Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_005_I12
(946 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor 245 1e-64
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 241 3e-63
sp|Q9R014|CATJ_MOUSE Cathepsin J precursor (Cathepsin P) (C... 233 5e-61
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 230 5e-60
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 228 2e-59
sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted ... 228 2e-59
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 226 7e-59
sp|O35186|CATK_RAT Cathepsin K precursor 226 7e-59
sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine protei... 225 2e-58
sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathe... 224 2e-58
>sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor
Length = 326
Score = 245 bits (626), Expect = 1e-64
Identities = 121/312 (38%), Positives = 182/312 (58%), Gaps = 6/312 (1%)
Frame = +3
Query: 3 YSDETDLIRRNIWEENLKFIKQHNLQFDLGKTKFSVGLNEFSDMNQKEFQSNILSVXXXX 182
Y+ D RRNIWE+N+K I++HNL+ DLG +++GLN+F+DM +EF++ L+
Sbjct: 32 YNGADDQHRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLT----- 86
Query: 183 XXXXXXXXXXXXXXLSRNDFITT------PNNIKLPDSWDWREKGAVSPVGNQRNNSCGY 344
+SR I + NN +PD DWRE G V+ V +Q N +
Sbjct: 87 -------------EMSRASDILSHGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCW 133
Query: 345 AFAAAGALEGQNFNLTKTLEILSKQQIIDCSIYYGNSGCYGGILSKAYAYLADYGSELDE 524
AF+ G +EGQ +T S+QQ++DCS +GN+GC GG++ AY YL +G E +
Sbjct: 134 AFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQFGLETES 193
Query: 525 DYPFVGCNSNCKYDKSLATVKPYEFKYVSRGKEADLMNAVYNIGPISAAIDASPTSFKQY 704
YP+ C+Y+K L K + V G E +L N V P + A+D + F Y
Sbjct: 194 SYPYTAVEGQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDVE-SDFMMY 252
Query: 705 KTGIYDDTSCSSNNVNHAVLVIGYGEESGQSFWIIKNSWGSKWGMKGYMKLSRDTNNLCG 884
++GIY +CS VNHAVL +GYG + G +WI+KNSWG+ WG +GY++++R+ N+CG
Sbjct: 253 RSGIYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWGERGYIRMARNRGNMCG 312
Query: 885 IASMASVPLLKK 920
IAS+AS+P++ +
Sbjct: 313 IASLASLPMVAR 324
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 241 bits (614), Expect = 3e-63
Identities = 123/299 (41%), Positives = 175/299 (58%), Gaps = 5/299 (1%)
Frame = +3
Query: 27 RRNIWEENLKFIKQHNLQFDLGKTKFSVGLNEFSDMNQKEFQSNILSVXXXXXXXXXXXX 206
RR +WE+N+K I+ HN ++ GK F++ +N F DM +EF+ +
Sbjct: 48 RRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMM--------------G 93
Query: 207 XXXXXXLSRNDFITTPNNIKLPDSWDWREKGAVSPVGNQRNNSCGYAFAAAGALEGQNFN 386
+ P + LP S DWR+KG V+PV NQ+ +AF+A GALEGQ F
Sbjct: 94 CFRNQKFRKGKVFREPLFLDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFR 153
Query: 387 LTKTLEILSKQQIIDCSIYYGNSGCYGGILSKAYAYLADYGS-ELDEDYPFVGCNSNCKY 563
T L LS+Q ++DCS GN GC GG +++A+ Y+ + G + +E YP+V + CKY
Sbjct: 154 KTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKY 213
Query: 564 DKSLATVKPYEFKYVSRGKEADLMNAVYNIGPISAAIDASPTSFKQYKTGIYDDTSCSSN 743
+ F V+ GKE LM AV +GPIS A+DA +SF+ YK+GIY + CSS
Sbjct: 214 RPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSK 273
Query: 744 NVNHAVLVIGYGEESGQS----FWIIKNSWGSKWGMKGYMKLSRDTNNLCGIASMASVP 908
N++H VLV+GYG E S +W++KNSWG +WG GY+K+++D NN CGIA+ AS P
Sbjct: 274 NLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYP 332
>sp|Q9R014|CATJ_MOUSE Cathepsin J precursor (Cathepsin P) (Catlrp-p)
Length = 333
Score = 233 bits (595), Expect = 5e-61
Identities = 133/312 (42%), Positives = 183/312 (58%), Gaps = 10/312 (3%)
Frame = +3
Query: 3 YSDETDLIRRNIWEENLKFIKQHNLQFDLGKTKFSVGLNEFSDMNQKEFQSNILSVXXXX 182
YS E + +RR +WEEN++ IK HN + LGK F++ +N+F D +EF+ +I ++
Sbjct: 40 YSPE-EALRRAVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQTSEEFRKSIDNIPIPA 98
Query: 183 XXXXXXXXXXXXXXLSRNDFITTPN-----NIKLPDSWDWREKGAVSPVGNQRNNSCGYA 347
+T P+ +I LPD DWRE+G V+PV NQ +A
Sbjct: 99 A-------------------MTDPHAQNHVSIGLPDYKDWREEGYVTPVRNQGKCGSCWA 139
Query: 348 FAAAGALEGQNFNLTKTLEILSKQQIIDCSIYYGNSGCYGGILSKAYAY-LADYGSELDE 524
FAAAGA+EGQ F T L LS Q ++DCS GN GC G +A+ Y L + G E +
Sbjct: 140 FAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVGNKGCQSGTAHQAFEYVLKNKGLEAEA 199
Query: 525 DYPFVGCNSNCKYDKSLATVKPYEFKYVSRGKEADLMNAVYNIGPISAAIDASPTSFKQY 704
YP+ G + C+Y A+ ++ + E L AV +IGP+SAAIDAS SF+ Y
Sbjct: 200 TYPYEGKDGPCRYRSENASANITDYVNLP-PNELYLWVAVASIGPVSAAIDASHDSFRFY 258
Query: 705 KTGIYDDTSCSSNNVNHAVLVIGYGEE----SGQSFWIIKNSWGSKWGMKGYMKLSRDTN 872
GIY + +CSS VNHAVLV+GYG E G ++W+IKNSWG +WGM GYM++++D N
Sbjct: 259 NGGIYYEPNCSSYFVNHAVLVVGYGSEGDVKDGNNYWLIKNSWGEEWGMNGYMQIAKDHN 318
Query: 873 NLCGIASMASVP 908
N CGIAS+AS P
Sbjct: 319 NHCGIASLASYP 330
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 230 bits (586), Expect = 5e-60
Identities = 123/299 (41%), Positives = 172/299 (57%), Gaps = 5/299 (1%)
Frame = +3
Query: 27 RRNIWEENLKFIKQHNLQFDLGKTKFSVGLNEFSDMNQKEFQSNILSVXXXXXXXXXXXX 206
RR +WE+N+K I+ HN ++ GK F++ +N F DM +EF+ +
Sbjct: 48 RRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKH------- 100
Query: 207 XXXXXXLSRNDFITTPNNIKLPDSWDWREKGAVSPVGNQRNNSCGYAFAAAGALEGQNFN 386
+ P ++P S DWREKG V+PV NQ +AF+A GALEGQ F
Sbjct: 101 -------KKGKMFQEPLFAEIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFR 153
Query: 387 LTKTLEILSKQQIIDCSIYYGNSGCYGGILSKAYAYLADYGS-ELDEDYPFVGCNS-NCK 560
T L LS+Q ++DCS GN GC GG++ A+ Y+ D G + +E YP++G ++ C
Sbjct: 154 KTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCN 213
Query: 561 YDKSLATVKPYEFKYVSRGKEADLMNAVYNIGPISAAIDASPTSFKQYKTGIYDDTSCSS 740
Y + F + + +E LM AV +GPIS AIDA SF+ YK+GIY D CSS
Sbjct: 214 YKPECSAANDTGFVDLPQ-REKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSS 272
Query: 741 NNVNHAVLVIGYGEE---SGQSFWIIKNSWGSKWGMKGYMKLSRDTNNLCGIASMASVP 908
+++H VLV+GYG E S FWI+KNSWG +WG GY+K+++D NN CGIA+ AS P
Sbjct: 273 KDLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYP 331
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 228 bits (580), Expect = 2e-59
Identities = 122/299 (40%), Positives = 171/299 (57%), Gaps = 5/299 (1%)
Frame = +3
Query: 27 RRNIWEENLKFIKQHNLQFDLGKTKFSVGLNEFSDMNQKEFQSNILSVXXXXXXXXXXXX 206
RR +WE+N+K I+ HN ++ GK F++ +N F DM +EF+ +
Sbjct: 48 RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR------ 101
Query: 207 XXXXXXLSRNDFITTPNNIKLPDSWDWREKGAVSPVGNQRNNSCGYAFAAAGALEGQNFN 386
+ P + P S DWREKG V+PV NQ +AF+A GALEGQ F
Sbjct: 102 --------KGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFR 153
Query: 387 LTKTLEILSKQQIIDCSIYYGNSGCYGGILSKAYAYLADYGS-ELDEDYPFVGCNSNCKY 563
T L LS+Q ++DCS GN GC GG++ A+ Y+ D G + +E YP+ +CKY
Sbjct: 154 KTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY 213
Query: 564 DKSLATVKPYEFKYVSRGKEADLMNAVYNIGPISAAIDASPTSFKQYKTGIYDDTSCSSN 743
+ + F + + ++A LM AV +GPIS AIDA SF YK GIY + CSS
Sbjct: 214 NPKYSVANDTGFVDIPKQEKA-LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSE 272
Query: 744 NVNHAVLVIGYGEESGQS----FWIIKNSWGSKWGMKGYMKLSRDTNNLCGIASMASVP 908
+++H VLV+GYG ES +S +W++KNSWG +WGM GY+K+++D N CGIAS AS P
Sbjct: 273 DMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYP 331
>sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted protein) (MEP) (p39 cysteine
proteinase) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 228 bits (580), Expect = 2e-59
Identities = 119/309 (38%), Positives = 180/309 (58%), Gaps = 5/309 (1%)
Frame = +3
Query: 3 YSDETDLIRRNIWEENLKFIKQHNLQFDLGKTKFSVGLNEFSDMNQKEFQSNILSVXXXX 182
Y + RR IWE+N++ I+ HN ++ G+ FS+ +N F DM +EF+ +
Sbjct: 40 YGTNEEEWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQK 99
Query: 183 XXXXXXXXXXXXXXLSRNDFITTPNNIKLPDSWDWREKGAVSPVGNQRNNSCGYAFAAAG 362
+ P +K+P S DWREKG V+PV NQ +AF+A+G
Sbjct: 100 H--------------KKGRLFQEPLMLKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASG 145
Query: 363 ALEGQNFNLTKTLEILSKQQIIDCSIYYGNSGCYGGILSKAYAYLADYGS-ELDEDYPFV 539
LEGQ F T L LS+Q ++DCS GN GC GG++ A+ Y+ + G + +E YP+
Sbjct: 146 CLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYE 205
Query: 540 GCNSNCKYDKSLATVKPYEFKYVSRGKEADLMNAVYNIGPISAAIDASPTSFKQYKTGIY 719
+ +CKY A F + + ++A LM AV +GPIS A+DAS S + Y +GIY
Sbjct: 206 AKDGSCKYRAEFAVANDTGFVDIPQQEKA-LMKAVATVGPISVAMDASHPSLQFYSSGIY 264
Query: 720 DDTSCSSNNVNHAVLVIGYGEESGQS----FWIIKNSWGSKWGMKGYMKLSRDTNNLCGI 887
+ +CSS N++H VL++GYG E S +W++KNSWGS+WGM+GY+K+++D +N CG+
Sbjct: 265 YEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGL 324
Query: 888 ASMASVPLL 914
A+ AS P++
Sbjct: 325 ATAASYPVV 333
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 226 bits (576), Expect = 7e-59
Identities = 122/300 (40%), Positives = 172/300 (57%), Gaps = 6/300 (2%)
Frame = +3
Query: 27 RRNIWEENLKFIKQHNLQFDLGKTKFSVGLNEFSDMNQKEFQSNILSVXXXXXXXXXXXX 206
RR +WE+N+K I+ HN ++ GK FS+ +N F DM +EF+ +
Sbjct: 48 RRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKH------- 100
Query: 207 XXXXXXLSRNDFITTPNNIKLPDSWDWREKGAVSPVGNQRNNSCGYAFAAAGALEGQNFN 386
+ +++P S DWREKG V+ V NQ +AF+A GALEGQ F
Sbjct: 101 -------KKGKVFHESLVLEVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFR 153
Query: 387 LTKTLEILSKQQIIDCSIYYGNSGCYGGILSKAYAYLADYGS-ELDEDYPFVGCNSN-CK 560
T L LS+Q ++DCS GN GC GG++ A+ Y+ D G + +E YP++G +N C
Sbjct: 154 KTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCT 213
Query: 561 YDKSLATVKPYEFKYVSRGKEADLMNAVYNIGPISAAIDASPTSFKQYKTGIYDDTSCSS 740
Y + F + + +E LM AV +GPIS AIDA +SF+ YK+GIY D CSS
Sbjct: 214 YKPECSAANDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSS 272
Query: 741 NNVNHAVLVIGYGEESGQS----FWIIKNSWGSKWGMKGYMKLSRDTNNLCGIASMASVP 908
+++H VLV+GYG E S FWI+KNSWG +WG GY+K+++D NN CGI++ AS P
Sbjct: 273 KDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGISTAASYP 332
>sp|O35186|CATK_RAT Cathepsin K precursor
Length = 329
Score = 226 bits (576), Expect = 7e-59
Identities = 125/305 (40%), Positives = 173/305 (56%), Gaps = 3/305 (0%)
Frame = +3
Query: 3 YSDETDLI-RRNIWEENLKFIKQHNLQFDLGKTKFSVGLNEFSDMNQKEFQSNILSVXXX 179
Y+ + D I RR IWE+NLK I HNL+ LG + + +N DM +E + +
Sbjct: 37 YNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQKMTGLRVP 96
Query: 180 XXXXXXXXXXXXXXXLSRNDFITTPN-NIKLPDSWDWREKGAVSPVGNQRNNSCGYAFAA 356
ND + TP ++PDS D+R+KG V+PV NQ +AF++
Sbjct: 97 PSRSFS------------NDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSS 144
Query: 357 AGALEGQNFNLTKTLEILSKQQIIDCSIYYGNSGCYGGILSKAYAYLADYGSELDED-YP 533
AGALEGQ T L LS Q ++DC N GC GG ++ A+ Y+ G ED YP
Sbjct: 145 AGALEGQLKKKTGKLLALSPQNLVDC--VSENYGCGGGYMTTAFQYVQQNGGIDSEDAYP 202
Query: 534 FVGCNSNCKYDKSLATVKPYEFKYVSRGKEADLMNAVYNIGPISAAIDASPTSFKQYKTG 713
+VG + +C Y+ + K ++ + G E L AV +GP+S +IDAS TSF+ Y G
Sbjct: 203 YVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRG 262
Query: 714 IYDDTSCSSNNVNHAVLVIGYGEESGQSFWIIKNSWGSKWGMKGYMKLSRDTNNLCGIAS 893
+Y D +C +NVNHAVLV+GYG + G +WIIKNSWG WG KGY+ L+R+ NN CGI +
Sbjct: 263 VYYDENCDRDNVNHAVLVVGYGTQKGNKYWIIKNSWGESWGNKGYVLLARNKNNACGITN 322
Query: 894 MASVP 908
+AS P
Sbjct: 323 LASFP 327
>sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine proteinase 1) [Contains: Cathepsin
L heavy chain; Cathepsin L light chain]
Length = 341
Score = 225 bits (573), Expect = 2e-58
Identities = 115/307 (37%), Positives = 180/307 (58%), Gaps = 3/307 (0%)
Frame = +3
Query: 3 YSDETD-LIRRNIWEENLKFIKQHNLQFDLGKTKFSVGLNEFSDMNQKEFQSNILSVXXX 179
Y DET+ R I+ EN I +HN +F GK F + +N+++D+ EF+ +
Sbjct: 40 YQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQ----LMNG 95
Query: 180 XXXXXXXXXXXXXXXLSRNDFITTPNNIKLPDSWDWREKGAVSPVGNQRNNSCGYAFAAA 359
FI+ P ++ LP S DWR KGAV+ V +Q + +AF++
Sbjct: 96 FNYTLHKQLRAADESFKGVTFIS-PAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSST 154
Query: 360 GALEGQNFNLTKTLEILSKQQIIDCSIYYGNSGCYGGILSKAYAYLADYGS-ELDEDYPF 536
GALEGQ+F + L LS+Q ++DCS YGN+GC GG++ A+ Y+ D G + ++ YP+
Sbjct: 155 GALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPY 214
Query: 537 VGCNSNCKYDKSLATVKPYEFKYVSRGKEADLMNAVYNIGPISAAIDASPTSFKQYKTGI 716
+ +C ++K F + +G E + AV +GP+S AIDAS SF+ Y G+
Sbjct: 215 EAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGV 274
Query: 717 YDDTSCSSNNVNHAVLVIGYG-EESGQSFWIIKNSWGSKWGMKGYMKLSRDTNNLCGIAS 893
Y++ C + N++H VLV+G+G +ESG+ +W++KNSWG+ WG KG++K+ R+ N CGIAS
Sbjct: 275 YNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNKENQCGIAS 334
Query: 894 MASVPLL 914
+S PL+
Sbjct: 335 ASSYPLV 341
>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 339
Score = 224 bits (572), Expect = 2e-58
Identities = 115/305 (37%), Positives = 178/305 (58%), Gaps = 3/305 (0%)
Frame = +3
Query: 3 YSDETD-LIRRNIWEENLKFIKQHNLQFDLGKTKFSVGLNEFSDMNQKEFQSNILSVXXX 179
Y++E + R I+ EN I +HN F GK + +GLN+++DM EF+ +
Sbjct: 39 YANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETM-----N 93
Query: 180 XXXXXXXXXXXXXXXLSRNDFITTPNNIKLPDSWDWREKGAVSPVGNQRNNSCGYAFAAA 359
L +I P ++ +P S DWRE GAV+ V +Q + +AF++
Sbjct: 94 GYNHTLRQLMRERTGLVGATYI-PPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSST 152
Query: 360 GALEGQNFNLTKTLEILSKQQIIDCSIYYGNSGCYGGILSKAYAYLADYGS-ELDEDYPF 536
GALEGQ+F L LS+Q ++DCS YGN+GC GG++ A+ Y+ D G + ++ YP+
Sbjct: 153 GALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPY 212
Query: 537 VGCNSNCKYDKSLATVKPYEFKYVSRGKEADLMNAVYNIGPISAAIDASPTSFKQYKTGI 716
G + +C ++K+ F + G E + AV +GP+S AIDAS SF+ Y G+
Sbjct: 213 EGIDDSCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGV 272
Query: 717 YDDTSCSSNNVNHAVLVIGYG-EESGQSFWIIKNSWGSKWGMKGYMKLSRDTNNLCGIAS 893
Y++ C N++H VLV+GYG +ESG +W++KNSWG+ WG +GY+K++R+ NN CGIA+
Sbjct: 273 YNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIKMARNQNNQCGIAT 332
Query: 894 MASVP 908
+S P
Sbjct: 333 ASSYP 337
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,861,045
Number of Sequences: 369166
Number of extensions: 1738462
Number of successful extensions: 5578
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5092
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9798962520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)