Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_005_N14
(631 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P35085|CBPA_DICDI Calcium-binding protein 73 5e-13
sp|Q63627|SFR15_RAT Splicing factor, arginine/serine-rich 1... 71 3e-12
sp|P38486|LEG3_CANFA Galectin-3 (Galactose-specific lectin ... 69 1e-11
sp|Q8R4X3|RBM12_MOUSE RNA-binding protein 12 (RNA-binding m... 62 9e-10
sp|Q9Y6V0|PCLO_HUMAN Piccolo protein (Aczonin) 62 9e-10
sp|Q25434|FP1_MYTCO Adhesive plaque matrix protein precurso... 62 1e-09
sp|Q9M291|SC24C_ARATH Protein transport protein Sec24-like CEF 62 2e-09
sp|Q92125|ANXA7_XENLA Annexin A7 (Annexin VII) (Synexin) 62 2e-09
sp|P20073|ANXA7_HUMAN Annexin A7 (Annexin VII) (Synexin) 59 8e-09
sp|P08699|LEG3_RAT Galectin-3 (Galactose-specific lectin 3)... 58 2e-08
>sp|P35085|CBPA_DICDI Calcium-binding protein
Length = 467
Score = 73.2 bits (178), Expect = 5e-13
Identities = 67/175 (38%), Positives = 70/175 (40%), Gaps = 34/175 (19%)
Frame = +2
Query: 80 YPAQ------GNVYPVPGHVQPG-----GVYP---HGGYAPGVPHQPGMVYPP--AGQPG 211
YP Q N+ P PG QPG G YP G Y P P PG YPP GQPG
Sbjct: 46 YPPQQPGAPGSNLPPYPGTQQPGAPGAPGQYPPQQPGQYPPQQPGAPGQ-YPPQQPGQPG 104
Query: 212 M---------VYPP--AGQPGMIYPP--AGQPGMVCPPAGQPGMVYPSSGTHGGAYSAGQ 352
YPP GQPG YPP G PG P GQPG P G Y Q
Sbjct: 105 YPPQQPGQSGQYPPQQPGQPG--YPPQQPGAPGQYPPQQGQPGQYPPQQPGQPGQYPPQQ 162
Query: 353 PGM-NYSNPSQPGMVYPNAP--PGGMTYPQGGMTYPSGPSTGYNPGVPP--GSYP 502
G P QPG P P PG QG + PGVPP G+YP
Sbjct: 163 QGQYPPQQPGQPGAYPPQQPGQPGAYPPQQGVQNTLAKTGAPGQPGVPPPQGAYP 217
Score = 71.2 bits (173), Expect = 2e-12
Identities = 61/173 (35%), Positives = 68/173 (39%), Gaps = 33/173 (19%)
Frame = +2
Query: 83 PAQGNVYPVPGHVQPGGVYPHGGYA-----PGVPHQPGMVYPPA---GQPGM-----VYP 223
P Q YP QPG P G G P QPG+ P GQPG+ YP
Sbjct: 171 PGQPGAYPPQQPGQPGAYPPQQGVQNTLAKTGAPGQPGVPPPQGAYPGQPGVPPQQGAYP 230
Query: 224 PAGQPGMIYPPAGQPGMVCPPAGQPG--------MVYPSSGTHGGAYSAGQ---PGMNYS 370
P YPP GQPG PP GQPG + YP GAY Q PG +
Sbjct: 231 GQQPPMGAYPPQGQPGAY-PPQGQPGAYPPQQQQVAYPGQQPPMGAYPPQQGAYPGQQGA 289
Query: 371 NPSQPGM------VYPNAPPGGMTYP---QGGMTYPSGPSTGYNPGVPPGSYP 502
P Q G YP PP G YP Q G++ S + Y G PG P
Sbjct: 290 YPGQQGAYPGQQGAYPGQPPMG-AYPGQQQYGVSAYSQTTAAYQTGAYPGQTP 341
Score = 70.5 bits (171), Expect = 3e-12
Identities = 63/167 (37%), Positives = 64/167 (38%), Gaps = 26/167 (15%)
Frame = +2
Query: 80 YPAQGNVYPVPGHVQPG--GVYP-----HGGYAPGVPHQPGMVYPPAGQPGMVYPP--AG 232
YP Q P QPG G YP GY P P PG P GQPG YPP G
Sbjct: 95 YPPQQPGQPGYPPQQPGQSGQYPPQQPGQPGYPPQQPGAPGQYPPQQGQPGQ-YPPQQPG 153
Query: 233 QPGMI-------YPP--AGQPGMVCP-PAGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQ 382
QPG YPP GQPG P GQPG P G G PG P Q
Sbjct: 154 QPGQYPPQQQGQYPPQQPGQPGAYPPQQPGQPGAYPPQQGVQNTLAKTGAPGQPGVPPPQ 213
Query: 383 ---PGMVYPNAPPGGMTY----PQGGMTYPSGPSTGYNPGVPPGSYP 502
PG P PP Y P G P G Y P PG+YP
Sbjct: 214 GAYPGQ--PGVPPQQGAYPGQQPPMGAYPPQGQPGAYPPQGQPGAYP 258
Score = 57.0 bits (136), Expect = 4e-08
Identities = 56/146 (38%), Positives = 56/146 (38%), Gaps = 13/146 (8%)
Frame = +2
Query: 104 PVPGHVQPGGVYPHGGYAPGVPHQPGMVYPPA--GQPGMVYPPAGQPGMIYPPA-GQPGM 274
PV PG P PG P PG YPP G PG PP PG P A G PG
Sbjct: 21 PVKVMGTPGA--PGSQSTPGAPGAPGQ-YPPQQPGAPGSNLPP--YPGTQQPGAPGAPGQ 75
Query: 275 VCPPAGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGM--VYPNAPPGGMTYP--QGGM 442
P QPG P G Y QPG P QPG YP PG YP Q G
Sbjct: 76 Y--PPQQPGQYPPQQPGAPGQYPPQQPGQPGYPPQQPGQSGQYPPQQPGQPGYPPQQPGA 133
Query: 443 TYPSGPSTG----YNPGVP--PGSYP 502
P G Y P P PG YP
Sbjct: 134 PGQYPPQQGQPGQYPPQQPGQPGQYP 159
>sp|Q63627|SFR15_RAT Splicing factor, arginine/serine-rich 15 (CTD-binding SR-like
protein RA4)
Length = 1048
Score = 70.9 bits (172), Expect = 3e-12
Identities = 49/132 (37%), Positives = 54/132 (40%), Gaps = 5/132 (3%)
Frame = +2
Query: 125 PGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCPPAGQPGM 304
P G P G P P M P QPGM P QPG+ P QPGM P QPGM
Sbjct: 203 PNGQMPGFGLLSAPPPFPPMPQPGMPQPGMPQPGMPQPGLSQPGLPQPGMPQPGMPQPGM 262
Query: 305 VYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPST-----G 469
P QPG+ +QPGM P P GM PQ GM P P T
Sbjct: 263 PQP---------GMPQPGLAQPGLAQPGMPQPGMPQPGM--PQPGMPQPGMPPTPPVQPT 311
Query: 470 YNPGVPPGSYPH 505
+ P P + PH
Sbjct: 312 FQPTFQPQNEPH 323
Score = 45.8 bits (107), Expect = 9e-05
Identities = 54/164 (32%), Positives = 63/164 (38%), Gaps = 24/164 (14%)
Frame = +2
Query: 83 PAQGNVYPVPGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQPG---MVYPPA----GQPG 241
P G + P P P G+ P G+ PGVP P PP PG M PP G P
Sbjct: 604 PVVGALQP-PAFTPPLGI-PPPGFGPGVPPPPPPP-PPFWGPGFNPMHLPPGFLPPGPPP 660
Query: 242 MIYPPAGQPGMVCPPAGQPGMVYPSSGTHGGAY---------SAGQPGMNYSNPSQPGMV 394
I PP P PP P +V SG G A SAG P S P+ P +
Sbjct: 661 PITPPVSIPPPHTPPISIPNLV---SGARGNAESADSAKMYGSAGPPAAPTSLPTPP-VT 716
Query: 395 YPNAPPGGMTYPQGGMTYPSGPSTGY---NPGV-----PPGSYP 502
P + G G + PSTG PG+ PPG P
Sbjct: 717 QPVSLLGTQGVAPGPVIGLQAPSTGLLGGRPGLIPLQRPPGMPP 760
Score = 35.0 bits (79), Expect = 0.16
Identities = 34/103 (33%), Positives = 38/103 (36%)
Frame = +2
Query: 104 PVPGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCP 283
PVP P + P PHQPG A QP PP G P PP PG+ P
Sbjct: 579 PVPALPVPAPITVPPPQVP--PHQPGPPVVGALQPPAFTPPLGIP----PPGFGPGVPPP 632
Query: 284 PAGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPP 412
P P P G PG N + PG + P PP
Sbjct: 633 PPPPP----PFWG----------PGFNPMH-LPPGFLPPGPPP 660
Score = 32.3 bits (72), Expect = 1.0
Identities = 29/118 (24%), Positives = 34/118 (28%), Gaps = 25/118 (21%)
Frame = +2
Query: 224 PAGQPGMIYPPAGQPGMVCPPAGQPGMVYPSSGTHGGAYSAGQPGMNYS----------- 370
PA + P PP Q YP G AY+ Q +
Sbjct: 136 PAAATPAVAPAVPASSATSPPPPQAPFGYPGDGMQQPAYTQHQNVDQFQPRMMALQQDSM 195
Query: 371 --------NPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGY------NPGVPPGSYP 502
N PG +APP PQ GM P P G PG+P P
Sbjct: 196 QHQVPLPPNGQMPGFGLLSAPPPFPPMPQPGMPQPGMPQPGMPQPGLSQPGLPQPGMP 253
Score = 30.8 bits (68), Expect = 3.0
Identities = 24/80 (30%), Positives = 30/80 (37%), Gaps = 5/80 (6%)
Frame = +2
Query: 107 VPGHVQPGGVYPHGGYAPGVPHQPGMVY-----PPAGQPGMVYPPAGQPGMIYPPAGQPG 271
+P PG PH P +P +P + PP G G PP +PP G
Sbjct: 750 IPLQRPPGMPPPHLQRFPMMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGP-- 807
Query: 272 MVCPPAGQPGMVYPSSGTHG 331
P G PG+ P G G
Sbjct: 808 -FVRPGGMPGLGGPGPGPGG 826
>sp|P38486|LEG3_CANFA Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)
(IgE-binding protein) (35 kDa lectin) (Carbohydrate
binding protein 35) (CBP 35) (Laminin-binding protein)
(Lectin L-29)
Length = 296
Score = 68.9 bits (167), Expect = 1e-11
Identities = 53/143 (37%), Positives = 57/143 (39%), Gaps = 1/143 (0%)
Frame = +2
Query: 68 GGHMYPAQGNVYPVPGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMI 247
G YP PG PGG YP G P Q PP G PG PP G PG
Sbjct: 32 GAGGYPGASYPGAYPGQAPPGG-YPGQAPPGGYPGQA----PPGGYPGQA-PPGGYPGQA 85
Query: 248 YPPAGQPGMVCPPAGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTY 427
PP G PG PP G PG P GT+ G + PG P+ PG P P G Y
Sbjct: 86 -PPGGYPGQA-PPGGYPGQAPP--GTYPGPTAPAYPG-----PTAPG-TQPGQPSGPGAY 135
Query: 428 PQGGMTYPSGPSTGYNP-GVPPG 493
P G G P G+P G
Sbjct: 136 PPPGQPSAPGAYPAAGPFGIPAG 158
Score = 62.4 bits (150), Expect = 9e-10
Identities = 55/144 (38%), Positives = 58/144 (40%), Gaps = 10/144 (6%)
Frame = +2
Query: 101 YPVPGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVC 280
+P P QP G GGY PG YP A PG PP G PG PP G PG
Sbjct: 22 WPGPWGNQPAGA---GGY-------PGASYPGA-YPGQA-PPGGYPGQA-PPGGYPGQA- 67
Query: 281 PPAGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGM-------TYP-QG 436
PP G PG P G G A G PG APPGG TYP
Sbjct: 68 PPGGYPGQA-PPGGYPGQAPPGGYPG--------------QAPPGGYPGQAPPGTYPGPT 112
Query: 437 GMTYPSGPSTGYNPGVP--PGSYP 502
YP + G PG P PG+YP
Sbjct: 113 APAYPGPTAPGTQPGQPSGPGAYP 136
Score = 58.5 bits (140), Expect = 1e-08
Identities = 55/150 (36%), Positives = 60/150 (40%), Gaps = 5/150 (3%)
Frame = +2
Query: 80 YPAQGNVYPVPGHVQPGGV---YPHGGYAPGVPH--QPGMVYPPAGQPGMVYPPAGQPGM 244
YP Q PG PGG P GGY P PG PP G PG PP G PG
Sbjct: 45 YPGQAPPGGYPGQAPPGGYPGQAPPGGYPGQAPPGGYPGQA-PPGGYPGQA-PPGGYPGQ 102
Query: 245 IYPPAGQPGMVCPPAGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMT 424
PP PG P PG P GT G S PS PG YP A P G+
Sbjct: 103 A-PPGTYPGPTAP--AYPGPTAP--GTQPGQPSGPGAYPPPGQPSAPG-AYPAAGPFGI- 155
Query: 425 YPQGGMTYPSGPSTGYNPGVPPGSYPH*II 514
P G +T P Y+ +P G P +I
Sbjct: 156 -PAGPLTVP------YDLPLPGGVKPRMLI 178
>sp|Q8R4X3|RBM12_MOUSE RNA-binding protein 12 (RNA-binding motif protein 12) (SH3/WW
domain anchor protein in the nucleus) (SWAN)
Length = 1002
Score = 62.4 bits (150), Expect = 9e-10
Identities = 42/116 (36%), Positives = 47/116 (40%), Gaps = 1/116 (0%)
Frame = +2
Query: 158 PGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCPPAGQPGMVYPSSGTHGGA 337
PG P P V P AG P P AG PG P AG PG P +G PG P G G
Sbjct: 644 PGNPAVP--VIPSAGMPAAGIPTAGIPGAGLPSAGMPGAGMPSSGMPGPGMPGPGIPG-- 699
Query: 338 YSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGY-NPGVPPGSYP 502
AG PG P+ PG P G P M P+ P P +P + P
Sbjct: 700 --AGIPGPAMPGPAMPGPAMPGPAMPGPAMPGPAMPGPAMPGPAMPGPAIPGPAIP 753
Score = 55.8 bits (133), Expect = 9e-08
Identities = 45/145 (31%), Positives = 54/145 (37%), Gaps = 5/145 (3%)
Frame = +2
Query: 83 PAQGNV---YPVPGHVQPGGVYPHGGYAPGVPHQ--PGMVYPPAGQPGMVYPPAGQPGMI 247
PAQG VPG+ + G A G+P PG P AG PG P +G PG
Sbjct: 632 PAQGKKGLKISVPGNPAVPVIPSAGMPAAGIPTAGIPGAGLPSAGMPGAGMPSSGMPGPG 691
Query: 248 YPPAGQPGMVCPPAGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTY 427
P G PG P PG P G A PG P+ PG P G
Sbjct: 692 MPGPGIPGAGIPGPAMPGPAMPGPAMPGPA----MPGPAMPGPAMPGPAMPGPAMPGPAI 747
Query: 428 PQGGMTYPSGPSTGYNPGVPPGSYP 502
P + P+ P P +P + P
Sbjct: 748 PGPAIPGPAIP----GPAIPGPTIP 768
Score = 49.3 bits (116), Expect = 8e-06
Identities = 44/135 (32%), Positives = 51/135 (37%), Gaps = 8/135 (5%)
Frame = +2
Query: 107 VPGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCPP 286
+PG PG P G PG P PG P PG P PG P PG P
Sbjct: 707 MPGPAMPGPAMP-GPAMPG-PAMPGPAMPGPAMPGPAMPGPAIPGPAIPGPAIPGPAIPG 764
Query: 287 AGQPGMVYPSSG-------THGGAYSAGQPGMNY-SNPSQPGMVYPNAPPGGMTYPQGGM 442
PG PS+G T G + P N+ N P P PP G+ G +
Sbjct: 765 PTIPGAGIPSAGGEEHVFLTVGSKEANNGPPFNFPGNFGGPNAFGPPLPPPGLGGAFGDV 824
Query: 443 TYPSGPSTGYNPGVP 487
P PS G N G+P
Sbjct: 825 R-PVMPSVG-NSGLP 837
Score = 48.5 bits (114), Expect = 1e-05
Identities = 36/115 (31%), Positives = 38/115 (33%), Gaps = 4/115 (3%)
Frame = +2
Query: 107 VPGHVQPGGVYPHGGY----APGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGM 274
+PG P P G PG P PG P AG PG P PG P PG
Sbjct: 667 IPGAGLPSAGMPGAGMPSSGMPG-PGMPGPGIPGAGIPGPAMPGPAMPGPAMPGPAMPGP 725
Query: 275 VCPPAGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGG 439
P PG P G A PG P+ PG P G P G
Sbjct: 726 AMPGPAMPGPAMPGPAMPGPAI----PGPAIPGPAIPGPAIPGPTIPGAGIPSAG 776
Score = 30.0 bits (66), Expect = 5.1
Identities = 31/107 (28%), Positives = 42/107 (39%), Gaps = 6/107 (5%)
Frame = +2
Query: 86 AQGNVYPVPGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPP--- 256
A G+V PV V G+ G PG P + P+G G+ PG + P
Sbjct: 820 AFGDVRPVMPSVGNSGLPGLGLEVPGFGGAPNNISGPSGFGGIPQNFGNGPGSLNAPPGF 879
Query: 257 -AGQPGMVCPPA--GQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPG 388
+G PG+ P P P G G + G PG S+ +PG
Sbjct: 880 GSGPPGLGSVPGHLSGPPAFGPGPGP-GPIHIGGPPGFGASS-GKPG 924
>sp|Q9Y6V0|PCLO_HUMAN Piccolo protein (Aczonin)
Length = 5183
Score = 62.4 bits (150), Expect = 9e-10
Identities = 51/140 (36%), Positives = 57/140 (40%), Gaps = 9/140 (6%)
Frame = +2
Query: 110 PGHV--QPGGVYPHGGYAPGVPHQP-GMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVC 280
PGH QPG P P QP G+ P A QPG V PP PG PPA G
Sbjct: 319 PGHEKSQPGPAKP--------PAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAK 370
Query: 281 PPAGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYP---QGGMTYP 451
PPA Q G PSS G A PG+ + QPG P G P Q G+ P
Sbjct: 371 PPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSP 430
Query: 452 S---GPSTGYNPGVPPGSYP 502
+ GP+ PP P
Sbjct: 431 AKAPGPTKTPAQTKPPSQQP 450
Score = 60.5 bits (145), Expect = 4e-09
Identities = 42/111 (37%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +2
Query: 83 PAQGNVYPVPGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAG 262
P Q P P QPG P APG P PP+ QPG PP QPG P
Sbjct: 411 PTQQVGTPKPLAQQPGLQSP--AKAPGPTKTPAQTKPPSQQPGSTKPPPQQPGPAKPSPQ 468
Query: 263 QPGMVCPPAGQPGMVYPSSGTHGGAYSAGQPGMNYSNP-SQPGMVYPNAPP 412
QPG PP+ QPG PS+ A + Q ++ P SQ G P PP
Sbjct: 469 QPGSTKPPSQQPGSAKPSAQQPSPAKPSAQ---QFTKPVSQTGFGKPLQPP 516
Score = 53.5 bits (127), Expect = 4e-07
Identities = 45/136 (33%), Positives = 50/136 (36%), Gaps = 9/136 (6%)
Frame = +2
Query: 83 PAQGNVYPVPGHVQPGG---VYPHG-GYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIY 250
PAQ P QPG P G G P QPG PP Q G P A QPG+
Sbjct: 372 PAQQTGSEKPSSEQPGPKALAQPPGVGKTPA--QQPGPAKPPTQQVGTPKPLAQQPGLQS 429
Query: 251 P-----PAGQPGMVCPPAGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPG 415
P P P PP+ QPG P QPG +P QPG P +
Sbjct: 430 PAKAPGPTKTPAQTKPPSQQPGSTKP---------PPQQPGPAKPSPQQPGSTKPPSQQP 480
Query: 416 GMTYPQGGMTYPSGPS 463
G P P+ PS
Sbjct: 481 GSAKPSAQQPSPAKPS 496
Score = 45.8 bits (107), Expect = 9e-05
Identities = 37/114 (32%), Positives = 40/114 (35%), Gaps = 5/114 (4%)
Frame = +2
Query: 167 PHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCPPAGQPGMVYPSSGTHGGAYSA 346
P P PP QP PPA QPG QPG PPA G+ P + G
Sbjct: 296 PSLPSPSKPPIQQPTPGKPPAQQPG---HEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPP 352
Query: 347 GQPGMNYSNPSQP-GMVYPNAPPGGMTYPQGGMTYPSG----PSTGYNPGVPPG 493
QP P+QP G P A G P P P G P PG
Sbjct: 353 VQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPG 406
>sp|Q25434|FP1_MYTCO Adhesive plaque matrix protein precursor (Foot protein 1) (MCFP1)
Length = 872
Score = 62.0 bits (149), Expect = 1e-09
Identities = 44/143 (30%), Positives = 61/143 (42%), Gaps = 9/143 (6%)
Frame = +2
Query: 101 YPVPGHVQPG--GVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGM 274
YP P +P +Y P ++ YPP +P + YPP +P YPP+ +P +
Sbjct: 598 YPTPYKQKPSYPPIYKSKSSYP-TAYKSKKTYPPTYKPKITYPPTYKPKPSYPPSYRPKI 656
Query: 275 VCPPAGQPGMVYPSSGTHGGAYSAG-QPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYP 451
PP +P YP + G+Y QP Y +P YP ++YP T P
Sbjct: 657 TYPPTYKPKKSYPQAYKSKGSYPPSYQPKKTYPPSYKPKKTYPPTYKPKISYPPTYKTKP 716
Query: 452 SGPS-----TGYNPGVPPG-SYP 502
S P+ T Y P P SYP
Sbjct: 717 SYPASYKRKTSYPPTYKPKISYP 739
Score = 58.2 bits (139), Expect = 2e-08
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Frame = +2
Query: 152 YAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCPPAGQPGMVYPSSGTHG 331
Y P H+ + YPP +P + YPP + YPP+ +P PP +P + YP +
Sbjct: 130 YPPSYKHK--ITYPPTYKPKITYPPTYKQKPSYPPSYKPKTTYPPTYKPKITYPPTYKRK 187
Query: 332 GAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPPG-SYP 502
+Y+ +P Y +P + YP TY + P P T Y P P SYP
Sbjct: 188 PSYTPYKPKATYPPTYKPKITYP------PTYKRKPSYTPYKPKTTYPPTYKPKISYP 239
Score = 57.0 bits (136), Expect = 4e-08
Identities = 42/132 (31%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Frame = +2
Query: 104 PVPGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCP 283
P P + P P Y+P ++P + YPP +P YPP+ +P YPP +P + P
Sbjct: 364 PKPSY--PPSYKPKKTYSP--TYKPKITYPPTYKPKPSYPPSYKPKTTYPPTYKPKISYP 419
Query: 284 PAGQPGMVYPSSGTHGGAY-SAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGP 460
P +P Y SS Y +P ++Y +P YP +TYP PS P
Sbjct: 420 PTYKPKASYVSSYKSKKTYPPTYKPKISYPPTYKPKPSYPPTYKPKITYPPTYKPKPSYP 479
Query: 461 STGYNPGV--PP 490
T Y P + PP
Sbjct: 480 PT-YKPKITYPP 490
Score = 53.1 bits (126), Expect = 6e-07
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Frame = +2
Query: 170 HQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCPPAGQPGMVYPSSGTHGGAYSAG 349
++P YPP+ +P YPP +P + YPP +P PP +P + YP + +Y
Sbjct: 542 YKPKPSYPPSYKPKTTYPPTYKPKIRYPPTYKPKASYPPTYKPKITYPPTYKPKPSY--- 598
Query: 350 QPGMNYSNPSQPGMV-----YPNAPPGGMTYP---QGGMTYPSGPSTGYNPGVPPGSYP 502
P PS P + YP A TYP + +TYP P+ P PP P
Sbjct: 599 -PTPYKQKPSYPPIYKSKSSYPTAYKSKKTYPPTYKPKITYP--PTYKPKPSYPPSYRP 654
Score = 52.8 bits (125), Expect = 7e-07
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Frame = +2
Query: 170 HQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCPPAGQPGMVYPSSGTHGGAYSAG 349
++P + YPP +P YPP +P + YPP +P PP +P + YP + +Y
Sbjct: 442 YKPKISYPPTYKPKPSYPPTYKPKITYPPTYKPKPSYPPTYKPKITYPPTYKRKPSY--- 498
Query: 350 QPGMNYSNPSQPGMV-----YPNAPPGGMTYP---QGGMTYPSGPSTGYNPGVPPGSYP 502
P PS P + YP + TYP + +TYP P+ P PP P
Sbjct: 499 -PTPYKQKPSYPPIYKSKSSYPTSYKSKKTYPPTYKPKITYP--PTYKPKPSYPPSYKP 554
Score = 52.0 bits (123), Expect = 1e-06
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Frame = +2
Query: 170 HQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCPPAGQPGMVYPSSGTHGGAYSAG 349
++P + YPP +P YPP +P + YPP +P PP +P + YP + +Y
Sbjct: 262 YKPKISYPPTYKPKPSYPPTYKPKVTYPPTYKPKPSYPPTYKPKITYPPTYKPKPSY--- 318
Query: 350 QPGMNYSNPSQPGMV-----YPNAPPGGMTYP---QGGMTYPSGPSTGYNPGVPPGSYP 502
P PS P + YP + TYP + +TYP P+ P PP P
Sbjct: 319 -PTPYKQKPSYPPIYKSKSSYPTSYKSKKTYPPTYKPKITYP--PTYKPKPSYPPSYKP 374
Score = 49.7 bits (117), Expect = 6e-06
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Frame = +2
Query: 170 HQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCPPAGQPGMVYPSSGTHGGAY-SA 346
++P + YPP +P YPP+ +P Y P +P + PP +P YP S Y
Sbjct: 352 YKPKITYPPTYKPKPSYPPSYKPKKTYSPTYKPKITYPPTYKPKPSYPPSYKPKTTYPPT 411
Query: 347 GQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGV-PPGSYP 502
+P ++Y +P Y ++ TYP TY P Y P P SYP
Sbjct: 412 YKPKISYPPTYKPKASYVSSYKSKKTYPP---TYK--PKISYPPTYKPKPSYP 459
Score = 49.3 bits (116), Expect = 8e-06
Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 15/132 (11%)
Frame = +2
Query: 152 YAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQ---------PGMVCPPAGQPGM 304
Y P +P YPP+ +P YPP +P + YPP + P PP +P +
Sbjct: 150 YPPTYKQKPS--YPPSYKPKTTYPPTYKPKITYPPTYKRKPSYTPYKPKATYPPTYKPKI 207
Query: 305 VYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYP---QGGMTYPS--GPSTG 469
YP + +Y+ +P Y +P + YP+ +Y + TYP P
Sbjct: 208 TYPPTYKRKPSYTPYKPKTTYPPTYKPKISYPSIYKPKASYVSSYKSKKTYPPTYKPKIS 267
Query: 470 YNPGV-PPGSYP 502
Y P P SYP
Sbjct: 268 YPPTYKPKPSYP 279
Score = 49.3 bits (116), Expect = 8e-06
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = +2
Query: 140 PHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCPPAGQPGMVYPS 316
P YA ++P + YPP +P + YPP +P + YPP +P + PPA +P + YPS
Sbjct: 814 PKPSYASS--YKPKITYPPTYKPKISYPPTYKPKITYPPTYKPKISYPPAYKPKISYPS 870
Score = 47.4 bits (111), Expect = 3e-05
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Frame = +2
Query: 188 YPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCPPAGQPGMVYPSSGTHGGAY-SAGQPGMN 364
YPP +P + YPP +P YPP +P + PP +P YP + Y +P +
Sbjct: 258 YPPTYKPKISYPPTYKPKPSYPPTYKPKVTYPPTYKPKPSYPPTYKPKITYPPTYKPKPS 317
Query: 365 YSNPSQPGMVYPNAPPGGMTYP---QGGMTYPS--GPSTGYNPGV-PPGSYP 502
Y P + YP +YP + TYP P Y P P SYP
Sbjct: 318 YPTPYKQKPSYPPIYKSKSSYPTSYKSKKTYPPTYKPKITYPPTYKPKPSYP 369
Score = 43.5 bits (101), Expect = 4e-04
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +2
Query: 140 PHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCPPAGQPGMVYPSS 319
P YA ++P + YPP +P Y + +P + YPP +P + +P + YP +
Sbjct: 754 PKPSYASS--YKPKIRYPPTYKPKPSYASSYKPKIRYPPTYKPKPSYASSYKPKIRYPPT 811
Query: 320 GTHGGAY-SAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPPG- 493
+Y S+ +P + Y +P + YP +TYP TY P Y P P
Sbjct: 812 YKPKPSYASSYKPKITYPPTYKPKISYPPTYKPKITYPP---TYK--PKISYPPAYKPKI 866
Query: 494 SYP 502
SYP
Sbjct: 867 SYP 869
Score = 42.0 bits (97), Expect = 0.001
Identities = 44/164 (26%), Positives = 58/164 (35%), Gaps = 30/164 (18%)
Frame = +2
Query: 101 YPVPGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQP--------------------GMVY 220
YP P +P G YP Y P + YPP +P Y
Sbjct: 75 YPAP--YKPKGYYPTKRYQPTYGSKTN--YPPIYKPIAKKLSSYKAIKTTYPAYKAKTSY 130
Query: 221 PPAGQPGMIYPPAGQPGMVCPPAGQPGMVYPSSGTHGGAY-SAGQPGMNYS--------- 370
PP+ + + YPP +P + PP + YP S Y +P + Y
Sbjct: 131 PPSYKHKITYPPTYKPKITYPPTYKQKPSYPPSYKPKTTYPPTYKPKITYPPTYKRKPSY 190
Query: 371 NPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPPGSYP 502
P +P YP +TYP TY PS Y P P +YP
Sbjct: 191 TPYKPKATYPPTYKPKITYPP---TYKRKPS--YTPYKPKTTYP 229
Score = 42.0 bits (97), Expect = 0.001
Identities = 32/131 (24%), Positives = 48/131 (36%), Gaps = 20/131 (15%)
Frame = +2
Query: 167 PHQPGMVYPPAGQPGM--------------------VYPPAGQPGMIYPPAGQPGMVCPP 286
P++P YPP +P + YPP +P + YPP +P PP
Sbjct: 221 PYKPKTTYPPTYKPKISYPSIYKPKASYVSSYKSKKTYPPTYKPKISYPPTYKPKPSYPP 280
Query: 287 AGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPST 466
+P + YP + +P +Y +P + YP +YP PS P
Sbjct: 281 TYKPKVTYPPT---------YKPKPSYPPTYKPKITYPPTYKPKPSYPTPYKQKPSYPPI 331
Query: 467 GYNPGVPPGSY 499
+ P SY
Sbjct: 332 YKSKSSYPTSY 342
Score = 41.6 bits (96), Expect = 0.002
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +2
Query: 125 PGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCPPAGQPGM 304
P P Y P ++P YPP +P + YPP + YP + + PP +P +
Sbjct: 679 PPSYQPKKTYPPS--YKPKKTYPPTYKPKISYPPTYKTKPSYPASYKRKTSYPPTYKPKI 736
Query: 305 VYPSSGTHGGAY-SAGQPGMNYSNPSQPGMVYP 400
YPS+ +Y +P +Y++ +P + YP
Sbjct: 737 SYPSTYKAKPSYPPTYKPKPSYASSYKPKIRYP 769
Score = 41.2 bits (95), Expect = 0.002
Identities = 24/88 (27%), Positives = 42/88 (47%)
Frame = +2
Query: 140 PHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCPPAGQPGMVYPSS 319
P YA ++P + YPP +P Y + +P + YPP +P + PP +P + YP +
Sbjct: 794 PKPSYASS--YKPKIRYPPTYKPKPSYASSYKPKITYPPTYKPKISYPPTYKPKITYPPT 851
Query: 320 GTHGGAYSAGQPGMNYSNPSQPGMVYPN 403
+P ++Y +P + YP+
Sbjct: 852 ---------YKPKISYPPAYKPKISYPS 870
>sp|Q9M291|SC24C_ARATH Protein transport protein Sec24-like CEF
Length = 1097
Score = 61.6 bits (148), Expect = 2e-09
Identities = 61/183 (33%), Positives = 76/183 (41%), Gaps = 35/183 (19%)
Frame = +2
Query: 56 MAKHGGHMYPAQGNVYPVPGH--VQPGGVYPHGGYAPGVP--------HQPGMVYPPAGQ 205
MA+ GG +Q +P G P P GG P QPG +P +G
Sbjct: 95 MARPGGPPQVSQPGGFPPVGRPVAPPSNQPPFGGRPSTGPLVGGGSSFPQPGG-FPASGP 153
Query: 206 PGMVYPPAGQP------GMIYPPAGQPGM-VCPPAGQPGMVY----PSSGTHGGAYS--- 343
PG V P+G P G PP PGM + PP+G PG P SG HGG S
Sbjct: 154 PGGV--PSGPPSGARPIGFGSPPPMGPGMSMPPPSGMPGGPLSNGPPPSGMHGGHLSNGP 211
Query: 344 --AGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYP---------SGPSTGYNPGVPP 490
+G PG SN P M+ P A P G + G M P +GP TG +P P
Sbjct: 212 PPSGMPGGTLSNGPPPPMMGPGAFPRGSQFTSGPMMAPPPPYGQPPNAGPFTGNSPLSSP 271
Query: 491 GSY 499
++
Sbjct: 272 PAH 274
Score = 46.6 bits (109), Expect = 5e-05
Identities = 41/118 (34%), Positives = 48/118 (40%), Gaps = 3/118 (2%)
Frame = +2
Query: 158 PGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCPPAGQPGMVYPSSGTHGGA 337
PG P M P G P V P G +PP G+P V PP+ QP GG
Sbjct: 87 PGPPPPAAMARP--GGPPQVSQPGG-----FPPVGRP--VAPPSNQPPF--------GGR 129
Query: 338 YSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNP---GVPPGSYP 502
S G S+ QPG + PPGG+ PSGP +G P G PP P
Sbjct: 130 PSTGPLVGGGSSFPQPGGFPASGPPGGV---------PSGPPSGARPIGFGSPPPMGP 178
Score = 38.9 bits (89), Expect = 0.011
Identities = 44/145 (30%), Positives = 51/145 (35%), Gaps = 12/145 (8%)
Frame = +2
Query: 65 HGGHMYPAQGNVYPVPGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQ----PGMVYPPA- 229
HGGH+ N P G PGG +G P P +P Q P M PP
Sbjct: 203 HGGHL----SNGPPPSG--MPGGTLSNG---PPPPMMGPGAFPRGSQFTSGPMMAPPPPY 253
Query: 230 GQPGMIYPPAGQPGMVCPPAGQ-------PGMVYPSSGTHGGAYSAGQPGMNYSNPSQPG 388
GQP P G + PPA PG+ Y GG P S P PG
Sbjct: 254 GQPPNAGPFTGNSPLSSPPAHSIPAPTNFPGVPYGRPPMPGGFPYGAPPQQLPSAPGTPG 313
Query: 389 MVYPNAPPGGMTYPQGGMTYPSGPS 463
+Y P + MT S PS
Sbjct: 314 SIYGMGPMQNQS-----MTSVSSPS 333
>sp|Q92125|ANXA7_XENLA Annexin A7 (Annexin VII) (Synexin)
Length = 512
Score = 61.6 bits (148), Expect = 2e-09
Identities = 52/152 (34%), Positives = 58/152 (38%), Gaps = 4/152 (2%)
Frame = +2
Query: 59 AKHGGHMYPAQGNVYPVPGHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQP 238
A GG PA G P PGG YPH G P PG + G PG P GQ
Sbjct: 38 AAGGGAFPPASGGGNAPP----PGGGYPHAGGYPAPGGYPGGMPSYPGAPGFGAPAGGQ- 92
Query: 239 GMIYPPAGQPGMVCPPAGQPGMVYPSSGTHGGAYSAG----QPGMNYSNPSQPGMVYPNA 406
G PP G P P G PG P+ G GA +AG P Y +P +
Sbjct: 93 GYGAPP-GAPAYGVPGYGGPGFNAPAGGY--GAPNAGGFGVPPAGGYGSPGGAPGYGGFS 149
Query: 407 PPGGMTYPQGGMTYPSGPSTGYNPGVPPGSYP 502
P +Y GG G G PG P YP
Sbjct: 150 QPSSQSYGAGGPGQMPGQMPGQMPGQAPSGYP 181
Score = 58.9 bits (141), Expect = 1e-08
Identities = 56/143 (39%), Positives = 60/143 (41%), Gaps = 22/143 (15%)
Frame = +2
Query: 137 YPHGGYAPGVPHQPG--MVYPPAGQ---PGMVYPPAGQPGMIYPPAGQPGMVCPPAGQPG 301
YP G PG P PG YPPA Q PG +PPA G +PPA G PP G
Sbjct: 5 YPSG--FPGYPGYPGGDPSYPPAAQQAFPGGQFPPAAGGG-AFPPASGGGNAPPPGGG-- 59
Query: 302 MVYPSSGTHGGAYSA--GQPGMNYSNPSQPGMVYP------NAPPGGMTYPQGGMTYP-- 451
YP H G Y A G PG S P PG P APPG Y G P
Sbjct: 60 --YP----HAGGYPAPGGYPGGMPSYPGAPGFGAPAGGQGYGAPPGAPAYGVPGYGGPGF 113
Query: 452 SGPSTGYNP------GVPP-GSY 499
+ P+ GY GVPP G Y
Sbjct: 114 NAPAGGYGAPNAGGFGVPPAGGY 136
Score = 31.2 bits (69), Expect = 2.3
Identities = 19/53 (35%), Positives = 21/53 (39%)
Frame = +2
Query: 347 GQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPPGSYPH 505
G PG +PS P P G GG +P S G N P G YPH
Sbjct: 11 GYPGYPGGDPSYPPAAQQAFPGGQFPPAAGGGAFPPA-SGGGNAPPPGGGYPH 62
>sp|P20073|ANXA7_HUMAN Annexin A7 (Annexin VII) (Synexin)
Length = 488
Score = 59.3 bits (142), Expect = 8e-09
Identities = 60/142 (42%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Frame = +2
Query: 137 YPHGGYAP-GVPHQPGMVYPPAGQPGMVYPPAGQPGMIYP-PAGQPGM------VCPPAG 292
YP GY P G P PG YPPAGQ +PP+GQ YP P+G P M P +G
Sbjct: 3 YP--GYPPTGYPPFPG--YPPAGQESS-FPPSGQ----YPYPSGFPPMGGGAYPQVPSSG 53
Query: 293 QPGMV-YPSSGTH---GGAYSAGQPGMNYSNPSQPGMVYPNAPPG-GMTYPQGG---MTY 448
PG YP+ G + GG A QPG PS YP PPG G P GG Y
Sbjct: 54 YPGAGGYPAPGGYPAPGGYPGAPQPG---GAPS-----YPGVPPGQGFGVPPGGAGFSGY 105
Query: 449 PSGPSTGYNPG---VP-PGSYP 502
P PS Y G VP PG +P
Sbjct: 106 PQPPSQSYGGGPAQVPLPGGFP 127
Score = 43.5 bits (101), Expect = 4e-04
Identities = 43/107 (40%), Positives = 45/107 (42%), Gaps = 11/107 (10%)
Frame = +2
Query: 68 GGHMYP-AQGNVYPVPGHVQPGGVYPHGGYAPGVPHQPGMV--YP--PAGQPGMVYPP-- 226
GG YP + YP G G YP G PG P QPG YP P GQ G PP
Sbjct: 42 GGGAYPQVPSSGYPGAGGYPAPGGYPAPGGYPGAP-QPGGAPSYPGVPPGQ-GFGVPPGG 99
Query: 227 AGQPGMIYPPA----GQPGMVCPPAGQPGMVYPSSGTHGGAYSAGQP 355
AG G PP+ G P V P G PG PS Y GQP
Sbjct: 100 AGFSGYPQPPSQSYGGGPAQVPLPGGFPGGQMPSQ------YPGGQP 140
>sp|P08699|LEG3_RAT Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)
(IgE-binding protein) (35 kDa lectin) (Carbohydrate
binding protein 35) (CBP 35) (Laminin-binding protein)
(Lectin L-29)
Length = 262
Score = 58.2 bits (139), Expect = 2e-08
Identities = 56/151 (37%), Positives = 67/151 (44%), Gaps = 4/151 (2%)
Frame = +2
Query: 113 GHVQPGGVYPHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAGQPGMVCPPAG 292
G+ P G G PG PG YP A PG PP G PG PP+ PG P A
Sbjct: 15 GNPNPQGWPGAWGNQPGAGGYPGASYPGA-YPGQA-PPGGYPGQA-PPSAYPGPTGPSA- 70
Query: 293 QPGMVYPSS---GTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPS 463
PG P + T GA+ GQPG + PS PG YP+AP G G P+GP
Sbjct: 71 YPGPTAPGAYPGPTAPGAF-PGQPGGPGAYPSAPG-AYPSAP--GAYPATGPFGAPTGPL 126
Query: 464 T-GYNPGVPPGSYPH*IIVSELLTEMNDNLI 553
T Y+ +P G P +I + N N I
Sbjct: 127 TVPYDMPLPGGVMPRMLITIIGTVKPNANSI 157
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,972,532
Number of Sequences: 369166
Number of extensions: 2344960
Number of successful extensions: 15095
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12070
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5023626210
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)