Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_005_E03
(610 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O16305|CALM_CAEEL Calmodulin (CaM) 296 2e-80
sp|P62152|CALM_DROME Calmodulin (CaM) >gi|49037469|sp|P6215... 295 6e-80
sp|Q8STF0|CALM_STRIE Calmodulin (CaM) 293 2e-79
sp|Q9GRJ1|CALM_LUMRU Calmodulin (CaM) 293 3e-79
sp|O96081|CALMB_HALRO Calmodulin-B (CaM B) 293 3e-79
sp|Q95NR9|CALM_METSE Calmodulin (CaM) 293 3e-79
sp|O02367|CALM_CIOIN Calmodulin (CaM) (Ci-CaM) 292 4e-79
sp|Q9UB37|CALM2_BRALA Calmodulin-2 (CaM 2) 292 4e-79
sp|P21251|CALM_STIJA Calmodulin (CaM) 292 5e-79
sp|P62155|CALM_XENLA Calmodulin (CaM) >gi|49037483|sp|P6220... 291 9e-79
>sp|O16305|CALM_CAEEL Calmodulin (CaM)
Length = 149
Score = 296 bits (759), Expect = 2e-80
Identities = 149/149 (100%), Positives = 149/149 (100%)
Frame = -1
Query: 604 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 425
MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 424 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 245
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 244 EVDEMIREADIDGDGQVNYEEFVTMMTTK 158
EVDEMIREADIDGDGQVNYEEFVTMMTTK
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMTTK 149
>sp|P62152|CALM_DROME Calmodulin (CaM)
sp|P62153|CALMA_HALRO Calmodulin-A (CaM A)
sp|P62148|CALM1_BRALA Calmodulin-1 (CaM 1)
sp|P62147|CALM1_BRAFL Calmodulin-1 (CaM 1)
sp|P62154|CALM_LOCMI Calmodulin (CaM)
sp|P62145|CALM_APLCA Calmodulin (CaM)
Length = 149
Score = 295 bits (755), Expect = 6e-80
Identities = 148/149 (99%), Positives = 149/149 (100%)
Frame = -1
Query: 604 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 425
MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 424 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 245
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 244 EVDEMIREADIDGDGQVNYEEFVTMMTTK 158
EVDEMIREADIDGDGQVNYEEFVTMMT+K
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMTSK 149
>sp|Q8STF0|CALM_STRIE Calmodulin (CaM)
Length = 156
Score = 293 bits (750), Expect = 2e-79
Identities = 147/148 (99%), Positives = 148/148 (100%)
Frame = -1
Query: 601 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 422
ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 9 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 68
Query: 421 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 242
GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE
Sbjct: 69 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 128
Query: 241 VDEMIREADIDGDGQVNYEEFVTMMTTK 158
VDEMIREADIDGDGQVNYEEFVTMMT+K
Sbjct: 129 VDEMIREADIDGDGQVNYEEFVTMMTSK 156
>sp|Q9GRJ1|CALM_LUMRU Calmodulin (CaM)
Length = 149
Score = 293 bits (749), Expect = 3e-79
Identities = 147/149 (98%), Positives = 148/149 (99%)
Frame = -1
Query: 604 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 425
MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 424 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 245
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 244 EVDEMIREADIDGDGQVNYEEFVTMMTTK 158
EVDEMIREADIDGDGQVNYEEFVTMM +K
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMMSK 149
>sp|O96081|CALMB_HALRO Calmodulin-B (CaM B)
Length = 149
Score = 293 bits (749), Expect = 3e-79
Identities = 147/149 (98%), Positives = 148/149 (99%)
Frame = -1
Query: 604 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 425
MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 424 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 245
NGTIDFPEFLTMMARKMK+TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 244 EVDEMIREADIDGDGQVNYEEFVTMMTTK 158
EVDEMIREADIDGDGQVNYEEFVTMMT K
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMTCK 149
>sp|Q95NR9|CALM_METSE Calmodulin (CaM)
Length = 149
Score = 293 bits (749), Expect = 3e-79
Identities = 147/149 (98%), Positives = 148/149 (99%)
Frame = -1
Query: 604 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 425
MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 424 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 245
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 244 EVDEMIREADIDGDGQVNYEEFVTMMTTK 158
EVDEMIREADIDGDGQVNYEEFV MMT+K
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVKMMTSK 149
>sp|O02367|CALM_CIOIN Calmodulin (CaM) (Ci-CaM)
Length = 149
Score = 292 bits (748), Expect = 4e-79
Identities = 146/149 (97%), Positives = 147/149 (98%)
Frame = -1
Query: 604 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 425
MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 424 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 245
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 244 EVDEMIREADIDGDGQVNYEEFVTMMTTK 158
EVDEMIREAD+DGDGQVNYEEFV MMT K
Sbjct: 121 EVDEMIREADVDGDGQVNYEEFVNMMTNK 149
>sp|Q9UB37|CALM2_BRALA Calmodulin-2 (CaM 2)
Length = 149
Score = 292 bits (748), Expect = 4e-79
Identities = 146/149 (97%), Positives = 148/149 (99%)
Frame = -1
Query: 604 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 425
MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 424 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 245
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 244 EVDEMIREADIDGDGQVNYEEFVTMMTTK 158
EVDEM+READIDGDGQVNYEEFV MMT+K
Sbjct: 121 EVDEMVREADIDGDGQVNYEEFVEMMTSK 149
>sp|P21251|CALM_STIJA Calmodulin (CaM)
Length = 148
Score = 292 bits (747), Expect = 5e-79
Identities = 146/148 (98%), Positives = 148/148 (100%)
Frame = -1
Query: 601 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 422
ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 421 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 242
GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEE
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 241 VDEMIREADIDGDGQVNYEEFVTMMTTK 158
VDEMIREADIDGDGQVNYEEFVTMMT+K
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMMTSK 148
>sp|P62155|CALM_XENLA Calmodulin (CaM)
sp|P62204|CALM_MOUSE Calmodulin (CaM)
sp|P62157|CALM_BOVIN Calmodulin (CaM)
sp|P62151|CALM_TORCA Calmodulin (CaM)
sp|P62144|CALM_ANAPL Calmodulin (CaM)
sp|Q6YNX6|CALM_SHEEP Calmodulin (CaM)
sp|Q71UH6|CALM_PERFV Calmodulin (CaM)
sp|Q5EHV7|CALM_GECJA Calmodulin (CaM)
sp|Q6IT78|CALM_CTEID Calmodulin (CaM)
sp|P62161|CALM_RAT Calmodulin (CaM)
sp|P62160|CALM_RABIT Calmodulin (CaM)
sp|Q5RAD2|CALM_PONPY Calmodulin (CaM)
sp|P62156|CALM_ONCSP Calmodulin (CaM)
sp|P62158|CALM_HUMAN Calmodulin (CaM)
sp|P62149|CALM_CHICK Calmodulin (CaM)
sp|Q6PI52|CALM_BRARE Calmodulin (CaM)
Length = 149
Score = 291 bits (745), Expect = 9e-79
Identities = 146/149 (97%), Positives = 147/149 (98%)
Frame = -1
Query: 604 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 425
MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 424 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 245
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 244 EVDEMIREADIDGDGQVNYEEFVTMMTTK 158
EVDEMIREADIDGDGQVNYEEFV MMT K
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTAK 149
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,876,144
Number of Sequences: 369166
Number of extensions: 935488
Number of successful extensions: 5883
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4516
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4748907085
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)