FLQFDPAPRRGEP ++RRTPDYFL
Sbjct: 273 AAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPDYFL 309
>sp|P23696|P2A_DROME Serine/threonine protein phosphatase PP2A (Microtubule star
protein)
Length = 309
Score = 528 bits (1360), Expect = e-150
Identities = 242/276 (87%), Positives = 264/276 (95%)
Frame = +3
Query: 33 RPRQILEKEGNVQLVKCPVTVCGDVHGQFHDLMELFKIGGKAPDTNYLFMGDYVDRGYYS 212
+ ++IL KE NVQ VKCPVTVCGDVHGQFHDLMELF+IGGK+PDTNYLFMGDYVDRGYYS
Sbjct: 34 KAKEILSKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYS 93
Query: 213 VETVTLLVALKVRYKDRITILRGNHESRQITQVYGFYDECLRKYTNANVWRYFTDLFDYL 392
VETVTLLVALKVRY++RITILRGNHESRQITQVYGFYDECLRKY NANVW+YFTDLFDYL
Sbjct: 94 VETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYL 153
Query: 393 PLTALVESSIFCLHGGLSPSIDTLDHIKALDRIQEVPHEGPMCDLLWSDPDDRSGWGISP 572
PLTALV+ IFCLHGGLSPSID+LDHI+ALDR+QEVPHEGPMCDLLWSDPDDR GWGISP
Sbjct: 154 PLTALVDGQIFCLHGGLSPSIDSLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISP 213
Query: 573 RGAGYTFGQDIAETFIHSNNLTLVSRAHQLVMEGYNWSHDRNVVTIFSAPNYCYRCGNQA 752
RGAGYTFGQDI+ETF ++N LTLVSRAHQLVMEGYNW HDRNVVTIFSAPNYCYRCGNQA
Sbjct: 214 RGAGYTFGQDISETFNNTNGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQA 273
Query: 753 SIMELDDNLKYTFLQFDPAPRRGEPQISRRTPDYFL 860
++MELDD+LK++FLQFDPAPRRGEP ++RRTPDYFL
Sbjct: 274 ALMELDDSLKFSFLQFDPAPRRGEPHVTRRTPDYFL 309
>sp|P48580|P2A1_NEUCR Serine/threonine protein phosphatase PP2A catalytic subunit
Length = 327
Score = 520 bits (1340), Expect = e-147
Identities = 237/277 (85%), Positives = 260/277 (93%)
Frame = +3
Query: 30 KRPRQILEKEGNVQLVKCPVTVCGDVHGQFHDLMELFKIGGKAPDTNYLFMGDYVDRGYY 209
++ R++L+ E NVQ VKCPVTVCGD+HGQFHDLMELFKIGG PDTNYLFMGDYVDRGYY
Sbjct: 51 EKAREVLQDESNVQPVKCPVTVCGDIHGQFHDLMELFKIGGSCPDTNYLFMGDYVDRGYY 110
Query: 210 SVETVTLLVALKVRYKDRITILRGNHESRQITQVYGFYDECLRKYTNANVWRYFTDLFDY 389
SVETVTLLVALK+RY +RITILRGNHESRQITQVYGFYDECLRKY NANVW+YFTDLFDY
Sbjct: 111 SVETVTLLVALKIRYPNRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDY 170
Query: 390 LPLTALVESSIFCLHGGLSPSIDTLDHIKALDRIQEVPHEGPMCDLLWSDPDDRSGWGIS 569
LPLTAL+++ IFCLHGGLSPSIDTLD+I+ALDRIQEVPHEGPMCDLLWSDPDDR GWGIS
Sbjct: 171 LPLTALIDNQIFCLHGGLSPSIDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGIS 230
Query: 570 PRGAGYTFGQDIAETFIHSNNLTLVSRAHQLVMEGYNWSHDRNVVTIFSAPNYCYRCGNQ 749
PRGAGYTFGQDI+E F H+N LTL++RAHQLVMEGYNWS DRNVVTIFSAPNYCYRCGNQ
Sbjct: 231 PRGAGYTFGQDISEAFNHNNGLTLIARAHQLVMEGYNWSQDRNVVTIFSAPNYCYRCGNQ 290
Query: 750 ASIMELDDNLKYTFLQFDPAPRRGEPQISRRTPDYFL 860
A+IME+D++LKYTFLQFDP PR GEP +SRRTPDYFL
Sbjct: 291 AAIMEIDEHLKYTFLQFDPCPRAGEPMVSRRTPDYFL 327
>sp|Q9HFQ2|P2A1_EMENI Serine/threonine protein phosphatase PP2A catalytic subunit
(Protein phosphatase 2a)
Length = 329
Score = 516 bits (1329), Expect = e-146
Identities = 236/276 (85%), Positives = 257/276 (93%)
Frame = +3
Query: 33 RPRQILEKEGNVQLVKCPVTVCGDVHGQFHDLMELFKIGGKAPDTNYLFMGDYVDRGYYS 212
R R++L++E NVQ VKCPVTVCGD+HGQFHDLMELF+IGG PDTNYLFMGDYVDRGYYS
Sbjct: 54 RAREVLQEESNVQPVKCPVTVCGDIHGQFHDLMELFRIGGPNPDTNYLFMGDYVDRGYYS 113
Query: 213 VETVTLLVALKVRYKDRITILRGNHESRQITQVYGFYDECLRKYTNANVWRYFTDLFDYL 392
VETVTLLV LK+RY RIT LRGNHESRQITQVYGFYDECLRKY NANVW+YFTDLFDYL
Sbjct: 114 VETVTLLVCLKIRYPQRITTLRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYL 173
Query: 393 PLTALVESSIFCLHGGLSPSIDTLDHIKALDRIQEVPHEGPMCDLLWSDPDDRSGWGISP 572
PLTAL+E+ IFCLHGGLSPSIDTLD+I++LDRIQEVPHEGPMCDLLWSDPDDR GWGISP
Sbjct: 174 PLTALIENQIFCLHGGLSPSIDTLDNIRSLDRIQEVPHEGPMCDLLWSDPDDRCGWGISP 233
Query: 573 RGAGYTFGQDIAETFIHSNNLTLVSRAHQLVMEGYNWSHDRNVVTIFSAPNYCYRCGNQA 752
RGAGYTFGQDI+E F H+N LTLV+RAHQLVMEGYNWS DRNVVTIFSAPNYCYRCGNQA
Sbjct: 234 RGAGYTFGQDISEAFNHNNGLTLVARAHQLVMEGYNWSQDRNVVTIFSAPNYCYRCGNQA 293
Query: 753 SIMELDDNLKYTFLQFDPAPRRGEPQISRRTPDYFL 860
+IME+D++LKYTFLQFDP PR GEP +SRRTPDYFL
Sbjct: 294 AIMEIDEHLKYTFLQFDPCPRAGEPMVSRRTPDYFL 329
>sp|Q8X178|P2A2_ERYGR Serine/threonine protein phosphatase PP2A-2 catalytic subunit
Length = 328
Score = 514 bits (1324), Expect = e-145
Identities = 235/277 (84%), Positives = 258/277 (93%)
Frame = +3
Query: 30 KRPRQILEKEGNVQLVKCPVTVCGDVHGQFHDLMELFKIGGKAPDTNYLFMGDYVDRGYY 209
++ R++L E NVQ VKCPVTVCGD+HGQFHDLMELF+IGG PDTNYLFMGDYVDRGYY
Sbjct: 52 EKAREVLHSESNVQPVKCPVTVCGDIHGQFHDLMELFRIGGPNPDTNYLFMGDYVDRGYY 111
Query: 210 SVETVTLLVALKVRYKDRITILRGNHESRQITQVYGFYDECLRKYTNANVWRYFTDLFDY 389
SVETVTLLVALK+RY RITILRGNHESRQITQVYGFYDECLRKY NANVW+YFT+LFD+
Sbjct: 112 SVETVTLLVALKIRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTNLFDF 171
Query: 390 LPLTALVESSIFCLHGGLSPSIDTLDHIKALDRIQEVPHEGPMCDLLWSDPDDRSGWGIS 569
LPLTAL+E+ IFCLHGGLSPSIDTLD+IK+LDRIQEVPHEGPMCDLLWSDPDDR GWGIS
Sbjct: 172 LPLTALIENQIFCLHGGLSPSIDTLDNIKSLDRIQEVPHEGPMCDLLWSDPDDRCGWGIS 231
Query: 570 PRGAGYTFGQDIAETFIHSNNLTLVSRAHQLVMEGYNWSHDRNVVTIFSAPNYCYRCGNQ 749
PRGAGYTFGQDI+E F H+N LTLV+RAHQLVMEGYNWS DRNVVTIFSAPNYCYRCGNQ
Sbjct: 232 PRGAGYTFGQDISEAFNHNNGLTLVARAHQLVMEGYNWSQDRNVVTIFSAPNYCYRCGNQ 291
Query: 750 ASIMELDDNLKYTFLQFDPAPRRGEPQISRRTPDYFL 860
A+IME+D++LKYTFLQFDP PR GEP ++RRTPDYFL
Sbjct: 292 AAIMEIDEHLKYTFLQFDPCPRAGEPMVTRRTPDYFL 328
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,672,404
Number of Sequences: 369166
Number of extensions: 2071483
Number of successful extensions: 5516
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5316
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8934348180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)