Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_005_L08
(852 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8R5C5|ACTY_MOUSE Beta-centractin (Actin-related protein... 464 e-130
sp|P42025|ACTY_HUMAN Beta-centractin (Actin-related protein... 463 e-130
sp|P61164|ACTZ_MOUSE Alpha-centractin (Centractin) (Centros... 456 e-128
sp|P45889|ACTZ_DROME Actin-like protein 87C 447 e-125
sp|P42023|ACTZ_PNECA Actin-2 (Actin II) (Centractin-like pr... 381 e-105
sp|P38673|ACTZ_NEUCR Actin-like protein (Centractin) 363 e-100
sp|P53498|ACT_CHLRE Actin 327 2e-89
sp|P11426|ACT_ENTHI Actin 327 2e-89
sp|P53500|ACT_CYAME Actin 327 3e-89
sp|P53496|ACT11_ARATH Actin-11 326 4e-89
>sp|Q8R5C5|ACTY_MOUSE Beta-centractin (Actin-related protein 1B) (ARP1B)
Length = 376
Score = 464 bits (1195), Expect = e-130
Identities = 223/283 (78%), Positives = 248/283 (87%)
Frame = +2
Query: 2 NQPVVIDNGSGVIKAGFAGATTPKIHFPNYIGRPKHKRVMAGALEGDTFIGPKAEEHRGL 181
NQPVVIDNGSGVIKAGFAG PK FPNY+GRPKH RVMAGALEGD FIGPKAEEHRGL
Sbjct: 9 NQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGL 68
Query: 182 MNIRYPMEHGVVQDWNDMEKIWSYIYGPEQLKTSSEEHPVLLTEAPLNPLKNREKAAEIF 361
+ IRYPMEHGVV+DWNDME+IW Y+Y +QL+T SEEHPVLLTEAPLNP KNREKAAE+F
Sbjct: 69 LTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVF 128
Query: 362 FETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMRTDIAGR 541
FETFNVPAL+ISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFA+ H+IMR DIAGR
Sbjct: 129 FETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGR 188
Query: 542 DVSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQSEIDNTTYPLPDGSK 721
DVSRYLRLLLRKEG F TSAEFE+VR +KE+AC+LS NP+ E E + Y LPDGS
Sbjct: 189 DVSRYLRLLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQYTLPDGST 248
Query: 722 LRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLR 850
L +G A+FRAPELLF+PDL+G E +G+HEVLA++I KSDMDLR
Sbjct: 249 LDVGPARFRAPELLFQPDLVGDESEGLHEVLAFAIHKSDMDLR 291
>sp|P42025|ACTY_HUMAN Beta-centractin (Actin-related protein 1B) (ARP1B)
Length = 376
Score = 463 bits (1192), Expect = e-130
Identities = 222/283 (78%), Positives = 248/283 (87%)
Frame = +2
Query: 2 NQPVVIDNGSGVIKAGFAGATTPKIHFPNYIGRPKHKRVMAGALEGDTFIGPKAEEHRGL 181
NQPVVIDNGSGVIKAGFAG PK FPNY+GRPKH RVMAGALEGD FIGPKAEEHRGL
Sbjct: 9 NQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGL 68
Query: 182 MNIRYPMEHGVVQDWNDMEKIWSYIYGPEQLKTSSEEHPVLLTEAPLNPLKNREKAAEIF 361
+ IRYPMEHGVV+DWNDME+IW Y+Y +QL+T SEEHPVLLTEAPLNP KNREKAAE+F
Sbjct: 69 LTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVF 128
Query: 362 FETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMRTDIAGR 541
FETFNVPAL+ISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFA+ H+IMR DIAGR
Sbjct: 129 FETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGR 188
Query: 542 DVSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQSEIDNTTYPLPDGSK 721
DVSRYLRLLLRKEG F TSAEFE+VR +KE+AC+LS NP+ E E + Y LPDGS
Sbjct: 189 DVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQYTLPDGST 248
Query: 722 LRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLR 850
L +G A+FRAPELLF+PDL+G E +G+HEV+A++I KSDMDLR
Sbjct: 249 LDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLR 291
>sp|P61164|ACTZ_MOUSE Alpha-centractin (Centractin) (Centrosome-associated actin homolog)
(Actin-RPV) (ARP1)
sp|P61163|ACTZ_HUMAN Alpha-centractin (Centractin) (Centrosome-associated actin homolog)
(Actin-RPV) (ARP1)
sp|P61162|ACTZ_CANFA Alpha-centractin (Centractin) (Centrosome-associated actin homolog)
(Actin-RPV) (ARP1)
Length = 376
Score = 456 bits (1174), Expect = e-128
Identities = 219/283 (77%), Positives = 248/283 (87%)
Frame = +2
Query: 2 NQPVVIDNGSGVIKAGFAGATTPKIHFPNYIGRPKHKRVMAGALEGDTFIGPKAEEHRGL 181
NQPVVIDNGSGVIKAGFAG PK FPNY+GRPKH RVMAGALEGD FIGPKAEEHRGL
Sbjct: 9 NQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGL 68
Query: 182 MNIRYPMEHGVVQDWNDMEKIWSYIYGPEQLKTSSEEHPVLLTEAPLNPLKNREKAAEIF 361
++IRYPMEHG+V+DWNDME+IW Y+Y +QL+T SEEHPVLLTEAPLNP KNRE+AAE+F
Sbjct: 69 LSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVF 128
Query: 362 FETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMRTDIAGR 541
FETFNVPAL+ISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFA+ H+IMR DIAGR
Sbjct: 129 FETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGR 188
Query: 542 DVSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQSEIDNTTYPLPDGSK 721
DVSR+LRL LRKEG F +S+EFEIV+ +KE+AC+LS NP+ E E + Y LPDGS
Sbjct: 189 DVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQYYLPDGST 248
Query: 722 LRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLR 850
+ IG ++FRAPELLFRPDLIG E +GIHEVL ++IQKSDMDLR
Sbjct: 249 IEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLR 291
>sp|P45889|ACTZ_DROME Actin-like protein 87C
Length = 376
Score = 447 bits (1150), Expect = e-125
Identities = 211/283 (74%), Positives = 243/283 (85%)
Frame = +2
Query: 2 NQPVVIDNGSGVIKAGFAGATTPKIHFPNYIGRPKHKRVMAGALEGDTFIGPKAEEHRGL 181
NQPVVIDNGSGVIKAGFAG PK FPNYIGRPKH RVMAGALEGD F+GPKAEEHRGL
Sbjct: 9 NQPVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGL 68
Query: 182 MNIRYPMEHGVVQDWNDMEKIWSYIYGPEQLKTSSEEHPVLLTEAPLNPLKNREKAAEIF 361
++IRYPMEHG+V DWNDME+IWSYIY EQL T +E+HPVLLTEAPLNP +NREKAAE F
Sbjct: 69 LSIRYPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFF 128
Query: 362 FETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMRTDIAGR 541
FE N PAL++SMQAVLSLYATGR TGVVLDSGDGVTHAVPIYEGFA+ H+IMR DIAGR
Sbjct: 129 FEGINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGR 188
Query: 542 DVSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQSEIDNTTYPLPDGSK 721
DV+RYL+ L+R+EG +F+++AEFEIVR +KEK C+L+ NP+ +E E + Y LPDG
Sbjct: 189 DVTRYLKTLIRREGFNFRSTAEFEIVRSIKEKVCYLATNPQKEETVETEKFAYKLPDGKI 248
Query: 722 LRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLR 850
IG A+FRAPE+LFRPDL+G EC+GIH+VL YSI+KSDMDLR
Sbjct: 249 FEIGPARFRAPEVLFRPDLLGEECEGIHDVLMYSIEKSDMDLR 291
>sp|P42023|ACTZ_PNECA Actin-2 (Actin II) (Centractin-like protein)
Length = 385
Score = 381 bits (978), Expect = e-105
Identities = 188/294 (63%), Positives = 233/294 (79%), Gaps = 11/294 (3%)
Frame = +2
Query: 2 NQPVVIDNGSGVIKAGFAGATTPKIHFPNYIGRPKHKRVMAGALEGDTFIGPKAEEHRGL 181
NQP+ IDNGSGVIKAGFAG PK FP+Y+GRPKH ++MAGA+EGD FIG KA+E RGL
Sbjct: 9 NQPICIDNGSGVIKAGFAGEDQPKSFFPSYVGRPKHLKIMAGAIEGDIFIGNKAQELRGL 68
Query: 182 MNIRYPMEHGVVQDWNDMEKIWSYIYGPEQLKTSSEEHPVLLTEAPLNPLKNREKAAEIF 361
+ I+YP+EHG+V DW+DME+IW +IY E+LKT SEEHPVLLTEAPLNP NR++AA++F
Sbjct: 69 LKIKYPIEHGIVVDWDDMERIWQFIY-TEELKTVSEEHPVLLTEAPLNPRTNRDQAAQVF 127
Query: 362 FETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMRTDIAGR 541
FETFNVPAL+ S+QAVLSLYA+GRTTGVVLDSGDGVTHAVPIYEGFA+ AI R DIAGR
Sbjct: 128 FETFNVPALFTSIQAVLSLYASGRTTGVVLDSGDGVTHAVPIYEGFAMPSAIRRIDIAGR 187
Query: 542 DVSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQSEID----------- 688
DV+ YL+LLLRK GT F TSAE EIVR +KEK +++ +P +E+ I+
Sbjct: 188 DVTEYLQLLLRKSGTIFHTSAEKEIVRIIKEKCSYVTLDPRKEEKEWINASISGGKDYTK 247
Query: 689 NTTYPLPDGSKLRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLR 850
+ LPDG+ LR+G +FRAPE+LF P++IGSE GIH+V+ +I + D+DLR
Sbjct: 248 EEEFKLPDGNVLRLGAERFRAPEILFDPEIIGSEYSGIHQVVVDAISRVDLDLR 301
>sp|P38673|ACTZ_NEUCR Actin-like protein (Centractin)
Length = 380
Score = 363 bits (933), Expect = e-100
Identities = 178/291 (61%), Positives = 229/291 (78%), Gaps = 8/291 (2%)
Frame = +2
Query: 2 NQPVVIDNGSGVIKAGFAGATTPKIHFPNYIGRPKHKRVMAGALEGDTFIGPKA-EEHRG 178
N P+V+DNGSG I+AGFAG PK HFP+++GRPKH RV+AGALEG+ FIG KA E RG
Sbjct: 7 NAPIVLDNGSGTIRAGFAGDDVPKCHFPSFVGRPKHLRVLAGALEGEVFIGQKAASELRG 66
Query: 179 LMNIRYPMEHGVVQDWNDMEKIWSYIYGPEQLKTSSEEHPVLLTEAPLNPLKNREKAAEI 358
L+ IRYP+EHG+V DW+DMEKIW+Y+Y E LKT SEEHPVLLTE PLNP NR+ AA+I
Sbjct: 67 LLKIRYPLEHGIVTDWDDMEKIWAYVYD-EGLKTLSEEHPVLLTEPPLNPRANRDTAAQI 125
Query: 359 FFETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMRTDIAG 538
FETFNVPALY S+QAVLSLYA+GRTTGVVLDSGDGV+HAVP+Y+GF + ++I R D+AG
Sbjct: 126 LFETFNVPALYTSIQAVLSLYASGRTTGVVLDSGDGVSHAVPVYQGFTVPNSIRRIDVAG 185
Query: 539 RDVSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQ----SEIDN---TT 697
RDV+ YL+ LLRK G F TSAE E+VR +KE +++ +P +E+ +++D
Sbjct: 186 RDVTEYLQTLLRKSGYVFHTSAEKEVVRLIKESVTYVAHDPRKEEKEWAAAKMDPAKIAE 245
Query: 698 YPLPDGSKLRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLR 850
Y LPDG+KL+IG +FRAPE+LF P++IG E G+H+++ SI ++D+DLR
Sbjct: 246 YVLPDGNKLKIGAERFRAPEILFDPEIIGLEYPGVHQIVVDSINRTDLDLR 296
>sp|P53498|ACT_CHLRE Actin
Length = 377
Score = 327 bits (839), Expect = 2e-89
Identities = 155/284 (54%), Positives = 212/284 (74%), Gaps = 4/284 (1%)
Frame = +2
Query: 11 VVIDNGSGVIKAGFAGATTPKIHFPNYIGRPKHKRVMAGALEGDTFIGPKAEEHRGLMNI 190
+V DNGSG++KAGFAG P+ FP+ +GRP+H VM G + D+++G +A+ RG++ +
Sbjct: 10 LVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTL 69
Query: 191 RYPMEHGVVQDWNDMEKIWSYIYGPEQLKTSSEEHPVLLTEAPLNPLKNREKAAEIFFET 370
RYP+EHG+V +W+DMEKIW + + E L+ + EEHPVLLTEAPLNP NREK +I FET
Sbjct: 70 RYPIEHGIVTNWDDMEKIWHHTFFNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 128
Query: 371 FNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMRTDIAGRDVS 550
FNVPA+Y+++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+AL HAI+R D+AGRD++
Sbjct: 129 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 188
Query: 551 RYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQSEIDNT----TYPLPDGS 718
YL +L + G F T+AE EIVR +KEK C+++ + E + + + ++ TY LPDG
Sbjct: 189 DYLMKILMERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATALSSSALEKTYELPDGQ 248
Query: 719 KLRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLR 850
+ IG +FR PE+LF P++IG E GIH+ SI K D+D+R
Sbjct: 249 MITIGNERFRCPEVLFNPNMIGMEAVGIHDTTFNSIMKCDVDIR 292
>sp|P11426|ACT_ENTHI Actin
Length = 376
Score = 327 bits (839), Expect = 2e-89
Identities = 156/287 (54%), Positives = 213/287 (74%), Gaps = 5/287 (1%)
Frame = +2
Query: 5 QPVVIDNGSGVIKAGFAGATTPKIHFPNYIGRPKHKRVMAGALEGDTFIGPKAEEHRGLM 184
Q +V+DNGSG+ KAGFAG P+ FP+ +GRP+H VMAG + D ++G +A+ RG++
Sbjct: 7 QALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVSVMAGMGQKDAYVGDEAQSKRGIL 66
Query: 185 NIRYPMEHGVVQDWNDMEKIWSYIYGPEQLKTSSEEHPVLLTEAPLNPLKNREKAAEIFF 364
++YP+EHG+V +W+DMEKIW + + E L+ + EEHPVLLTEAP+NP NREK +I F
Sbjct: 67 TLKYPIEHGIVNNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPMNPKANREKMTQIMF 125
Query: 365 ETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMRTDIAGRD 544
ETFN PA+Y+ +QAVLSLYA+GRTTG+V+DSGDGV+H VPIYEGF+L HAI+R D+AGRD
Sbjct: 126 ETFNTPAMYVGIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGFSLPHAILRLDLAGRD 185
Query: 545 VSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSA--NPEMQE---QSEIDNTTYPLP 709
++ YL +L + G F T+AE EIVR +KEK C+++ N EMQ+ SE++ +Y LP
Sbjct: 186 LTDYLMKILTERGYAFTTTAEREIVRDIKEKLCYVAEDFNEEMQKAASSSELEK-SYELP 244
Query: 710 DGSKLRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLR 850
DG + +G +FR PE LF+P +G EC+GIHE SI K D+D+R
Sbjct: 245 DGQVITVGNERFRCPEALFQPSFLGMECNGIHETTYNSIMKCDVDIR 291
>sp|P53500|ACT_CYAME Actin
Length = 377
Score = 327 bits (837), Expect = 3e-89
Identities = 157/286 (54%), Positives = 216/286 (75%), Gaps = 6/286 (2%)
Frame = +2
Query: 11 VVIDNGSGVIKAGFAGATTPKIHFPNYIGRPKHKRVMAGALEGDTFIGPKAEEHRGLMNI 190
+VIDNGSG++KAGFAG P+ FP+ +GRP+H+ VM G + D+++G +A+ RG++++
Sbjct: 9 LVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQAVMVGMGQKDSYVGDEAQSKRGILSL 68
Query: 191 RYPMEHGVVQDWNDMEKIWSYIYGPEQLKTSSEEHPVLLTEAPLNPLKNREKAAEIFFET 370
+YP+EHG+V +W+DMEKIW + + E L+ S E+HPVLLTEAPLNP NREK +I FET
Sbjct: 69 KYPIEHGIVTNWDDMEKIWYHTFYNE-LRISPEDHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 371 FNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMRTDIAGRDVS 550
FNVPA+Y+++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+AL HAIMR D+AGRD++
Sbjct: 128 FNVPAMYVAIQAVLSLYASGRTTGIVVDSGDGVTHTVPIYEGYALPHAIMRIDLAGRDLT 187
Query: 551 RYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQ------EQSEIDNTTYPLPD 712
YL +L + G F T+AE EIVR +KEK C+++ + + + + ++ID Y LPD
Sbjct: 188 DYLAKILTERGYSFTTTAEREIVRDIKEKCCYVAQDYDHELEIASSQPAKIDK-QYELPD 246
Query: 713 GSKLRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLR 850
G + IG +FR PE+LF+P LIG E +GIH V SI K D+D+R
Sbjct: 247 GQIITIGSERFRCPEVLFQPSLIGMEGEGIHNVAYQSIMKCDVDIR 292
>sp|P53496|ACT11_ARATH Actin-11
Length = 377
Score = 326 bits (836), Expect = 4e-89
Identities = 156/288 (54%), Positives = 212/288 (73%), Gaps = 6/288 (2%)
Frame = +2
Query: 5 QPVVIDNGSGVIKAGFAGATTPKIHFPNYIGRPKHKRVMAGALEGDTFIGPKAEEHRGLM 184
QP+V DNG+G++KAGFAG P+ FP+ +GRP+H VM G + D ++G +A+ RG++
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 185 NIRYPMEHGVVQDWNDMEKIWSYIYGPEQLKTSSEEHPVLLTEAPLNPLKNREKAAEIFF 364
++YP+EHG+V +W+DMEKIW + + E L+ + EEHPVLLTEAPLNP NREK +I F
Sbjct: 68 TLKYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 365 ETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMRTDIAGRD 544
ETFN PA+Y+++QAVLSLYA+GRTTG+VLDSGDGV+H VPIYEG+AL HAI+R D+AGRD
Sbjct: 127 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
Query: 545 VSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQSEIDNT------TYPL 706
++ YL +L + G F TSAE EIVR +KEK +++ + +++ E NT +Y L
Sbjct: 187 LTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIAL--DYEQEMETANTSSSVEKSYEL 244
Query: 707 PDGSKLRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLR 850
PDG + IGG +FR PE+LF+P L+G E GIHE SI K D+D+R
Sbjct: 245 PDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIR 292
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,367,172
Number of Sequences: 369166
Number of extensions: 2466209
Number of successful extensions: 7415
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6776
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8390082510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)