Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_005_L01
(896 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P12716|ACTC_PISOC Actin, cytoplasmic 576 e-164
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 575 e-164
sp|P10987|ACT1_DROME Actin-5C >gi|67462113|sp|P84183|ACT4_B... 573 e-163
sp|Q93131|ACTC_BRAFL Actin, cytoplasmic (BfCA1) 573 e-163
sp|P30163|ACT2_ONCVO Actin-2 573 e-163
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 573 e-163
sp|O17320|ACT_CRAGI Actin 573 e-163
sp|Q93129|ACTC_BRABE Actin, cytoplasmic (BbCA1) 573 e-163
sp|Q25010|ACT3A_HELAM Actin, cytoplasmic A3a 573 e-163
sp|P17126|ACT_HYDAT Actin, non-muscle 6.2 573 e-163
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 576 bits (1485), Expect = e-164
Identities = 282/288 (97%), Positives = 286/288 (99%)
Frame = +1
Query: 31 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 210
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 211 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 390
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 391 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLT 570
FN+PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHTVPIYEGYALPHAI R+DLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 571 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQ 750
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEMQTAASSSSLEKSYELPDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQ 247
Query: 751 VITIGNERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDVDIRKDLY 894
VITIGNERFRCPEALFQPSFLGME+AGIHETTYNSIMKCDVDIRKDLY
Sbjct: 248 VITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLY 295
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 575 bits (1481), Expect = e-164
Identities = 281/288 (97%), Positives = 285/288 (98%)
Frame = +1
Query: 31 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 210
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 211 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 390
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 391 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLT 570
FN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI R+DLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLT 187
Query: 571 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQ 750
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEMQTA SSSSLEKSYELPDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDGQ 247
Query: 751 VITIGNERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDVDIRKDLY 894
VITIGNERFRCPEALFQPSFLGME AGIHETTYNSIMKCDVDIRKDLY
Sbjct: 248 VITIGNERFRCPEALFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLY 295
>sp|P10987|ACT1_DROME Actin-5C
sp|P84183|ACT4_BOMMO Actin, cytoplasmic A4
sp|P84184|ACT3B_HELAM Actin, cytoplasmic A3b
sp|P84185|ACT1D_ANOGA Actin, cytoplasmic 1D
Length = 376
Score = 573 bits (1478), Expect = e-163
Identities = 281/288 (97%), Positives = 284/288 (98%)
Frame = +1
Query: 31 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 210
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 211 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 390
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 391 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLT 570
FN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI R+DLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 571 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQ 750
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSYELPDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 247
Query: 751 VITIGNERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDVDIRKDLY 894
VITIGNERFRCPEALFQPSFLGME GIHETTYNSIMKCDVDIRKDLY
Sbjct: 248 VITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLY 295
>sp|Q93131|ACTC_BRAFL Actin, cytoplasmic (BfCA1)
Length = 375
Score = 573 bits (1478), Expect = e-163
Identities = 279/288 (96%), Positives = 285/288 (98%)
Frame = +1
Query: 31 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 210
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 7 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 66
Query: 211 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 390
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 67 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126
Query: 391 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLT 570
FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI R+DLAGRDLT
Sbjct: 127 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 186
Query: 571 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQ 750
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSYELPDGQ
Sbjct: 187 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMSTAASSSSLEKSYELPDGQ 246
Query: 751 VITIGNERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDVDIRKDLY 894
VITIGNERFRCPE+LFQPSFLGME+ G+HETTYNSIMKCD+DIRKDLY
Sbjct: 247 VITIGNERFRCPESLFQPSFLGMESTGVHETTYNSIMKCDIDIRKDLY 294
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 573 bits (1478), Expect = e-163
Identities = 279/288 (96%), Positives = 286/288 (99%)
Frame = +1
Query: 31 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 210
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 211 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 390
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 391 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLT 570
FN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI R+DLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 571 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQ 750
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSYELPDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 247
Query: 751 VITIGNERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDVDIRKDLY 894
VIT+GNERFRCPEALFQPSFLGME+AGIHETTYNSIMKCD+DIRKDLY
Sbjct: 248 VITVGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDIDIRKDLY 295
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 573 bits (1477), Expect = e-163
Identities = 279/288 (96%), Positives = 286/288 (99%)
Frame = +1
Query: 31 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 210
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 211 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 390
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 391 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLT 570
FN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI R+DLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLT 187
Query: 571 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQ 750
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEMQTA++SSSLEKSYELPDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQ 247
Query: 751 VITIGNERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDVDIRKDLY 894
VITIGNERFRCPEA+FQPSFLGME AGIHETTYNSIMKCDVDIRKDLY
Sbjct: 248 VITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLY 295
>sp|O17320|ACT_CRAGI Actin
Length = 376
Score = 573 bits (1477), Expect = e-163
Identities = 280/288 (97%), Positives = 286/288 (99%)
Frame = +1
Query: 31 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 210
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 211 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 390
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 391 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLT 570
FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI R+DLAGRDLT
Sbjct: 128 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIMRLDLAGRDLT 187
Query: 571 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQ 750
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSYELPDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQ 247
Query: 751 VITIGNERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDVDIRKDLY 894
VITIGNERFRCPEA+FQPSFLGME++GIHET+YNSIMKCDVDIRKDLY
Sbjct: 248 VITIGNERFRCPEAMFQPSFLGMESSGIHETSYNSIMKCDVDIRKDLY 295
>sp|Q93129|ACTC_BRABE Actin, cytoplasmic (BbCA1)
Length = 375
Score = 573 bits (1477), Expect = e-163
Identities = 279/288 (96%), Positives = 285/288 (98%)
Frame = +1
Query: 31 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 210
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 7 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 66
Query: 211 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 390
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 67 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126
Query: 391 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLT 570
FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI R+DLAGRDLT
Sbjct: 127 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 186
Query: 571 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQ 750
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSYELPDGQ
Sbjct: 187 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246
Query: 751 VITIGNERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDVDIRKDLY 894
VITIGNERFRCPE+LFQPSFLGME+ G+HETTYNSIMKCD+DIRKDLY
Sbjct: 247 VITIGNERFRCPESLFQPSFLGMESTGVHETTYNSIMKCDIDIRKDLY 294
>sp|Q25010|ACT3A_HELAM Actin, cytoplasmic A3a
Length = 376
Score = 573 bits (1476), Expect = e-163
Identities = 281/288 (97%), Positives = 284/288 (98%)
Frame = +1
Query: 31 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 210
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 211 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 390
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 391 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLT 570
FN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI R+DLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 571 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQ 750
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSYELPDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 247
Query: 751 VITIGNERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDVDIRKDLY 894
VITIGNERFRCPEALFQPSFLGME GIHETTYNSIMKCDVDIRKDLY
Sbjct: 248 VITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLY 295
>sp|P17126|ACT_HYDAT Actin, non-muscle 6.2
Length = 376
Score = 573 bits (1476), Expect = e-163
Identities = 281/288 (97%), Positives = 285/288 (98%)
Frame = +1
Query: 31 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 210
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 211 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 390
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 391 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLT 570
FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI R+DLAGRDLT
Sbjct: 128 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLT 187
Query: 571 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQ 750
DYLMKILTERGYSFTTTAEREIVRDIKEKL Y+ALDFEQEMQTAASSSSLEKSYELPDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLSYVALDFEQEMQTAASSSSLEKSYELPDGQ 247
Query: 751 VITIGNERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDVDIRKDLY 894
VITIGNERFRCPE LFQPSF+GME+AGIHETTYNSIMKCDVDIRKDLY
Sbjct: 248 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDVDIRKDLY 295
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,250,931
Number of Sequences: 369166
Number of extensions: 2293651
Number of successful extensions: 7044
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6872
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9030416440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)