Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_005_I06
(949 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P80314|TCPB_MOUSE T-complex protein 1, beta subunit (TCP... 460 e-129
sp|P78371|TCPB_HUMAN T-complex protein 1, beta subunit (TCP... 459 e-129
sp|P47207|TCPB_CAEEL T-complex protein 1, beta subunit (TCP... 438 e-122
sp|P39076|TCPB_YEAST T-complex protein 1, beta subunit (TCP... 412 e-115
sp|Q10147|TCPB_SCHPO Probable T-complex protein 1, beta sub... 404 e-112
sp|Q9YA66|THSB_AERPE Thermosome beta subunit (Thermosome su... 207 3e-53
sp|Q9YDK6|THSA_AERPE Thermosome alpha subunit (Thermosome s... 206 8e-53
sp|Q9V2T3|THSB_DESMO Thermosome beta subunit (Thermosome su... 201 2e-51
sp|O26885|THSB_METTH Thermosome beta subunit (Thermosome su... 194 2e-49
sp|Q9V2T5|THSA_SULAC Thermosome alpha subunit (Thermosome s... 193 5e-49
>sp|P80314|TCPB_MOUSE T-complex protein 1, beta subunit (TCP-1-beta) (CCT-beta)
Length = 535
Score = 460 bits (1183), Expect = e-129
Identities = 235/317 (74%), Positives = 272/317 (85%), Gaps = 1/317 (0%)
Frame = +1
Query: 1 ILSRGADEERAETARMSSFVGAIAIGDLVKTTLGPKGMDKILLSGSSDS-ITVTNDGATI 177
I GADEERAETAR+SSF+GAIAIGDLVK+TLGPKGMDKILLS D+ + VTNDGATI
Sbjct: 11 IFKAGADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDAALMVTNDGATI 70
Query: 178 LKSIGVDNPAAKILVEMSKVQDDEVGDGTTSVVVLASELLREAEQLISQKLHPQTIISGW 357
LK+IGVDNPAAK+LV+MS+VQDDEVGDGTTSV VLA+ELLREAE LI++K+HPQTIISGW
Sbjct: 71 LKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIISGW 130
Query: 358 RKACAEASLALKQSARSSTEFPSTFEDELLNIARTTLSSKILTQHKDKFAKLAVDAVTRL 537
R+A A AL SA + F +L+NIA TTLSSK+LT HKD F KLAV+AV RL
Sbjct: 131 REATKAAREALLSSAVDHGSDEARFWQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRL 190
Query: 538 KGSGNLEAIQIIKKLGGLLSDSYLDEGFLLEKKVGVNQPKRIENAKILIANTPMDADKIK 717
KGSGNLEAI +IKKLGG L+DSYLDEGFLL+KK+GVNQPKRIENAKILIANT MD DKIK
Sbjct: 191 KGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIK 250
Query: 718 VFGSKIKVDAVSKIADLEEAEKQKMREKVEKIAKHGCNVFINRQLIYNYPEQLFSMKGIM 897
+FGS+++VD+ +K+A++E AEK+KM+EKVE+I KHG N FINRQLIYNYPEQLF G+M
Sbjct: 251 IFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVM 310
Query: 898 AIEHADFEGVERLSLVT 948
AIEHADF GVERL+LVT
Sbjct: 311 AIEHADFAGVERLALVT 327
>sp|P78371|TCPB_HUMAN T-complex protein 1, beta subunit (TCP-1-beta) (CCT-beta)
Length = 535
Score = 459 bits (1181), Expect = e-129
Identities = 235/317 (74%), Positives = 271/317 (85%), Gaps = 1/317 (0%)
Frame = +1
Query: 1 ILSRGADEERAETARMSSFVGAIAIGDLVKTTLGPKGMDKILLSGSSD-SITVTNDGATI 177
I GADEERAETAR++SF+GAIAIGDLVK+TLGPKGMDKILLS D S+ VTNDGATI
Sbjct: 11 IFKAGADEERAETARLTSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATI 70
Query: 178 LKSIGVDNPAAKILVEMSKVQDDEVGDGTTSVVVLASELLREAEQLISQKLHPQTIISGW 357
LK+IGVDNPAAK+LV+MS+VQDDEVGDGTTSV VLA+ELLREAE LI++K+HPQTII+GW
Sbjct: 71 LKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGW 130
Query: 358 RKACAEASLALKQSARSSTEFPSTFEDELLNIARTTLSSKILTQHKDKFAKLAVDAVTRL 537
R+A A AL SA F +L+NIA TTLSSK+LT HKD F KLAV+AV RL
Sbjct: 131 REATKAAREALLSSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRL 190
Query: 538 KGSGNLEAIQIIKKLGGLLSDSYLDEGFLLEKKVGVNQPKRIENAKILIANTPMDADKIK 717
KGSGNLEAI IIKKLGG L+DSYLDEGFLL+KK+GVNQPKRIENAKILIANT MD DKIK
Sbjct: 191 KGSGNLEAIHIIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIK 250
Query: 718 VFGSKIKVDAVSKIADLEEAEKQKMREKVEKIAKHGCNVFINRQLIYNYPEQLFSMKGIM 897
+FGS+++VD+ +K+A++E AEK+KM+EKVE+I KHG N FINRQLIYNYPEQLF G+M
Sbjct: 251 IFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVM 310
Query: 898 AIEHADFEGVERLSLVT 948
AIEHADF GVERL+LVT
Sbjct: 311 AIEHADFAGVERLALVT 327
>sp|P47207|TCPB_CAEEL T-complex protein 1, beta subunit (TCP-1-beta) (CCT-beta)
Length = 529
Score = 438 bits (1126), Expect = e-122
Identities = 227/318 (71%), Positives = 270/318 (84%), Gaps = 3/318 (0%)
Frame = +1
Query: 1 ILSRGADEERAETARMSSFVGAIAIGDLVKTTLGPKGMDKILLSGSSDS---ITVTNDGA 171
IL A EER E+AR+SSFVGAIAIGDLVK+TLGPKGMDKIL+SG+ +S I VTNDGA
Sbjct: 6 ILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGA 65
Query: 172 TILKSIGVDNPAAKILVEMSKVQDDEVGDGTTSVVVLASELLREAEQLISQKLHPQTIIS 351
TILKSIGVDNPAAK+LV+MS QD EVGDGTTSV VLA+ELL+EAE+L++Q++HPQTIIS
Sbjct: 66 TILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIIS 125
Query: 352 GWRKACAEASLALKQSARSSTEFPSTFEDELLNIARTTLSSKILTQHKDKFAKLAVDAVT 531
G+R+A A +LK +SS E D+LL IARTTL SKIL+QHK+ FA+LAVDAV
Sbjct: 126 GYRRALGIAQESLK---KSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVL 182
Query: 532 RLKGSGNLEAIQIIKKLGGLLSDSYLDEGFLLEKKVGVNQPKRIENAKILIANTPMDADK 711
RLKGSGNL+AIQIIKKLGG +++SYLDEGFLLEK G+ QP+R+E AKILIANTPMD DK
Sbjct: 183 RLKGSGNLDAIQIIKKLGGSMNESYLDEGFLLEKLPGMFQPRRVEKAKILIANTPMDTDK 242
Query: 712 IKVFGSKIKVDAVSKIADLEEAEKQKMREKVEKIAKHGCNVFINRQLIYNYPEQLFSMKG 891
+KVFGS+++VD V+K+A+LE AEK KM+EKV+KI H CNVFINRQLIYNYPEQLF+
Sbjct: 243 VKVFGSRVRVDGVAKVAELEAAEKLKMKEKVDKILAHNCNVFINRQLIYNYPEQLFADAK 302
Query: 892 IMAIEHADFEGVERLSLV 945
+MAIEHADFEG+ERL+LV
Sbjct: 303 VMAIEHADFEGIERLALV 320
>sp|P39076|TCPB_YEAST T-complex protein 1, beta subunit (TCP-1-beta) (CCT-beta)
Length = 527
Score = 412 bits (1058), Expect = e-115
Identities = 214/310 (69%), Positives = 262/310 (84%), Gaps = 1/310 (0%)
Frame = +1
Query: 22 EERAETARMSSFVGAIAIGDLVKTTLGPKGMDKILLSGSSDSITVTNDGATILKSIGVDN 201
EERAE AR+S+FVGAIA+GDLVK+TLGPKGMDK+L S SS++ VTNDGATILKSI +DN
Sbjct: 12 EERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDN 71
Query: 202 PAAKILVEMSKVQDDEVGDGTTSVVVLASELLREAEQLISQ-KLHPQTIISGWRKACAEA 378
PAAK+LV +SKVQDDEVGDGTTSV VL++ELLREAE+LI Q K+HPQTII G+R A A A
Sbjct: 72 PAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAA 131
Query: 379 SLALKQSARSSTEFPSTFEDELLNIARTTLSSKILTQHKDKFAKLAVDAVTRLKGSGNLE 558
AL ++A ++ + F ++L++IA+TTLSSKIL+Q KD FA+LA +A+ RLKGS NLE
Sbjct: 132 LDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLE 191
Query: 559 AIQIIKKLGGLLSDSYLDEGFLLEKKVGVNQPKRIENAKILIANTPMDADKIKVFGSKIK 738
IQIIK LGG LSDS+LDEGF+L KK G NQPKRIENAKILIANT +D DK+K+FG+K K
Sbjct: 192 HIQIIKILGGKLSDSFLDEGFILAKKFGNNQPKRIENAKILIANTTLDTDKVKIFGTKFK 251
Query: 739 VDAVSKIADLEEAEKQKMREKVEKIAKHGCNVFINRQLIYNYPEQLFSMKGIMAIEHADF 918
VD+ +K+A LE+AE++KM+ K+ KI+K G N FINRQLIY+YPEQLF+ GI +IEHADF
Sbjct: 252 VDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADF 311
Query: 919 EGVERLSLVT 948
EGVERL+LVT
Sbjct: 312 EGVERLALVT 321
>sp|Q10147|TCPB_SCHPO Probable T-complex protein 1, beta subunit (TCP-1-beta) (CCT-beta)
Length = 527
Score = 404 bits (1039), Expect = e-112
Identities = 209/316 (66%), Positives = 254/316 (80%)
Frame = +1
Query: 1 ILSRGADEERAETARMSSFVGAIAIGDLVKTTLGPKGMDKILLSGSSDSITVTNDGATIL 180
I + +ER E AR+SSFVGAIA+GDLVK+TLGPKGMDKIL S SS I VTNDGATIL
Sbjct: 8 IFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATIL 67
Query: 181 KSIGVDNPAAKILVEMSKVQDDEVGDGTTSVVVLASELLREAEQLISQKLHPQTIISGWR 360
KSI +DN AAK+LV +SKVQDDEVGDGTTSV V A+ELLR+AE +++ K+HPQ II G+R
Sbjct: 68 KSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYR 127
Query: 361 KACAEASLALKQSARSSTEFPSTFEDELLNIARTTLSSKILTQHKDKFAKLAVDAVTRLK 540
A A AL+ S+ ++ P+ F +L NIARTTLSSKIL+Q+K+ FA+LAVDAV RLK
Sbjct: 128 IATKTAIDALRASSIDNSSDPAKFRSDLENIARTTLSSKILSQNKNHFAQLAVDAVLRLK 187
Query: 541 GSGNLEAIQIIKKLGGLLSDSYLDEGFLLEKKVGVNQPKRIENAKILIANTPMDADKIKV 720
GS NL+ IQIIK LGG L DS+LDEGF+L K +GVN PK +ENA ILIANT MD DK+KV
Sbjct: 188 GSTNLDNIQIIKILGGKLDDSFLDEGFILNKTIGVNCPKVMENANILIANTAMDTDKVKV 247
Query: 721 FGSKIKVDAVSKIADLEEAEKQKMREKVEKIAKHGCNVFINRQLIYNYPEQLFSMKGIMA 900
FG++++VD K+A+LE AE++KM+ KVEKI H N FINRQLIYN+PEQLF+ GIM+
Sbjct: 248 FGARVRVDTTGKLAELERAEREKMKAKVEKIKSHNINCFINRQLIYNWPEQLFADAGIMS 307
Query: 901 IEHADFEGVERLSLVT 948
IEHADF+G+ERLSLVT
Sbjct: 308 IEHADFDGIERLSLVT 323
>sp|Q9YA66|THSB_AERPE Thermosome beta subunit (Thermosome subunit 2) (Chaperonin beta
subunit)
Length = 548
Score = 207 bits (527), Expect = 3e-53
Identities = 122/325 (37%), Positives = 202/325 (62%), Gaps = 9/325 (2%)
Frame = +1
Query: 1 ILSRGADEERAETARMSSFVGAIAIGDLVKTTLGPKGMDKILLSGSSDSITVTNDGATIL 180
IL G A ++ + AI ++KTT GPKGMDK+L+ D IT+TN+GATIL
Sbjct: 18 ILKEGTQRSYGREALRANIMAVRAIAQILKTTYGPKGMDKMLVDSLGD-ITITNNGATIL 76
Query: 181 KSIGVDNPAAKILVEMSKVQDDEVGDGTTSVVVLASELLREAEQLISQKLHPQTIISGWR 360
+ V +PAAK+LV++SK Q+DE GDGT + V+ A ELL+EAE+L+ +HP I+ G++
Sbjct: 77 DKMDVAHPAAKMLVQISKGQEDEAGDGTKTTVIFAGELLKEAEKLLDINIHPTIIVEGYK 136
Query: 361 KACAEASLALKQSARSSTEFPSTFED--ELLNIARTTLSSKILTQHKDKFAKLAVDAVTR 534
+A +AS ++ A P +++D +L IA+T+L+SK + + +D FA+LAV+AV
Sbjct: 137 EALRKASEVIESIAE-----PVSYDDVEKLKLIAKTSLNSKAVAEARDYFAELAVEAVRT 191
Query: 535 L------KGSGNLEAIQIIKKLGGLLSDSYLDEGFLLEKK-VGVNQPKRIENAKILIANT 693
+ + +L IQI+KK GG L D+ L G +L+K+ V + P+R+ENA+I + +T
Sbjct: 192 VAERRGDRWYVDLNNIQIVKKHGGSLRDTRLVRGIVLDKEVVHPDMPRRVENARIALLDT 251
Query: 694 PMDADKIKVFGSKIKVDAVSKIADLEEAEKQKMREKVEKIAKHGCNVFINRQLIYNYPEQ 873
P++ +K ++ +I + + +I L E +++ ++EK+EKIA G NV I ++ I + +
Sbjct: 252 PLEIEKPEI-DLEISITSPEQIKALYEKQERILQEKIEKIAATGANVVITQKGIDDVAQH 310
Query: 874 LFSMKGIMAIEHADFEGVERLSLVT 948
+ KGI+A+ +E+++ T
Sbjct: 311 FLAKKGILAVRRVKRSDIEKIARAT 335
>sp|Q9YDK6|THSA_AERPE Thermosome alpha subunit (Thermosome subunit 1) (Chaperonin alpha
subunit)
Length = 554
Score = 206 bits (524), Expect = 8e-53
Identities = 127/328 (38%), Positives = 194/328 (59%), Gaps = 12/328 (3%)
Frame = +1
Query: 1 ILSRGADEERAETARMSSFVGAIAIGDLVKTTLGPKGMDKILLSGSSDSITVTNDGATIL 180
IL G A ++ + A + +++K++LGP+G+DK+L+ D ITVTNDGATI+
Sbjct: 10 ILKEGTQRTYGREALRANILAARVLAEMLKSSLGPRGLDKMLVDAFGD-ITVTNDGATIV 68
Query: 181 KSIGVDNPAAKILVEMSKVQDDEVGDGTTSVVVLASELLREAEQLISQKLHPQTIISGWR 360
K + + +PAAK+LVE++K QD EVGDGTTSVVVLA LL +AE+L+ + LHP II G+
Sbjct: 69 KEMEIQHPAAKLLVEVAKAQDAEVGDGTTSVVVLAGALLEKAEKLLDENLHPTIIIEGYT 128
Query: 361 KACAEASLALKQSARSSTEFPSTFEDE--LLNIARTTLSSKIL--TQHKDKFAKLAVDAV 528
KA EA + ++A P ED+ L IA TTL+SK + +DK + +DA+
Sbjct: 129 KAMEEALRLVDEAA-----VPVEVEDDSVLRRIAETTLASKFVGTGPERDKIISMVIDAI 183
Query: 529 TRLKGSG-------NLEAIQIIKKLGGLLSDSYLDEGFLLEKK-VGVNQPKRIENAKILI 684
+ +L+ ++I KK GG L DS L G +L+K+ V PKR+ENAKIL+
Sbjct: 184 RTVAEKRPDGGYEVDLDYVKIEKKKGGSLLDSKLVRGIVLDKEVVHPAMPKRVENAKILV 243
Query: 685 ANTPMDADKIKVFGSKIKVDAVSKIADLEEAEKQKMREKVEKIAKHGCNVFINRQLIYNY 864
+ P++ K ++ +KI+V + K+ E E + +R+ VEKIA G NV I ++ I
Sbjct: 244 LDAPLEVQKPEL-TTKIRVTDIEKLESFLEEETRMLRDMVEKIAATGANVVITQKGIDEV 302
Query: 865 PEQLFSMKGIMAIEHADFEGVERLSLVT 948
+ + KGI+A+ +E+++ T
Sbjct: 303 AQHFLAKKGILAVRRVKRSDIEKVAKAT 330
>sp|Q9V2T3|THSB_DESMO Thermosome beta subunit (Thermosome subunit 2) (Chaperonin beta
subunit)
Length = 502
Score = 201 bits (512), Expect = 2e-51
Identities = 120/310 (38%), Positives = 190/310 (61%), Gaps = 7/310 (2%)
Frame = +1
Query: 40 ARMSSFVGAIAIGDLVKTTLGPKGMDKILLSGSSDSITVTNDGATILKSIGVDNPAAKIL 219
A ++ + A AI +++KTT GPKGMDK+L+ D +T+TNDGATIL + +PAAK+L
Sbjct: 8 ALRTNILAARAISEMIKTTYGPKGMDKMLVDALGD-VTITNDGATILDKAEIQHPAAKML 66
Query: 220 VEMSKVQDDEVGDGTTSVVVLASELLREAEQLISQKLHPQTIISGWRKACAEASLALKQS 399
V+++K QD EVGDGT V+LA ELL+ AE+L+ + +HP IISG+R A EA L Q
Sbjct: 67 VQVAKSQDSEVGDGTKRAVILAGELLKYAEELLDKNIHPTVIISGYRMAMEEALKILDQM 126
Query: 400 ARSSTEFPSTFEDELLNIARTTLSSKILTQHKDKFAKLAVDAVTRL------KGSGNLEA 561
A E+ L +ART+L+SK + ++ FA +AV AV ++ K +L+
Sbjct: 127 AE---PIDLNNEELLRKVARTSLTSKAVHDAREFFADIAVKAVKQVVEKRGDKNYVDLDN 183
Query: 562 IQIIKKLGGLLSDSYLDEGFLLEKK-VGVNQPKRIENAKILIANTPMDADKIKVFGSKIK 738
IQIIKK GG L DS L G +L+K+ V P+R+ENAKI++ + P++ +K ++ ++I+
Sbjct: 184 IQIIKKYGGALLDSMLVYGIVLDKEVVHPGMPRRVENAKIVLLDAPLEIEKPEI-DAEIR 242
Query: 739 VDAVSKIADLEEAEKQKMREKVEKIAKHGCNVFINRQLIYNYPEQLFSMKGIMAIEHADF 918
++ ++ + E++ + + V+KIA G NV + ++ I + + KGI+A+
Sbjct: 243 INDPEQLEKFLQQEEEILMKMVDKIASVGANVVVCQKGIDEVAQHFLAKKGILAVRRVKR 302
Query: 919 EGVERLSLVT 948
+E+L T
Sbjct: 303 SDLEKLERAT 312
>sp|O26885|THSB_METTH Thermosome beta subunit (Thermosome subunit 2) (Chaperonin beta
subunit)
Length = 538
Score = 194 bits (494), Expect = 2e-49
Identities = 112/319 (35%), Positives = 188/319 (58%), Gaps = 3/319 (0%)
Frame = +1
Query: 1 ILSRGADEERAETARMSSFVGAIAIGDLVKTTLGPKGMDKILLSGSSDSITVTNDGATIL 180
+L G A+ + + + + V+TTLGPKGMDK+L+ D I VTNDG TIL
Sbjct: 10 VLPEGTSRYLGRDAQRMNILAGKILAETVRTTLGPKGMDKMLVDSLGD-IVVTNDGVTIL 68
Query: 181 KSIGVDNPAAKILVEMSKVQDDEVGDGTTSVVVLASELLREAEQLISQKLHPQTIISGWR 360
K + +++PAAK+LVE++K Q+DEVGDGTT+ V++A ELL++AE L+ ++HP I G+R
Sbjct: 69 KEMDIEHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKKAENLLEMEIHPTIIAMGYR 128
Query: 361 KACAEASLALKQSARSSTEFPSTFEDELLNIARTTLSSKILTQHKDKFAKLAVDAVTRLK 540
+A +A L A +++ D L+ +A T ++ K + ++ A+L VDAV +++
Sbjct: 129 QAAEKAQEILDDIAIDASD-----RDTLMKVAMTAMTGKGTEKAREPLAELIVDAVKQVE 183
Query: 541 GSGNLEA--IQIIKKLGGLLSDSYLDEGFLLEK-KVGVNQPKRIENAKILIANTPMDADK 711
G +E I+I KK G + DS L +G +++K +V PK++ENAKI + N P++ +
Sbjct: 184 EDGEVEKDHIKIEKKEGAAVDDSTLVQGVIIDKERVHPGMPKKVENAKIALLNCPIEVKE 243
Query: 712 IKVFGSKIKVDAVSKIADLEEAEKQKMREKVEKIAKHGCNVFINRQLIYNYPEQLFSMKG 891
+V ++I++ S++ E E+Q +R+ V I G NV ++ I + + + G
Sbjct: 244 TEV-DAEIRITDPSQMQAFIEQEEQMIRDMVNSIVDTGANVLFCQKGIDDLAQHYLAKAG 302
Query: 892 IMAIEHADFEGVERLSLVT 948
++A+ +E+LS T
Sbjct: 303 VLAVRRVKKSDMEKLSKAT 321
>sp|Q9V2T5|THSA_SULAC Thermosome alpha subunit (Thermosome subunit 1) (Chaperonin alpha
subunit) (Thermophilic factor 55 alpha) (TF55-alpha)
Length = 558
Score = 193 bits (491), Expect = 5e-49
Identities = 117/328 (35%), Positives = 191/328 (58%), Gaps = 16/328 (4%)
Frame = +1
Query: 1 ILSRGADEERAETARMSSFVGAIAIGDLVKTTLGPKGMDKILLSGSSDSITVTNDGATIL 180
+ G A ++ + A+ + +++K++LGP+G+DK+L+ D +T+TNDGATI+
Sbjct: 7 LFKEGTSRSSGRDALRNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGD-VTITNDGATIV 65
Query: 181 KSIGVDNPAAKILVEMSKVQDDEVGDGTTSVVVLASELLREAEQLISQKLHPQTIISGWR 360
K + + +PAAK+LVE +K QD EVGDGTTS VVLA LL +AE+L+ Q +HP II G++
Sbjct: 66 KEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKAEELLEQNVHPTIIIDGYK 125
Query: 361 KACAEA-----SLALKQSARSSTEFPSTFEDELLNIARTTLSSKIL---TQHKDKFAKLA 516
KA +A L+LK + T + +L I TT+SSK + + DK L
Sbjct: 126 KALTKALEIIDQLSLKIDVNDLSS--PTAKAQLKKIVSTTMSSKFIAGGAEEIDKIIDLV 183
Query: 517 VDAVT-----RLKGSGN--LEAIQIIKKLGGLLSDSYLDEGFLLEKK-VGVNQPKRIENA 672
+DA+T R G+ N L+ I+I KK GG + DS L G +L+K+ V P+R+E A
Sbjct: 184 IDAITIVAEKRPDGTYNVPLDLIKIDKKKGGSIEDSILVHGLVLDKEVVHAGMPRRVEKA 243
Query: 673 KILIANTPMDADKIKVFGSKIKVDAVSKIADLEEAEKQKMREKVEKIAKHGCNVFINRQL 852
KI + + ++ +K ++ +KI + + +I + E + ++E V+K+A G NV I ++
Sbjct: 244 KIAVLDAALEVEKPEI-SAKISITSPEQIKSFLDEEARYLKEMVDKLASIGANVVICQKG 302
Query: 853 IYNYPEQLFSMKGIMAIEHADFEGVERL 936
I + + + KGI+A+ +E+L
Sbjct: 303 IDDVAQHFLAKKGILAVRRVKRSDIEKL 330
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.314 0.131 0.347
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,531,002
Number of Sequences: 369166
Number of extensions: 1579819
Number of successful extensions: 5125
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4310
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9846996650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)