Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_005_E08
(576 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P28797|GRN_CAVPO Granulins precursor (Proepithelin) (PEP... 79 8e-15
sp|P28798|GRN_MOUSE Granulins precursor (Acrogranin) (Proep... 72 1e-12
sp|P23785|GRN_RAT Granulins precursor [Contains: Acrogranin... 71 2e-12
sp|P28799|GRN_HUMAN Granulins precursor (Proepithelin) (PEP... 70 3e-12
sp|P80059|PMD1_LOCMI Pars intercerebralis major peptide D1 ... 58 2e-08
sp|P80930|ENA1_HORSE Antimicrobial peptide eNAP-1 55 1e-07
sp|P81014|GRN2_CYPCA Granulin-2 55 1e-07
sp|P81013|GRN1_CYPCA Granulin-1 50 4e-06
sp|P81015|GRN3_CYPCA Granulin-3 49 1e-05
sp|P25776|ORYA_ORYSA Oryzain alpha chain precursor 46 8e-05
>sp|P28797|GRN_CAVPO Granulins precursor (Proepithelin) (PEPI) [Contains: Acrogranin;
Granulin-1; Granulin-2; Granulin-3; Granulin-4;
Granulin-5; Granulin-6; Granulin-7]
Length = 591
Score = 79.0 bits (193), Expect = 8e-15
Identities = 35/115 (30%), Positives = 53/115 (46%)
Frame = +1
Query: 88 NAVSCNNKLNRCPEGTICDFENKRCIPHSNKQIELSGDELMDSDGIRIPKYSIEKESLYE 267
NA+ C++ L+ CP+ T+CD RC+ + + L+ ++P +++
Sbjct: 236 NAICCSDHLHCCPQDTVCDLRQSRCLSQNKAKTLLT----------KLPSWTVWDVE--- 282
Query: 268 LYVNVFHKKYCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRC 432
C CP QTCC + G++GCCPF VCC D CCP RC
Sbjct: 283 ----------CDQEVSCPEGQTCCRLQSGKWGCCPFPKAVCCEDHVHCCPERFRC 327
Score = 70.5 bits (171), Expect = 3e-12
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Frame = +1
Query: 91 AVSCNNKLNRCPEGTICDFENKRCI------PHSNKQIELSGDELMDSDGIRIPKYSIEK 252
A C ++++ CP G CD + RC+ P + K + ++G + +
Sbjct: 141 ASCCEDRVHCCPHGASCDLVHIRCVTALGSHPLTTK-LPAQRTNYTGAEGTPVVSPGLLP 199
Query: 253 ESLYELYVNVFHKKYCPD-RKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHR 429
+L + CPD R CP TCCL++ G YGCCP N +CC D CCP++
Sbjct: 200 AALPTSVI-------CPDSRSQCPDDTTCCLLASGEYGCCPMPNAICCSDHLHCCPQDTV 252
Query: 430 C 432
C
Sbjct: 253 C 253
Score = 69.7 bits (169), Expect = 5e-12
Identities = 36/119 (30%), Positives = 52/119 (43%)
Frame = +1
Query: 88 NAVSCNNKLNRCPEGTICDFENKRCIPHSNKQIELSGDELMDSDGIRIPKYSIEKESLYE 267
+AV C + + CP G C+ + + C ++ D + P + +
Sbjct: 468 HAVCCEDGQHCCPAGYTCNVKARSC------------EKAADGAHLAAPLAVGSTGGVMD 515
Query: 268 LYVNVFHKKYCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRCIKRG 444
+ C DR C QTCC SRG + CCPF+ GVCC D+R CCP C +G
Sbjct: 516 VA--------CGDRHFCHDEQTCCRDSRGGWACCPFHQGVCCKDQRHCCPAGFHCESQG 566
Score = 53.9 bits (128), Expect = 3e-07
Identities = 34/128 (26%), Positives = 45/128 (35%)
Frame = +1
Query: 49 IISGGTEMFDTFENAVSCNNKLNRCPEGTICDFENKRCIPHSNKQIELSGDELMDSDGIR 228
+ + GT F A++C + + CP G C + CI I L G ++
Sbjct: 61 LTAAGTAACCPFSQAMACGDGHHCCPYGFHCSTDGGTCI--QRPDIHLLG-------AVQ 111
Query: 229 IPKYSIEKESLYELYVNVFHKKYCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRT 408
P E CP TCC + G +GCCP CC DR
Sbjct: 112 CPGGEFE----------------------CPDSSTCCHMLDGSWGCCPMPQASCCEDRVH 149
Query: 409 CCPRNHRC 432
CCP C
Sbjct: 150 CCPHGASC 157
Score = 52.4 bits (124), Expect = 8e-07
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Frame = +1
Query: 94 VSCNNKLNRCPEGTICDFENKR--CIPHSNKQIELSGDELMDSDGIRIPKYSIEKESLYE 267
+SC+ ++ P C + C P S + ++G+ D + + EK + +
Sbjct: 376 ISCDEVVSCRPGNICCRLASGEWGCCPSSEGYLCMAGERCQVGD-----RLAPEKMAAHL 430
Query: 268 LYVNVFHKKYCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRC 432
+ ++ C CP QTCC G + CC + VCC D + CCP + C
Sbjct: 431 MSLSQTTDVGCDQHASCPVRQTCCPKLGGGWACCQLPHAVCCEDGQHCCPAGYTC 485
Score = 42.0 bits (97), Expect = 0.001
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +1
Query: 298 CPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRCIKRG 444
C CP +C L + G CCPF + C D CCP C G
Sbjct: 47 CQSPANCPIGHSCVLTAAGTAACCPFSQAMACGDGHHCCPYGFHCSTDG 95
>sp|P28798|GRN_MOUSE Granulins precursor (Acrogranin) (Proepithelin) (PEPI) (PC
cell-derived growth factor) (PCDGF) [Contains: Granulin
1; Granulin 2; Granulin 3; Granulin 4; Granulin 5;
Granulin 6; Granulin 7]
Length = 589
Score = 72.0 bits (175), Expect = 1e-12
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Frame = +1
Query: 91 AVSCNNKLNRCPEGTICDFENKRCIPHSNKQIELSGDELMDSDGIRIPKYSIEKESLYEL 270
A C ++++ CP G CD + RC+ + L K+ +K +
Sbjct: 154 ASCCEDRVHCCPHGASCDLVHTRCVSPTGTHTLLK-------------KFPAQKTNRA-- 198
Query: 271 YVNVFHKKYCPDRKI-CPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRC 432
V++ CPD K CP TCC + G+YGCCP N +CC D CCP++ C
Sbjct: 199 -VSLPFSVVCPDAKTQCPDDSTCCELPTGKYGCCPMPNAICCSDHLHCCPQDTVC 252
Score = 70.9 bits (172), Expect = 2e-12
Identities = 33/115 (28%), Positives = 52/115 (45%)
Frame = +1
Query: 88 NAVSCNNKLNRCPEGTICDFENKRCIPHSNKQIELSGDELMDSDGIRIPKYSIEKESLYE 267
NA+ C++ L+ CP+ T+CD +C+ + L+ ++P Y +++
Sbjct: 235 NAICCSDHLHCCPQDTVCDLIQSKCLSKNYTTDLLT----------KLPGYPVKEVK--- 281
Query: 268 LYVNVFHKKYCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRC 432
C CP TCC ++ G +GCCPF VCC D CCP +C
Sbjct: 282 ----------CDMEVSCPEGYTCCRLNTGAWGCCPFAKAVCCEDHIHCCPAGFQC 326
Score = 66.6 bits (161), Expect = 4e-11
Identities = 38/127 (29%), Positives = 51/127 (40%), Gaps = 6/127 (4%)
Frame = +1
Query: 82 FENAVSCNNKLNRCPEGTICDFENKRC------IPHSNKQIELSGDELMDSDGIRIPKYS 243
F AV C + ++ CP G C E C +P K I +R+P
Sbjct: 307 FAKAVCCEDHIHCCPAGFQCHTEKGTCEMGILQVPWMKKVIA----------PLRLPDPQ 356
Query: 244 IEKESLYELYVNVFHKKYCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRN 423
I K C D CP TCC ++ G +GCCP VCC D + CCP+
Sbjct: 357 ILKSDTP-----------CDDFTRCPTNNTCCKLNSGDWGCCPIPEAVCCSDNQHCCPQG 405
Query: 424 HRCIKRG 444
C+ +G
Sbjct: 406 FTCLAQG 412
Score = 63.2 bits (152), Expect = 5e-10
Identities = 33/119 (27%), Positives = 50/119 (42%)
Frame = +1
Query: 88 NAVSCNNKLNRCPEGTICDFENKRCIPHSNKQIELSGDELMDSDGIRIPKYSIEKESLYE 267
+AV C ++ + CP G C+ + + C K ++ ++ + G ++
Sbjct: 469 HAVCCEDRQHCCPAGYTCNVKARTC----EKDVDFIQPPVLLTLGPKVGNVE-------- 516
Query: 268 LYVNVFHKKYCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRCIKRG 444
C + C QTCC S G + CCP+ GVCC D R CCP C RG
Sbjct: 517 ----------CGEGHFCHDNQTCCKDSAGVWACCPYLKGVCCRDGRHCCPGGFHCSARG 565
Score = 60.1 bits (144), Expect = 4e-09
Identities = 33/124 (26%), Positives = 44/124 (35%)
Frame = +1
Query: 61 GTEMFDTFENAVSCNNKLNRCPEGTICDFENKRCIPHSNKQIELSGDELMDSDGIRIPKY 240
GT F VSC + + CP+G C + K C S+ + ++ P
Sbjct: 79 GTSSCCPFSKGVSCGDGYHCCPQGFHCSADGKSCFQMSDNPL----------GAVQCPGS 128
Query: 241 SIEKESLYELYVNVFHKKYCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPR 420
E CP TCC++ G +GCCP CC DR CCP
Sbjct: 129 QFE----------------------CPDSATCCIMVDGSWGCCPMPQASCCEDRVHCCPH 166
Query: 421 NHRC 432
C
Sbjct: 167 GASC 170
Score = 52.8 bits (125), Expect = 6e-07
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1
Query: 298 CPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRC 432
C CP QTCC +G + CC + VCC DR+ CCP + C
Sbjct: 442 CDQHTSCPVGQTCCPSLKGSWACCQLPHAVCCEDRQHCCPAGYTC 486
Score = 45.4 bits (106), Expect = 1e-04
Identities = 19/49 (38%), Positives = 21/49 (42%)
Frame = +1
Query: 298 CPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRCIKRG 444
C CP +C L G CCPF GV C D CCP+ C G
Sbjct: 61 CQTHGHCPAGYSCLLTVSGTSSCCPFSKGVSCGDGYHCCPQGFHCSADG 109
>sp|P23785|GRN_RAT Granulins precursor [Contains: Acrogranin; Granulin-1 (Granulin G);
Granulin-2 (Granulin F); Granulin-3 (Granulin B)
(Epithelin-2); Granulin-4 (Granulin A) (Epithelin-1);
Granulin-5 (Granulin C); Granulin-6 (Granulin D);
Granulin-7 (Granulin E)]
Length = 588
Score = 70.9 bits (172), Expect = 2e-12
Identities = 39/123 (31%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Frame = +1
Query: 91 AVSCNNKLNRCPEGTICDFENKRCIPHSNKQIELSGDELMDSDGIRIPKYSIEKESLYEL 270
A C ++++ CP G CD + RCI + L K+ ++ +
Sbjct: 154 ASCCEDRVHCCPHGASCDLVHTRCISPTGTHPLLK-------------KFPAQRTNRAVA 200
Query: 271 YVNVFHKKYCPDRKI-CPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRC--IKR 441
+V CPD K CP TCC + G+YGCCP N +CC D CCP++ C I+
Sbjct: 201 SFSV----VCPDAKTQCPDDSTCCELPTGKYGCCPMPNAICCSDHLHCCPQDTVCDLIQS 256
Query: 442 GCI 450
CI
Sbjct: 257 KCI 259
Score = 70.9 bits (172), Expect = 2e-12
Identities = 35/115 (30%), Positives = 51/115 (44%)
Frame = +1
Query: 88 NAVSCNNKLNRCPEGTICDFENKRCIPHSNKQIELSGDELMDSDGIRIPKYSIEKESLYE 267
NA+ C++ L+ CP+ T+CD +CI +LM ++P Y + +
Sbjct: 234 NAICCSDHLHCCPQDTVCDLIQSKCISKDYTT------DLMT----KLPGYPVNEVK--- 280
Query: 268 LYVNVFHKKYCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRC 432
C CP TCC ++ G +GCCPF VCC D CCP +C
Sbjct: 281 ----------CDLEVSCPDGYTCCRLNTGAWGCCPFTKAVCCEDHIHCCPAGFQC 325
Score = 67.0 bits (162), Expect = 3e-11
Identities = 37/130 (28%), Positives = 53/130 (40%), Gaps = 9/130 (6%)
Frame = +1
Query: 82 FENAVSCNNKLNRCPEGTICDFENKRC------IPHSNK---QIELSGDELMDSDGIRIP 234
F AV C + ++ CP G C E C +P K + L +++ +D +P
Sbjct: 306 FTKAVCCEDHIHCCPAGFQCHTETGTCELGVLQVPWMKKVTASLSLPDPQILKND---VP 362
Query: 235 KYSIEKESLYELYVNVFHKKYCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCC 414
C D CP TCC +S G +GCCP VCC D + CC
Sbjct: 363 ---------------------CDDFSSCPSNNTCCRLSSGDWGCCPMPEAVCCLDHQHCC 401
Query: 415 PRNHRCIKRG 444
P+ +C+ G
Sbjct: 402 PQGFKCMDEG 411
Score = 58.2 bits (139), Expect = 1e-08
Identities = 36/124 (29%), Positives = 47/124 (37%)
Frame = +1
Query: 61 GTEMFDTFENAVSCNNKLNRCPEGTICDFENKRCIPHSNKQIELSGDELMDSDGIRIPKY 240
GT F VSC++ + CP G C + K C QI D L+ + ++ P
Sbjct: 79 GTSSCCPFSEGVSCDDGQHCCPRGFHCSADGKSC-----SQI---SDSLLGA--VQCPGS 128
Query: 241 SIEKESLYELYVNVFHKKYCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPR 420
E CP TCC++ G +GCCP CC DR CCP
Sbjct: 129 QFE----------------------CPDSATCCIMIDGSWGCCPMPQASCCEDRVHCCPH 166
Query: 421 NHRC 432
C
Sbjct: 167 GASC 170
Score = 57.0 bits (136), Expect = 3e-08
Identities = 32/119 (26%), Positives = 48/119 (40%)
Frame = +1
Query: 88 NAVSCNNKLNRCPEGTICDFENKRCIPHSNKQIELSGDELMDSDGIRIPKYSIEKESLYE 267
+AV C ++ + CP G C+ + + C + ++ S D S +
Sbjct: 468 HAVCCEDRQHCCPAGYTCNVKARTCEKDAGS-VQPSMDLTFGSKVGNVE----------- 515
Query: 268 LYVNVFHKKYCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRCIKRG 444
C C Q+CC S+G + CCP+ GVCC D R CCP C +G
Sbjct: 516 ----------CGAGHFCHDNQSCCKDSQGGWACCPYVKGVCCRDGRHCCPIGFHCSAKG 564
Score = 53.9 bits (128), Expect = 3e-07
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = +1
Query: 121 CP-EGTICDFENKRCIPHSNKQIELSGDELMDSDGIRIPKYSIEKESLYELYVNVFHKKY 297
CP +C +++ C P K ++ + D + K + + +L + H
Sbjct: 386 CPMPEAVCCLDHQHCCPQGFKCMDEGYCQKGDRMVAGLEKMPVRQTTLLQ------HGDI 439
Query: 298 -CPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRC 432
C CP QTCC +G + CC + VCC DR+ CCP + C
Sbjct: 440 GCDQHTSCPVGQTCCPSLKGSWACCQLPHAVCCEDRQHCCPAGYTC 485
Score = 49.7 bits (117), Expect = 5e-06
Identities = 21/49 (42%), Positives = 23/49 (46%)
Frame = +1
Query: 298 CPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRCIKRG 444
C R CP +C L G CCPF GV C D + CCPR C G
Sbjct: 61 CQIRDHCPDGYSCLLTVSGTSSCCPFSEGVSCDDGQHCCPRGFHCSADG 109
>sp|P28799|GRN_HUMAN Granulins precursor (Proepithelin) (PEPI) [Contains: Acrogranin;
Paragranulin; Granulin-1 (Granulin G); Granulin-2
(Granulin F); Granulin-3 (Granulin B); Granulin-4
(Granulin A); Granulin-5 (Granulin C); Granulin-6
(Granulin D); Granulin-7 (Granulin E)]
Length = 593
Score = 70.5 bits (171), Expect = 3e-12
Identities = 33/115 (28%), Positives = 48/115 (41%)
Frame = +1
Query: 88 NAVSCNNKLNRCPEGTICDFENKRCIPHSNKQIELSGDELMDSDGIRIPKYSIEKESLYE 267
NA C++ L+ CP+ T+CD +C+ N +L ++P +++
Sbjct: 236 NATCCSDHLHCCPQDTVCDLIQSKCLSKENATTDLL---------TKLPAHTVGDVK--- 283
Query: 268 LYVNVFHKKYCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRC 432
C CP TCC + G +GCCPF VCC D CCP C
Sbjct: 284 ----------CDMEVSCPDGYTCCRLQSGAWGCCPFTQAVCCEDHIHCCPAGFTC 328
Score = 69.7 bits (169), Expect = 5e-12
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 2/123 (1%)
Frame = +1
Query: 82 FENAVSCNNKLNRCPEGTICDFENKRCI--PHSNKQIELSGDELMDSDGIRIPKYSIEKE 255
F AV C + ++ CP G CD + C PH +E + L +P K
Sbjct: 309 FTQAVCCEDHIHCCPAGFTCDTQKGTCEQGPHQVPWMEKAPAHLS------LPDPQALKR 362
Query: 256 SLYELYVNVFHKKYCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRCI 435
+ C + CP TCC ++ G +GCCP VCC D + CCP+ + C+
Sbjct: 363 DVP-----------CDNVSSCPSSDTCCQLTSGEWGCCPIPEAVCCSDHQHCCPQGYTCV 411
Query: 436 KRG 444
G
Sbjct: 412 AEG 414
Score = 68.2 bits (165), Expect = 1e-11
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +1
Query: 91 AVSCNNKLNRCPEGTICDFENKRCIPHSNKQIELSGDELMDSDGIRIPKYSIEKESLYEL 270
A C ++++ CP G CD + RCI + ++P +
Sbjct: 155 ASCCEDRVHCCPHGAFCDLVHTRCITPTGTHPLAK----------KLPAQRTNRA----- 199
Query: 271 YVNVFHKKYCPD-RKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRC 432
V + CPD R CP TCC + G+YGCCP N CC D CCP++ C
Sbjct: 200 -VALSSSVMCPDARSRCPDGSTCCELPSGKYGCCPMPNATCCSDHLHCCPQDTVC 253
Score = 66.2 bits (160), Expect = 5e-11
Identities = 36/129 (27%), Positives = 54/129 (41%)
Frame = +1
Query: 58 GGTEMFDTFENAVSCNNKLNRCPEGTICDFENKRCIPHSNKQIELSGDELMDSDGIRIPK 237
GG+ +AV C ++ + CP G C+ + + C K++ + + +
Sbjct: 461 GGSWACCQLPHAVCCEDRQHCCPAGYTCNVKARSC----EKEVVSAQPATFLARSPHVGV 516
Query: 238 YSIEKESLYELYVNVFHKKYCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCP 417
+E C + C QTCC +R + CCP+ GVCC DRR CCP
Sbjct: 517 KDVE----------------CGEGHFCHDNQTCCRDNRQGWACCPYRQGVCCADRRHCCP 560
Query: 418 RNHRCIKRG 444
RC RG
Sbjct: 561 AGFRCAARG 569
Score = 59.7 bits (143), Expect = 5e-09
Identities = 34/125 (27%), Positives = 43/125 (34%), Gaps = 1/125 (0%)
Frame = +1
Query: 61 GTEMFDTFENAVSCNNKLNRCPEGTICDFENKRCIPHSNKQIELSGDELMDSDGIRIPKY 240
GT F AV+C + + CP G C + + C S
Sbjct: 79 GTSSCCPFPEAVACGDGHHCCPRGFHCSADGRSCFQRSGN-------------------- 118
Query: 241 SIEKESLYELYVNVFHKKYCPDRKI-CPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCP 417
N CPD + CP TCC++ G +GCCP CC DR CCP
Sbjct: 119 ------------NSVGAIQCPDSQFECPDFSTCCVMVDGSWGCCPMPQASCCEDRVHCCP 166
Query: 418 RNHRC 432
C
Sbjct: 167 HGAFC 171
Score = 51.6 bits (122), Expect = 1e-06
Identities = 32/114 (28%), Positives = 46/114 (40%)
Frame = +1
Query: 91 AVSCNNKLNRCPEGTICDFENKRCIPHSNKQIELSGDELMDSDGIRIPKYSIEKESLYEL 270
AV C++ + CP+G C E + C G E++ +EK
Sbjct: 394 AVCCSDHQHCCPQGYTCVAEGQ-C---------QRGSEIVAG---------LEKMPARRA 434
Query: 271 YVNVFHKKYCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRC 432
++ C CP QTCC G + CC + VCC DR+ CCP + C
Sbjct: 435 SLSHPRDIGCDQHTSCPVGQTCCPSLGGSWACCQLPHAVCCEDRQHCCPAGYTC 488
Score = 40.4 bits (93), Expect = 0.003
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 316 CPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRCIKRG 444
C +C G CCPF V C D CCPR C G
Sbjct: 67 CSAGHSCIFTVSGTSSCCPFPEAVACGDGHHCCPRGFHCSADG 109
>sp|P80059|PMD1_LOCMI Pars intercerebralis major peptide D1 (PMP-D1)
Length = 54
Score = 57.8 bits (138), Expect = 2e-08
Identities = 24/49 (48%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 310 KICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRCIK--RGCI 450
K CPG +TCC +G GCCP+ GVCC D CCP C + R CI
Sbjct: 5 KTCPGTETCCTTPQGEEGCCPYKEGVCCLDGIHCCPSGTVCDEDHRRCI 53
Score = 34.7 bits (78), Expect = 0.18
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 61 GTEMFDTFENAVSCNNKLNRCPEGTICDFENKRCI 165
G E ++ V C + ++ CP GT+CD +++RCI
Sbjct: 19 GEEGCCPYKEGVCCLDGIHCCPSGTVCDEDHRRCI 53
>sp|P80930|ENA1_HORSE Antimicrobial peptide eNAP-1
Length = 46
Score = 55.5 bits (132), Expect = 1e-07
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +1
Query: 298 CPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCP 417
C + C QTCC S+G CCP+ GVCC D+R CCP
Sbjct: 4 CGEGHFCHDXQTCCRASQGGXACCPYSQGVCCADQRHCCP 43
>sp|P81014|GRN2_CYPCA Granulin-2
Length = 57
Score = 55.1 bits (131), Expect = 1e-07
Identities = 22/46 (47%), Positives = 24/46 (52%)
Frame = +1
Query: 295 YCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRC 432
YC R CP TCC G + CCPF G CC D R CC +RC
Sbjct: 3 YCNARTTCPSRTTCCRSPFGVWYCCPFLMGQCCRDGRHCCRHGYRC 48
>sp|P81013|GRN1_CYPCA Granulin-1
Length = 57
Score = 50.1 bits (118), Expect = 4e-06
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = +1
Query: 295 YCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRC 432
+C ICP TCCL G + CCPF G CC D CC + C
Sbjct: 3 HCDAATICPDGTTCCLSPYGVWYCCPFSMGQCCRDGIHCCRHGYHC 48
>sp|P81015|GRN3_CYPCA Granulin-3
Length = 57
Score = 48.5 bits (114), Expect = 1e-05
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +1
Query: 295 YCPDRKICPGVQTCCLISRGRYGCCPFYNGVCCPDRRTCCPRNHRC 432
+C CP TCC G + CCPF G CC D R CC + C
Sbjct: 3 FCDAGITCPSGTTCCRSPFGVWYCCPFLMGQCCRDGRHCCRHGYHC 48
>sp|P25776|ORYA_ORYSA Oryzain alpha chain precursor
Length = 458
Score = 45.8 bits (107), Expect = 8e-05
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +1
Query: 298 CPDRKICPGVQTCCLISRGRY----GCCPFYNGVCCPDRRTCCPRNH 426
CPD C CC+ G+Y GCCP CC D +CCP +
Sbjct: 373 CPDSTTC-----CCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEY 414
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,222,784
Number of Sequences: 369166
Number of extensions: 1231850
Number of successful extensions: 3465
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3395
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 4275400980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)