Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dr_sW_005_M01 (849 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P42932|TCPQ_MOUSE T-complex protein 1, theta subunit (TC... 285 1e-76 sp|P50990|TCPQ_HUMAN T-complex protein 1, theta subunit (TC... 283 4e-76 sp|P47079|TCPQ_YEAST T-complex protein 1, theta subunit (TC... 241 1e-63 sp|P78921|TCPQ_SCHPO Probable T-complex protein 1, theta su... 241 2e-63 sp|P47828|TCPQ_CANAL T-complex protein 1, theta subunit (TC... 173 6e-43 sp|O24735|THSB_SULTO Thermosome beta subunit (Thermosome su... 114 3e-25 sp|Q58405|THS_METJA Thermosome subunit (Chaperonin subunit) 112 1e-24 sp|P28488|THSB_SULSH Thermosome beta subunit (Thermosome su... 110 5e-24 sp|Q9V2T4|THSB_SULAC Thermosome beta subunit (Thermosome su... 110 5e-24 sp|O24731|THSA_THEK8 Thermosome alpha subunit (Thermosome s... 109 8e-24
>sp|P42932|TCPQ_MOUSE T-complex protein 1, theta subunit (TCP-1-theta) (CCT-theta) Length = 548 Score = 285 bits (729), Expect = 1e-76 Identities = 140/270 (51%), Positives = 200/270 (74%) Frame = +3 Query: 39 LLKMGLSVPDVTEGFEIAAKHSLEILKDLVIGKVEDLREKEMIKKIVGTAVNSKIFGEES 218 LL++GLSV +V G+EIA K + EIL +LV ++LR+ + + ++ T++ SK +G E+ Sbjct: 118 LLRIGLSVSEVISGYEIACKKAHEILPELVCCSAKNLRDVDEVSSLLRTSIMSKQYGSET 177 Query: 219 HISDLVVDACIRALPTSSFFNVDNIRVVKILGSGTNASKVFNGMVFVREAQSVIKECKAA 398 ++ L+ AC+ P S FNVDNIRV KILGSG +S V +GMVF +E + + K A Sbjct: 178 FLAKLIAQACVSIFPDSGNFNVDNIRVCKILGSGIYSSSVLHGMVFKKETEGDVTSVKDA 237 Query: 399 KVVVFSCPFDQLQTETKGTVLINTAKELMDFSRGEEDQMEERVREIAETGCKVIVTGGKV 578 K+ V+SCPFD + TETKGTVLI TA+ELM+FS+GEE+ M+ +V+ IA TG VIVTGGKV Sbjct: 238 KIAVYSCPFDGMITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIAGTGANVIVTGGKV 297 Query: 579 GELALHYANKYNLMVVKLSSKFDIRRVCKVTGATPIPKLSTPTQEELGYIASVRTEEIGK 758 ++ALHYANKYN+M+V+L+SK+D+RR+CK GAT +PKL+ P QEE+G+ SV E+G Sbjct: 298 ADIALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPKLTPPVQEEMGHCDSVYLSEVGD 357 Query: 759 SAVVLFDQDVKEGAISSIVVRGSMYDVMDE 848 + VV+F + ++GAIS+IV+RGS ++MD+ Sbjct: 358 TQVVVFKHEKEDGAISTIVLRGSTDNLMDD 387
>sp|P50990|TCPQ_HUMAN T-complex protein 1, theta subunit (TCP-1-theta) (CCT-theta) sp|Q5RAP1|TCPQ_PONPY T-complex protein 1, theta subunit (TCP-1-theta) (CCT-theta) Length = 548 Score = 283 bits (724), Expect = 4e-76 Identities = 137/270 (50%), Positives = 201/270 (74%) Frame = +3 Query: 39 LLKMGLSVPDVTEGFEIAAKHSLEILKDLVIGKVEDLREKEMIKKIVGTAVNSKIFGEES 218 LL++GLSV +V EG+EIA + + EIL +LV ++LR+ + + ++ T++ SK +G E Sbjct: 118 LLRIGLSVSEVIEGYEIACRKAHEILPNLVCCSAKNLRDIDEVSSLLRTSIMSKQYGNEV 177 Query: 219 HISDLVVDACIRALPTSSFFNVDNIRVVKILGSGTNASKVFNGMVFVREAQSVIKECKAA 398 ++ L+ AC+ P S FNVDNIRV KILGSG ++S V +GMVF +E + + K A Sbjct: 178 FLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGISSSSVLHGMVFKKETEGDVTSVKDA 237 Query: 399 KVVVFSCPFDQLQTETKGTVLINTAKELMDFSRGEEDQMEERVREIAETGCKVIVTGGKV 578 K+ V+SCPFD + TETKGTVLI TA+ELM+FS+GEE+ M+ +V+ IA+TG V+VTGGKV Sbjct: 238 KIAVYSCPFDGMITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGKV 297 Query: 579 GELALHYANKYNLMVVKLSSKFDIRRVCKVTGATPIPKLSTPTQEELGYIASVRTEEIGK 758 ++ALHYANKYN+M+V+L+SK+D+RR+CK GAT +P+L+ P EE+G+ SV E+G Sbjct: 298 ADMALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPRLTPPVLEEMGHCDSVYLSEVGD 357 Query: 759 SAVVLFDQDVKEGAISSIVVRGSMYDVMDE 848 + VV+F + ++GAIS+IV+RGS ++MD+ Sbjct: 358 TQVVVFKHEKEDGAISTIVLRGSTDNLMDD 387
>sp|P47079|TCPQ_YEAST T-complex protein 1, theta subunit (TCP-1-theta) (CCT-theta) Length = 568 Score = 241 bits (616), Expect = 1e-63 Identities = 123/280 (43%), Positives = 189/280 (67%), Gaps = 10/280 (3%) Frame = +3 Query: 39 LLKMGLSVPDVTEGFEIAAKHSLEILKDLVIGKVEDLREKEMIKKIVGTAVNSKIFGEES 218 L+ MGLS ++ +G+ +A K +L+ L ++V+G++ D +K + K++ ++SK +G E Sbjct: 117 LISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSED 176 Query: 219 HISDLVVDACIRALPTSS------FFNVDNIRVVKILGSGTNASKVFNGMVFVREAQSVI 380 +S+LV +A LP + +FNVD+IRVVKI+G + S V GMVF RE + + Sbjct: 177 ILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREPEGHV 236 Query: 381 K---ECKAAKVVVFSCPFDQLQTETKGTVLINTAKELMDFSRGEEDQMEERVREIAETGC 551 K E K KV VF+CP D TETKGTVL++ A+E++DFS+GEE Q++ ++EIA+ G Sbjct: 237 KSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGV 296 Query: 552 KVIVTGGKVGELALHYANKYNLMVVKLSSKFDIRRVCKVTGATPIPKLSTPTQEELGYIA 731 + IV G VGELALHY N+Y ++V+K+ SKF++RR+C+V GATP+P+L PT EELG + Sbjct: 297 ECIVAGAGVGELALHYLNRYGILVLKVPSKFELRRLCRVCGATPLPRLGAPTPEELGLVE 356 Query: 732 SVRTEEIGKSAVVLFDQDVKE-GAISSIVVRGSMYDVMDE 848 +V+T EIG V +F Q+ E S+I++RG+ + +D+ Sbjct: 357 TVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDD 396
>sp|P78921|TCPQ_SCHPO Probable T-complex protein 1, theta subunit (TCP-1-theta) (CCT-theta) Length = 546 Score = 241 bits (615), Expect = 2e-63 Identities = 116/271 (42%), Positives = 183/271 (67%), Gaps = 1/271 (0%) Frame = +3 Query: 39 LLKMGLSVPDVTEGFEIAAKHSLEILKDLVIGKVEDLREKEMIKKIVGTAVNSKIFGEES 218 +++MGL+ ++ +G+E+A H++E+L+++ K+E + ++ + K + T ++SK +G E Sbjct: 117 MIRMGLTPLEIAKGYEMALSHTMEVLEEICADKIETVESEKELIKAIRTCISSKQYGNED 176 Query: 219 HISDLVVDACIRALPTS-SFFNVDNIRVVKILGSGTNASKVFNGMVFVREAQSVIKECKA 395 +SDLV A + LP S FNVDNIRVVKI+GS S+V GMVF RE + + K Sbjct: 177 FLSDLVAKAILTVLPKDPSKFNVDNIRVVKIMGSSLYNSQVVKGMVFprePEGTVTRSKE 236 Query: 396 AKVVVFSCPFDQLQTETKGTVLINTAKELMDFSRGEEDQMEERVREIAETGCKVIVTGGK 575 AKV VFSCP D QTETKGTVL++ A+E++DFS+GEE+ +E ++EI + G +V+VT G Sbjct: 237 AKVAVFSCPLDISQTETKGTVLLHNAQEMLDFSKGEENLIESHIKEIYDAGVRVVVTSGN 296 Query: 576 VGELALHYANKYNLMVVKLSSKFDIRRVCKVTGATPIPKLSTPTQEELGYIASVRTEEIG 755 V +L LHY N++ ++V+++ SKF++RR+C+V GATP+ ++ P EE+G + V T EIG Sbjct: 297 VNDLVLHYLNRFEILVIRVPSKFELRRLCRVVGATPLARMGVPMPEEMGSVDVVETIEIG 356 Query: 756 KSAVVLFDQDVKEGAISSIVVRGSMYDVMDE 848 V +F Q ++IV+RG+ +D+ Sbjct: 357 GDRVTVFRQVEDITRTATIVLRGATKTYLDD 387
>sp|P47828|TCPQ_CANAL T-complex protein 1, theta subunit (TCP-1-theta) (CCT-theta) Length = 540 Score = 173 bits (438), Expect = 6e-43 Identities = 99/271 (36%), Positives = 157/271 (57%), Gaps = 1/271 (0%) Frame = +3 Query: 39 LLKMGLSVPDVTEGFEIAAKHSLEILKDLVIGKVEDLREKEMIKKIVGTAVNSKIFGEES 218 LL +GL+V ++ +GF +A K ++ L +LV+ KVE E +++K V + +K +G E Sbjct: 117 LLTLGLNVSEIIQGFNLANKFVMKTLDELVVEKVESF-ETDLLKA-VKPVIAAKQYGVED 174 Query: 219 HISDLVVDACIRALPTSSFFNVDNIRVVKILGSGTNASKVFNGMVFVREAQSVIKECKAA 398 I+ LVVDA + SF NVDNIRVVK++G+ + S+V GMVF RE + +K Sbjct: 175 TIAKLVVDAVALVMKNGSF-NVDNIRVVKVMGASLSQSQVVKGMVFprePEGTVKNADQI 233 Query: 399 KVVVFSCPFDQLQTETKGTVLINTA-KELMDFSRGEEDQMEERVREIAETGCKVIVTGGK 575 + P + +T ++ + R + + R+ G + ++ G Sbjct: 234 QSCRVYQPHRYFHHRNQRYSCSSTMPRKCLISPRAKNNSWTSCARKSTIQGLRWLLPGSS 293 Query: 576 VGELALHYANKYNLMVVKLSSKFDIRRVCKVTGATPIPKLSTPTQEELGYIASVRTEEIG 755 VGELALHY NKY ++V+++ SKFD+RR+C+V GATP+P+L PT +E+G I + T+EIG Sbjct: 294 VGELALHYLNKYGILVLRVPSKFDLRRICQVCGATPLPRLGAPTPDEMGEIDIIETKEIG 353 Query: 756 KSAVVLFDQDVKEGAISSIVVRGSMYDVMDE 848 V +F QD ++IVVRG+ + +D+ Sbjct: 354 GDRVTIFRQDESSSRTATIVVRGATQNNLDD 384
>sp|O24735|THSB_SULTO Thermosome beta subunit (Thermosome subunit 2) (Chaperonin beta subunit) Length = 552 Score = 114 bits (285), Expect = 3e-25 Identities = 68/266 (25%), Positives = 140/266 (52%), Gaps = 6/266 (2%) Frame = +3 Query: 69 VTEGFEIAAKHSLEILKDLVIGKVEDLREKEMIKKIVGTAVNSK-IFGEESHISDLVVDA 245 + GF+ A + +L+ +++ I + + + +++KK+ T++NSK + G +++D+V A Sbjct: 131 IVSGFKKAEEQALKTIEE--IAQKVSVNDMDILKKVAMTSLNSKAVAGAREYLADIVAKA 188 Query: 246 CIRALPTSS---FFNVDNIRVVKILGSGTNASKVFNGMVFVREA--QSVIKECKAAKVVV 410 + + ++DNI++VK G N +++ G+V +E + K + AK+ + Sbjct: 189 VTQVAELRGDRWYVDLDNIQIVKKHGGSINDTQIIYGIVVDKEVVHPGMPKRVENAKIAL 248 Query: 411 FSCPFDQLQTETKGTVLINTAKELMDFSRGEEDQMEERVREIAETGCKVIVTGGKVGELA 590 + + E + IN ++ F EE+ ++E+V +IA TG V++ + E+A Sbjct: 249 LDASLEVEKPELDAEIRINDPTQMKKFLEEEENLLKEKVDKIAATGANVVICQKGIDEVA 308 Query: 591 LHYANKYNLMVVKLSSKFDIRRVCKVTGATPIPKLSTPTQEELGYIASVRTEEIGKSAVV 770 HY K ++ V+ + K D+ ++ + TG + + T ++LGY A V ++G+ +V Sbjct: 309 QHYLAKKGILAVRRAKKSDLEKLARATGGRVVSNIDELTPQDLGYAALVEERKVGEDKMV 368 Query: 771 LFDQDVKEGAISSIVVRGSMYDVMDE 848 F + K SI++RG + V+DE Sbjct: 369 -FVEGAKNPKAVSILIRGGLERVVDE 393
>sp|Q58405|THS_METJA Thermosome subunit (Chaperonin subunit) Length = 542 Score = 112 bits (281), Expect = 1e-24 Identities = 81/277 (29%), Positives = 141/277 (50%), Gaps = 7/277 (2%) Frame = +3 Query: 39 LLKMGLSVPDVTEGFEIAAKHSLEILKDLVIGKVEDLREKEMIKKIVGTAVNSKIFGEES 218 LL + + G+E+A ++E LK I K + EM+KKI T++ K G E Sbjct: 113 LLDQNIHPSVIINGYEMARNKAVEELKS--IAKEVKPEDTEMLKKIAMTSITGK--GAEK 168 Query: 219 ---HISDLVVDACIRALPTSSFFNVDN--IRVVKILGSGTNASKVFNGMVFVREAQS--V 377 ++++VV+A +RA+ VD I+V K G+ +K+ G+V +E + + Sbjct: 169 AREQLAEIVVEA-VRAVVDEETGKVDKDLIKVEKKEGAPIEETKLIRGVVIDKERVNPQM 227 Query: 378 IKECKAAKVVVFSCPFDQLQTETKGTVLINTAKELMDFSRGEEDQMEERVREIAETGCKV 557 K+ + AK+ + +CP + +TET + I +LM+F EE +++ V +IA TG V Sbjct: 228 PKKVENAKIALLNCPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANV 287 Query: 558 IVTGGKVGELALHYANKYNLMVVKLSSKFDIRRVCKVTGATPIPKLSTPTQEELGYIASV 737 + + +LA HY K ++ V+ K D+ ++ K TGA + K+ T E+LG V Sbjct: 288 VFCQKGIDDLAQHYLAKKGILAVRRVKKSDMEKLAKATGARIVTKIDDLTPEDLGEAGLV 347 Query: 738 RTEEIGKSAVVLFDQDVKEGAISSIVVRGSMYDVMDE 848 ++ A++ +Q K +I+ RGS V++E Sbjct: 348 EERKVAGDAMIFVEQ-CKHPKAVTILARGSTEHVVEE 383
>sp|P28488|THSB_SULSH Thermosome beta subunit (Thermosome subunit 2) (Chaperonin beta subunit) (Thermophilic factor 55 beta) (TF55-beta) (Ring complex beta subunit) Length = 552 Score = 110 bits (275), Expect = 5e-24 Identities = 68/266 (25%), Positives = 140/266 (52%), Gaps = 6/266 (2%) Frame = +3 Query: 69 VTEGFEIAAKHSLEILKDLVIGKVEDLREKEMIKKIVGTAVNSK-IFGEESHISDLVVDA 245 + G++ A + +L+ ++D I + + + ++++K+ T++ SK + G +++DLVV A Sbjct: 130 IVSGYKKAEEIALKTIQD--IAQPVSINDTDVLRKVALTSLGSKAVAGAREYLADLVVKA 187 Query: 246 CIRALPTSS---FFNVDNIRVVKILGSGTNASKVFNGMVFVREA--QSVIKECKAAKVVV 410 + + ++DN+++VK G N +++ G+V +E + K + AK+ + Sbjct: 188 VAQVAELRGDKWYVDLDNVQIVKKHGGSINDTQLVYGIVVDKEVVHPGMPKRIENAKIAL 247 Query: 411 FSCPFDQLQTETKGTVLINTAKELMDFSRGEEDQMEERVREIAETGCKVIVTGGKVGELA 590 + + E + IN ++ F EE+ ++E+V +IA TG V++ + E+A Sbjct: 248 LDASLEVEKPELDAEIRINDPTQMHKFLEEEENILKEKVDKIAATGANVVICQKGIDEVA 307 Query: 591 LHYANKYNLMVVKLSSKFDIRRVCKVTGATPIPKLSTPTQEELGYIASVRTEEIGKSAVV 770 HY K ++ V+ + K D+ ++ + TG I + T ++LGY A V ++G+ +V Sbjct: 308 QHYLAKKGILAVRRAKKSDLEKLARATGGRVISNIDELTSQDLGYAALVEERKVGEDKMV 367 Query: 771 LFDQDVKEGAISSIVVRGSMYDVMDE 848 F + K SI++RG + V+DE Sbjct: 368 -FVEGAKNPKSVSILIRGGLERVVDE 392
>sp|Q9V2T4|THSB_SULAC Thermosome beta subunit (Thermosome subunit 2) (Chaperonin beta subunit) (Thermophilic factor 55 beta) (TF55-beta) Length = 553 Score = 110 bits (275), Expect = 5e-24 Identities = 65/266 (24%), Positives = 140/266 (52%), Gaps = 6/266 (2%) Frame = +3 Query: 69 VTEGFEIAAKHSLEILKDLVIGKVEDLREKEMIKKIVGTAVNSK-IFGEESHISDLVVDA 245 + G++ A + +++ +++ I + + E+++K+ T+++SK + G H++D+VV A Sbjct: 131 IVSGYKKAEEMAIKTIEE--ISTKVSVNDTEILRKVALTSLSSKAVAGAREHLADIVVKA 188 Query: 246 CIRALPTSS---FFNVDNIRVVKILGSGTNASKVFNGMVFVREA--QSVIKECKAAKVVV 410 + + ++DN+++VK G N +++ G++ +E + K + AK+ + Sbjct: 189 ITQVAELRGDKWYVDLDNVQIVKKHGGSINDTQIVYGIIVDKEVVHPGMPKRVENAKIAL 248 Query: 411 FSCPFDQLQTETKGTVLINTAKELMDFSRGEEDQMEERVREIAETGCKVIVTGGKVGELA 590 + + E + IN ++ F EE+ ++E+V +IA+TG V++ + E+A Sbjct: 249 LDASLEVEKPELDAEIRINDPTQMKKFLDEEENILKEKVDKIAQTGANVVICQKGIDEVA 308 Query: 591 LHYANKYNLMVVKLSSKFDIRRVCKVTGATPIPKLSTPTQEELGYIASVRTEEIGKSAVV 770 HY K ++ V+ + K D+ ++ + TG + + T ++LGY V +IG+ +V Sbjct: 309 QHYLAKKGILAVRRAKKSDLEKLARATGGRVVSNIDELTSQDLGYATLVEERKIGEDKMV 368 Query: 771 LFDQDVKEGAISSIVVRGSMYDVMDE 848 F + K SI++RG + V+DE Sbjct: 369 -FIEGAKNPKAVSILIRGGLERVVDE 393
>sp|O24731|THSA_THEK8 Thermosome alpha subunit (Thermosome subunit 1) (Chaperonin alpha subunit) Length = 549 Score = 109 bits (273), Expect = 8e-24 Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 8/278 (2%) Frame = +3 Query: 39 LLKMGLSVPDVTEGFEIAAKHSLEILKDLVIGKVEDLREKEMIKKIVGTAVNSKIFGEES 218 LL + + +G+ +AA+ + EIL+++ I D ++E + +I T++ K ES Sbjct: 114 LLDQNIHPSIIIKGYALAAEKAQEILEEIAIKVNPD--DEETLLRIAMTSITGK--NAES 169 Query: 219 H---ISDLVVDACIRALPTSS---FFNVDNIRVVKILGSGTNASKVFNGMVFVREA--QS 374 H ++ L VDA + ++DNI+ K G G S++ G+V +E Sbjct: 170 HKELLAKLAVDAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPR 229 Query: 375 VIKECKAAKVVVFSCPFDQLQTETKGTVLINTAKELMDFSRGEEDQMEERVREIAETGCK 554 + K + AK+ + + + +TET + I + +LM F EE +++ V IA+TG Sbjct: 230 MPKRVEGAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGAN 289 Query: 555 VIVTGGKVGELALHYANKYNLMVVKLSSKFDIRRVCKVTGATPIPKLSTPTQEELGYIAS 734 V+ + +LA HY KY +M V+ K D+ ++ K TGA + + T E+LGY Sbjct: 290 VVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEI 349 Query: 735 VRTEEIGKSAVVLFDQDVKEGAISSIVVRGSMYDVMDE 848 V ++ ++ F + K +I++RG V+DE Sbjct: 350 VEERKLAGENMI-FVEGCKNPKAVTILIRGGTEHVIDE 386
Database: Non-redundant SwissProt sequences Posted date: Dec 6, 2005 7:40 AM Number of letters in database: 68,354,980 Number of sequences in database: 184,735 Database: swissprot.01 Posted date: Dec 6, 2005 8:18 AM Number of letters in database: 66,202,850 Number of sequences in database: 184,431 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,280,424 Number of Sequences: 369166 Number of extensions: 1681171 Number of successful extensions: 5337 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 5043 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5279 length of database: 68,354,980 effective HSP length: 109 effective length of database: 48,218,865 effective search space used: 8341863645 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)