Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_005_E16
(974 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P68372|TBBX_MOUSE Tubulin beta-? chain >gi|55977480|sp|P... 587 e-167
sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin) 586 e-167
sp|P30883|TBB4_XENLA Tubulin beta-4 chain 585 e-167
sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain >gi|56754798|sp|P... 583 e-166
sp|Q9NFZ6|TBB2_ECHMU Tubulin beta-2 chain (Beta-tubulin 2) 580 e-165
sp|Q9D6F9|TBB4_MOUSE Tubulin beta-4 chain 580 e-165
sp|P02554|TBB_PIG Tubulin beta chain 578 e-165
sp|P09206|TBB3_CHICK Tubulin beta-3 chain (Beta-tubulin cla... 578 e-165
sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin) 578 e-165
sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin cla... 578 e-165
>sp|P68372|TBBX_MOUSE Tubulin beta-? chain
sp|P68371|TBBX_HUMAN Tubulin beta-? chain (Tubulin beta-2 chain)
Length = 445
Score = 587 bits (1512), Expect = e-167
Identities = 283/310 (91%), Positives = 290/310 (93%)
Frame = +2
Query: 44 MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 223
MREIVHLQAGQCGNQIG+KFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 224 PRAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIV 403
PRAVLVDLEPGTMDSVR+GPFGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 404 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVV 583
RKEAESCDCLQGFQ KIREEYPDR+M TFSVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 584 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 763
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 764 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMM 943
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 944 AACDPRHGRY 973
AACDPRHGRY
Sbjct: 301 AACDPRHGRY 310
>sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin)
Length = 447
Score = 586 bits (1510), Expect = e-167
Identities = 282/310 (90%), Positives = 290/310 (93%)
Frame = +2
Query: 44 MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 223
MREIVH+QAGQCGNQIG+KFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 224 PRAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIV 403
PRAVLVDLEPGTMDSVR+GPFGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 404 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVV 583
RKEAESCDCLQGFQ KIREEYPDR+M TFSVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 584 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 763
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 764 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMM 943
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 944 AACDPRHGRY 973
AACDPRHGRY
Sbjct: 301 AACDPRHGRY 310
>sp|P30883|TBB4_XENLA Tubulin beta-4 chain
Length = 445
Score = 585 bits (1507), Expect = e-167
Identities = 282/310 (90%), Positives = 289/310 (93%)
Frame = +2
Query: 44 MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 223
MREIVHLQAGQCGNQIG+KFWEVISDEHGIDPTG YHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGAYHGDSDLQLERINVYYNEATGGKYV 60
Query: 224 PRAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIV 403
PRAVLVDLEPGTMDSVR+GPFGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 404 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVV 583
RKEAESCDCLQGFQ KIREEYPDR+M TFSVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 584 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 763
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 764 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMM 943
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 944 AACDPRHGRY 973
AACDPRHGRY
Sbjct: 301 AACDPRHGRY 310
>sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain
sp|P69895|TBB2_MACMU Tubulin beta-2 chain
sp|P07437|TBB2_HUMAN Tubulin beta-2 chain
sp|P09244|TBB7_CHICK Tubulin beta-7 chain (Tubulin beta 4')
sp|P99024|TBB5_MOUSE Tubulin beta-5 chain
sp|P69897|TBB5_RAT Tubulin beta-5 chain
sp|P69893|TBB1_CRIGR Tubulin beta-1 chain (Beta-tubulin isotype I) (Class I beta
tubulin)
Length = 444
Score = 583 bits (1503), Expect = e-166
Identities = 279/310 (90%), Positives = 290/310 (93%)
Frame = +2
Query: 44 MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 223
MREIVH+QAGQCGNQIG+KFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60
Query: 224 PRAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIV 403
PRA+LVDLEPGTMDSVR+GPFGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 404 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVV 583
RKEAESCDCLQGFQ KIREEYPDR+M TFSVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 584 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 763
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 764 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMM 943
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300
Query: 944 AACDPRHGRY 973
AACDPRHGRY
Sbjct: 301 AACDPRHGRY 310
>sp|Q9NFZ6|TBB2_ECHMU Tubulin beta-2 chain (Beta-tubulin 2)
Length = 445
Score = 580 bits (1495), Expect = e-165
Identities = 276/310 (89%), Positives = 290/310 (93%)
Frame = +2
Query: 44 MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 223
MREIVH+QAGQCGNQIG+KFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYV 60
Query: 224 PRAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIV 403
PRA+LVDLEPGTMDSVRAGPFGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD++
Sbjct: 61 PRAILVDLEPGTMDSVRAGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVI 120
Query: 404 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVV 583
RKEAESCDCLQGFQ KIREEYPDR+M+T+SVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVV 180
Query: 584 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 763
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL+ PTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSNPTYGDLNHLVSATMSGVTTCL 240
Query: 764 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMM 943
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL+VPELTQQ+FDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMM 300
Query: 944 AACDPRHGRY 973
AACDPRHGRY
Sbjct: 301 AACDPRHGRY 310
>sp|Q9D6F9|TBB4_MOUSE Tubulin beta-4 chain
Length = 444
Score = 580 bits (1494), Expect = e-165
Identities = 279/310 (90%), Positives = 288/310 (92%)
Frame = +2
Query: 44 MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 223
MREIVHLQAGQCGNQIG+KFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG YV
Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 60
Query: 224 PRAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIV 403
PRAVLVDLEPGTMDSVR+GPFGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD+V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 120
Query: 404 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVV 583
RKEAESCDCLQGFQ KIREE+PDR+M TFSVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV 180
Query: 584 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 763
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 764 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMM 943
RFPGQLNADLRKLAVNMVPFPRLHFFMPG APLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGLAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 944 AACDPRHGRY 973
AACDPRHGRY
Sbjct: 301 AACDPRHGRY 310
>sp|P02554|TBB_PIG Tubulin beta chain
Length = 445
Score = 578 bits (1491), Expect = e-165
Identities = 277/310 (89%), Positives = 288/310 (92%)
Frame = +2
Query: 44 MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 223
MREIVH+QAGQCGNQIG+KFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEA G KYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60
Query: 224 PRAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIV 403
PRA+LVDLEPGTMDSVR+GPFGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 404 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVV 583
RKE+ESCDCLQGFQ KIREEYPDR+M TFSVVPSPKVSDTVV
Sbjct: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 584 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 763
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 764 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMM 943
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 944 AACDPRHGRY 973
AACDPRHGRY
Sbjct: 301 AACDPRHGRY 310
>sp|P09206|TBB3_CHICK Tubulin beta-3 chain (Beta-tubulin class-IV)
Length = 445
Score = 578 bits (1490), Expect = e-165
Identities = 279/310 (90%), Positives = 288/310 (92%)
Frame = +2
Query: 44 MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 223
MREIVHLQAGQCGNQIG+KFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 224 PRAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIV 403
PRAVLVDLEPGTMDSVR+GPF QIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFRQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 404 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVV 583
RKEAESCDCLQGFQ KIREEYPDR+M TFSVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 584 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 763
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 764 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMM 943
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVP+LTQQ+FDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPDLTQQMFDAKNMM 300
Query: 944 AACDPRHGRY 973
AAC+P HGRY
Sbjct: 301 AACEPGHGRY 310
>sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin)
Length = 445
Score = 578 bits (1490), Expect = e-165
Identities = 278/310 (89%), Positives = 289/310 (93%)
Frame = +2
Query: 44 MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 223
MREI+HLQAGQCGNQIG+KFWEVISDEHGIDP+GTYHGD++LQLERINVYYNEATGGKYV
Sbjct: 1 MREILHLQAGQCGNQIGAKFWEVISDEHGIDPSGTYHGDNELQLERINVYYNEATGGKYV 60
Query: 224 PRAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIV 403
PRAVLVDLEPGTMDSVR+G FGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 404 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVV 583
RKEAESCDCLQGFQ KIREEYPDR+M TFSVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 584 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 763
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 764 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMM 943
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 944 AACDPRHGRY 973
AACDPRHGRY
Sbjct: 301 AACDPRHGRY 310
>sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin class-II)
Length = 445
Score = 578 bits (1490), Expect = e-165
Identities = 276/310 (89%), Positives = 289/310 (93%)
Frame = +2
Query: 44 MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 223
MREIVH+QAGQCGNQIG+KFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG KYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
Query: 224 PRAVLVDLEPGTMDSVRAGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDIV 403
PRA+LVDLEPGTMDSVR+GPFGQIFRPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 404 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVPSPKVSDTVV 583
RKE+ESCDCLQGFQ KIREEYPDR+M TFSV+PSPKVSDTVV
Sbjct: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
Query: 584 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 763
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 764 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMM 943
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FD+KNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
Query: 944 AACDPRHGRY 973
AACDPRHGRY
Sbjct: 301 AACDPRHGRY 310
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,200,215
Number of Sequences: 369166
Number of extensions: 2121690
Number of successful extensions: 5962
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5389
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10191921135
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)