Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_005_N10
(845 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein) 271 1e-72
sp|O35186|CATK_RAT Cathepsin K precursor 270 3e-72
sp|Q9GLE3|CATK_PIG Cathepsin K precursor 270 3e-72
sp|P61277|CATK_MACMU Cathepsin K precursor >gi|47117667|sp|... 268 1e-71
sp|P55097|CATK_MOUSE Cathepsin K precursor 267 2e-71
sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precu... 267 3e-71
sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (C... 265 9e-71
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 263 5e-70
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 262 8e-70
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 260 4e-69
>sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein)
Length = 329
Score = 271 bits (694), Expect = 1e-72
Identities = 135/275 (49%), Positives = 181/275 (65%), Gaps = 4/275 (1%)
Frame = +1
Query: 31 LNDDWESYKIKFGKKYES-LNEISRRLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADM 207
L+ WE +K + K+Y S ++EISRRLIWE NLK+I HN+E+ LG HTY L +NH DM
Sbjct: 22 LDTQWELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDM 81
Query: 208 TNEEFRAKY--LSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWS 381
T+EE K L VPPSR + P G+ PD++D+R +GYVTPVKNQ QCGSCW+
Sbjct: 82 TSEEVVQKMTGLKVPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWA 141
Query: 382 FSATGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMDNAFEYIEKF-GIESED 558
FS+ G+LEGQ +KTG L + S Q LVD M NAF+Y+++ GI+SED
Sbjct: 142 FSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENYGCGGGY--MTNAFQYVQRNRGIDSED 199
Query: 559 AYPYTAEDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVGPISVAIDASNYSFQLY 738
AYPY +D +C+Y+ + C GY +IP G+E +L A A VGP+SVAIDAS SFQ Y
Sbjct: 200 AYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFY 259
Query: 739 KSGIYNEPDCSSTQLDHGVLVVGYGTEDGSNYWLV 843
G+Y + +CSS ++H VL VGYG + G+ +W++
Sbjct: 260 SKGVYYDENCSSDNVNHAVLAVGYGIQKGNKHWII 294
>sp|O35186|CATK_RAT Cathepsin K precursor
Length = 329
Score = 270 bits (691), Expect = 3e-72
Identities = 135/275 (49%), Positives = 181/275 (65%), Gaps = 4/275 (1%)
Frame = +1
Query: 31 LNDDWESYKIKFGKKYES-LNEISRRLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADM 207
L+ WE +K GK+Y S ++EISRRLIWE NLK I HN+E+ LG HTY L +NH DM
Sbjct: 22 LDTQWELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDM 81
Query: 208 TNEEFRAKY--LSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWS 381
T+EE K L VPPSR + P+ G++PD++D+R +GYVTPVKNQ QCGSCW+
Sbjct: 82 TSEEVVQKMTGLRVPPSRSFSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWA 141
Query: 382 FSATGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMDNAFEYIEKFG-IESED 558
FS+ G+LEGQ +KTG L + S Q LVD M AF+Y+++ G I+SED
Sbjct: 142 FSSAGALEGQLKKKTGKLLALSPQNLVDCVSENYGCGGGY--MTTAFQYVQQNGGIDSED 199
Query: 559 AYPYTAEDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVGPISVAIDASNYSFQLY 738
AYPY +D +C+Y+ + C GY +IP G+E +L A A VGP+SV+IDAS SFQ Y
Sbjct: 200 AYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFY 259
Query: 739 KSGIYNEPDCSSTQLDHGVLVVGYGTEDGSNYWLV 843
G+Y + +C ++H VLVVGYGT+ G+ YW++
Sbjct: 260 SRGVYYDENCDRDNVNHAVLVVGYGTQKGNKYWII 294
>sp|Q9GLE3|CATK_PIG Cathepsin K precursor
Length = 330
Score = 270 bits (691), Expect = 3e-72
Identities = 135/275 (49%), Positives = 179/275 (65%), Gaps = 4/275 (1%)
Frame = +1
Query: 31 LNDDWESYKIKFGKKYES-LNEISRRLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADM 207
L+ WE +K + K+Y S ++EISRRLIWE NLK+I HN+E+ LG HTY L +NH DM
Sbjct: 23 LDTQWELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDM 82
Query: 208 TNEEFRAKY--LSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWS 381
T+EE K L VPPS + + P G+ PD++D+R +GYVTPVKNQ QCGSCW+
Sbjct: 83 TSEEVVQKMTGLKVPPSHSRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWA 142
Query: 382 FSATGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMDNAFEYIEKF-GIESED 558
FS+ G+LEGQ +KTG L + S Q LVD M NAF+Y++K GI+SED
Sbjct: 143 FSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGY--MTNAFQYVQKNRGIDSED 200
Query: 559 AYPYTAEDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVGPISVAIDASNYSFQLY 738
AYPY +D C+Y+ + C GY +IP G+E +L A A VGP+SVAIDAS SFQ Y
Sbjct: 201 AYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFY 260
Query: 739 KSGIYNEPDCSSTQLDHGVLVVGYGTEDGSNYWLV 843
G+Y + +C+S L+H VL VGYG + G +W++
Sbjct: 261 SKGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWII 295
>sp|P61277|CATK_MACMU Cathepsin K precursor
sp|P61276|CATK_MACFA Cathepsin K precursor
Length = 329
Score = 268 bits (686), Expect = 1e-71
Identities = 136/275 (49%), Positives = 178/275 (64%), Gaps = 4/275 (1%)
Frame = +1
Query: 31 LNDDWESYKIKFGKKYES-LNEISRRLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADM 207
L+ WE +K K+Y S ++EISRRLIWE NLKYI HN+E+ LG HTY L +NH DM
Sbjct: 22 LDTHWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDM 81
Query: 208 TNEEFRAKY--LSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWS 381
TNEE K L VP S + + P G+ PD+VD+R +GYVTPVKNQ QCGSCW+
Sbjct: 82 TNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWA 141
Query: 382 FSATGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMDNAFEYIEKF-GIESED 558
FS+ G+LEGQ +KTG L + S Q LVD M NAF+Y++K GI+SED
Sbjct: 142 FSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGY--MTNAFQYVQKNRGIDSED 199
Query: 559 AYPYTAEDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVGPISVAIDASNYSFQLY 738
AYPY ++ +C+Y+ + C GY +IP G+E +L A A VGP+SVAIDAS SFQ Y
Sbjct: 200 AYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFY 259
Query: 739 KSGIYNEPDCSSTQLDHGVLVVGYGTEDGSNYWLV 843
G+Y + C+S L+H VL VGYG + G+ +W++
Sbjct: 260 SKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWII 294
>sp|P55097|CATK_MOUSE Cathepsin K precursor
Length = 329
Score = 267 bits (683), Expect = 2e-71
Identities = 134/275 (48%), Positives = 180/275 (65%), Gaps = 4/275 (1%)
Frame = +1
Query: 31 LNDDWESYKIKFGKKYES-LNEISRRLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADM 207
L+ WE +K K+Y S ++EISRRLIWE NLK I HN+E+ LG HTY L +NH DM
Sbjct: 22 LDTQWELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDM 81
Query: 208 TNEEFRAKY--LSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWS 381
T+EE K L +PPSR + P+ G++PD++D+R +GYVTPVKNQ QCGSCW+
Sbjct: 82 TSEEVVQKMTGLRIPPSRSYSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWA 141
Query: 382 FSATGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMDNAFEYIEKFG-IESED 558
FS+ G+LEGQ +KTG L + S Q LVD M AF+Y+++ G I+SED
Sbjct: 142 FSSAGALEGQLKKKTGKLLALSPQNLVDCVTENYGCGGGY--MTTAFQYVQQNGGIDSED 199
Query: 559 AYPYTAEDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVGPISVAIDASNYSFQLY 738
AYPY +D +C+Y+ + C GY +IP G+E +L A A VGPISV+IDAS SFQ Y
Sbjct: 200 AYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFY 259
Query: 739 KSGIYNEPDCSSTQLDHGVLVVGYGTEDGSNYWLV 843
G+Y + +C ++H VLVVGYGT+ GS +W++
Sbjct: 260 SRGVYYDENCDRDNVNHAVLVVGYGTQKGSKHWII 294
>sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precursor
Length = 323
Score = 267 bits (682), Expect = 3e-71
Identities = 135/269 (50%), Positives = 175/269 (65%), Gaps = 2/269 (0%)
Frame = +1
Query: 43 WESYKIKFGKKYESLNEIS-RRLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADMTNEE 219
WE +K K+G++Y E S RR+I+E N KYI++ N + + G+ T+ L +N F DMT EE
Sbjct: 20 WEHFKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEE 79
Query: 220 FRAKYLSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWSFSATGS 399
F A P R +VF K G VDWRT+G VTPVK+Q QCGSCW+FS TGS
Sbjct: 80 FNAVMKGNIPRRSAPVSVFYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGS 139
Query: 400 LEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMDNAFEYIE-KFGIESEDAYPYTA 576
LEGQHF KTG+L S +EQQLVD M++AF+YI+ GI++E AYPY A
Sbjct: 140 LEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEA 199
Query: 577 EDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVGPISVAIDASNYSFQLYKSGIYN 756
DG+C +D + V +C+G+ +I GSET L A +GPISV IDA++ SFQ Y SG+Y
Sbjct: 200 RDGSCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYY 259
Query: 757 EPDCSSTQLDHGVLVVGYGTEDGSNYWLV 843
EP CS + LDH VL VGYG+E G ++WLV
Sbjct: 260 EPSCSPSYLDHAVLAVGYGSEGGQDFWLV 288
>sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (Cathepsin X) (Cathepsin O2)
Length = 329
Score = 265 bits (678), Expect = 9e-71
Identities = 134/275 (48%), Positives = 179/275 (65%), Gaps = 4/275 (1%)
Frame = +1
Query: 31 LNDDWESYKIKFGKKYES-LNEISRRLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADM 207
L+ WE +K K+Y + ++EISRRLIWE NLKYI HN+E+ LG HTY L +NH DM
Sbjct: 22 LDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDM 81
Query: 208 TNEEFRAKY--LSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWS 381
T+EE K L VP S + + P+ G+ PD+VD+R +GYVTPVKNQ QCGSCW+
Sbjct: 82 TSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWA 141
Query: 382 FSATGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMDNAFEYIEKF-GIESED 558
FS+ G+LEGQ +KTG L + S Q LVD M NAF+Y++K GI+SED
Sbjct: 142 FSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGY--MTNAFQYVQKNRGIDSED 199
Query: 559 AYPYTAEDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVGPISVAIDASNYSFQLY 738
AYPY ++ +C+Y+ + C GY +IP G+E +L A A VGP+SVAIDAS SFQ Y
Sbjct: 200 AYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFY 259
Query: 739 KSGIYNEPDCSSTQLDHGVLVVGYGTEDGSNYWLV 843
G+Y + C+S L+H VL VGYG + G+ +W++
Sbjct: 260 SKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWII 294
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 263 bits (672), Expect = 5e-70
Identities = 140/276 (50%), Positives = 171/276 (61%), Gaps = 5/276 (1%)
Frame = +1
Query: 31 LNDDWESYKIKFGKKYESLNEISRRLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADMT 210
L+ W +K + Y + E RR +WE N+K I+ HN E GKH +T+ +N F DMT
Sbjct: 25 LDTKWYQWKATHRRLYGANEEGWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMT 84
Query: 211 NEEFRAKYLSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWSFSA 390
NEEFR + + VF P + LP +VDWR +GYVTPVKNQ+QCGSCW+FSA
Sbjct: 85 NEEFRQMMGCFRNQKFRKGKVFREPLFLD-LPKSVDWRKKGYVTPVKNQKQCGSCWAFSA 143
Query: 391 TGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMDNAFEYI-EKFGIESEDAYP 567
TG+LEGQ FRKTG L S SEQ LVD M AF+Y+ E G++SE++YP
Sbjct: 144 TGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYP 203
Query: 568 YTAEDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVGPISVAIDASNYSFQLYKSG 747
Y A D C Y V + TG+ + G E +L A ATVGPISVA+DA + SFQ YKSG
Sbjct: 204 YVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSG 263
Query: 748 IYNEPDCSSTQLDHGVLVVGYGTE----DGSNYWLV 843
IY EPDCSS LDHGVLVVGYG E + S YWLV
Sbjct: 264 IYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLV 299
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 262 bits (670), Expect = 8e-70
Identities = 139/276 (50%), Positives = 172/276 (62%), Gaps = 5/276 (1%)
Frame = +1
Query: 31 LNDDWESYKIKFGKKYESLNEISRRLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADMT 210
LN W +K + Y E RR +WE N+K I+ HN E GKH +T+ +N F DMT
Sbjct: 25 LNAQWYQWKATHRRLYGMNEEGWRRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMT 84
Query: 211 NEEFRAKYLSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWSFSA 390
NEEFR + K +F P ++P +VDWR +GYVTPVKNQ QCGSCW+FSA
Sbjct: 85 NEEFRQVMNGFQNQKHKKGKMFQEPL-FAEIPKSVDWREKGYVTPVKNQGQCGSCWAFSA 143
Query: 391 TGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMDNAFEYI-EKFGIESEDAYP 567
TG+LEGQ FRKTG L S SEQ LVD LMDNAF Y+ + G++SE++YP
Sbjct: 144 TGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYP 203
Query: 568 YTAED-GTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVGPISVAIDASNYSFQLYKS 744
Y D TC Y + TG+VD+P E +L A AT+GPISVAIDA + SFQ YKS
Sbjct: 204 YLGRDTETCNYKPECSAANDTGFVDLP-QREKALMKAVATLGPISVAIDAGHQSFQFYKS 262
Query: 745 GIYNEPDCSSTQLDHGVLVVGY---GTEDGSNYWLV 843
GIY +PDCSS LDHGVLVVGY GT+ + +W+V
Sbjct: 263 GIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIV 298
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 260 bits (664), Expect = 4e-69
Identities = 139/276 (50%), Positives = 172/276 (62%), Gaps = 5/276 (1%)
Frame = +1
Query: 31 LNDDWESYKIKFGKKYESLNEISRRLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADMT 210
L W +K + Y E RR +WE N+K I+ HN E GKH++T+ +N F DMT
Sbjct: 25 LEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMT 84
Query: 211 NEEFRAKYLSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWSFSA 390
+EEFR + + VF P + P +VDWR +GYVTPVKNQ QCGSCW+FSA
Sbjct: 85 SEEFRQVMNGFQNRKPRKGKVFQEPL-FYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSA 143
Query: 391 TGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMDNAFEYI-EKFGIESEDAYP 567
TG+LEGQ FRKTG L S SEQ LVD LMD AF+Y+ + G++SE++YP
Sbjct: 144 TGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYP 203
Query: 568 YTAEDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVGPISVAIDASNYSFQLYKSG 747
Y A + +C Y+ V + TG+VDIP E +L A ATVGPISVAIDA + SF YK G
Sbjct: 204 YEATEESCKYNPKYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFLFYKEG 262
Query: 748 IYNEPDCSSTQLDHGVLVVGYGTE----DGSNYWLV 843
IY EPDCSS +DHGVLVVGYG E D + YWLV
Sbjct: 263 IYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLV 298
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.314 0.131 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,932,937
Number of Sequences: 369166
Number of extensions: 1927116
Number of successful extensions: 4973
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4517
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8293644780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)