Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_005_D16
(511 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9DGQ7|CDC37_TETFL Hsp90 co-chaperone Cdc37 (Hsp90 chape... 70 2e-12
sp|Q61081|CDC37_MOUSE Hsp90 co-chaperone Cdc37 (Hsp90 chape... 70 4e-12
sp|Q63692|CDC37_RAT Hsp90 co-chaperone Cdc37 (Hsp90 chapero... 70 4e-12
sp|Q16543|CDC37_HUMAN Hsp90 co-chaperone Cdc37 (Hsp90 chape... 69 5e-12
sp|O57476|CDC37_CHICK Hsp90 co-chaperone Cdc37 (Hsp90 chape... 68 1e-11
sp|Q24276|CDC37_DROME Hsp90 co-chaperone Cdc37 (Hsp90 chape... 54 2e-07
sp|Q24740|CDC37_DROVI Hsp90 co-chaperone Cdc37 (Hsp90 chape... 54 3e-07
sp|O02108|CDC37_CAEEL Probable Hsp90 co-chaperone Cdc37 (Hs... 47 3e-05
sp|Q9TKS4|MATK_PHACN Maturase K (Intron maturase) 33 0.30
sp|Q6PSC6|MATK_PHAVU Maturase K (Intron maturase) 33 0.51
>sp|Q9DGQ7|CDC37_TETFL Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein kinase-targeting
subunit) (p50Cdc37)
Length = 377
Score = 70.5 bits (171), Expect = 2e-12
Identities = 26/57 (45%), Positives = 44/57 (77%)
Frame = +1
Query: 1 QECFEKKNIEMLQEALSKMDPKEAEGHLQKCIDSGMWLPNANKKDNDEANESEASGE 171
Q+CF++K+I+MLQ+ ++KMDP EA+ H+++CIDSG+W+PN+ ++DE + E
Sbjct: 309 QKCFDEKDIQMLQDVITKMDPTEAKAHMKRCIDSGLWVPNSKMDESDEKEDGSTYEE 365
>sp|Q61081|CDC37_MOUSE Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein kinase-targeting
subunit) (p50Cdc37)
Length = 379
Score = 69.7 bits (169), Expect = 4e-12
Identities = 29/56 (51%), Positives = 45/56 (80%)
Frame = +1
Query: 1 QECFEKKNIEMLQEALSKMDPKEAEGHLQKCIDSGMWLPNANKKDNDEANESEASG 168
Q+CF+ K+++MLQ+A+SKMDP +A+ H+Q+CIDSG+W+PN+ + EA E E +G
Sbjct: 307 QKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNSK---SGEAKEGEEAG 359
>sp|Q63692|CDC37_RAT Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein kinase-targeting
subunit) (p50Cdc37)
Length = 379
Score = 69.7 bits (169), Expect = 4e-12
Identities = 29/56 (51%), Positives = 45/56 (80%)
Frame = +1
Query: 1 QECFEKKNIEMLQEALSKMDPKEAEGHLQKCIDSGMWLPNANKKDNDEANESEASG 168
Q+CF+ K+++MLQ+A+SKMDP +A+ H+Q+CIDSG+W+PN+ + EA E E +G
Sbjct: 307 QKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNSK---SGEAKEGEEAG 359
>sp|Q16543|CDC37_HUMAN Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein kinase-targeting
subunit) (p50Cdc37)
Length = 378
Score = 69.3 bits (168), Expect = 5e-12
Identities = 29/56 (51%), Positives = 44/56 (78%)
Frame = +1
Query: 1 QECFEKKNIEMLQEALSKMDPKEAEGHLQKCIDSGMWLPNANKKDNDEANESEASG 168
Q+CF+ K+++MLQ+A+SKMDP +A+ H+Q+CIDSG+W+PN+ EA E E +G
Sbjct: 306 QKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNSKA---SEAKEGEEAG 358
>sp|O57476|CDC37_CHICK Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein kinase-targeting
subunit) (p50Cdc37)
Length = 393
Score = 67.8 bits (164), Expect = 1e-11
Identities = 29/61 (47%), Positives = 45/61 (73%)
Frame = +1
Query: 1 QECFEKKNIEMLQEALSKMDPKEAEGHLQKCIDSGMWLPNANKKDNDEANESEASGEYGN 180
Q+CF+ K+++MLQ+ +S+MDP EA+ H+Q+CIDSG+W+PNA K + + A G+ G
Sbjct: 311 QKCFDAKDVQMLQDTISRMDPTEAKYHMQRCIDSGLWVPNA-KAAAEGGGQGGAHGQPGG 369
Query: 181 A 183
A
Sbjct: 370 A 370
>sp|Q24276|CDC37_DROME Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein kinase-targeting
subunit) (Enhancer of sevenless 3B)
Length = 389
Score = 54.3 bits (129), Expect = 2e-07
Identities = 20/57 (35%), Positives = 38/57 (66%)
Frame = +1
Query: 7 CFEKKNIEMLQEALSKMDPKEAEGHLQKCIDSGMWLPNANKKDNDEANESEASGEYG 177
CFE +++E+LQ+ ++ M A+ H+++C+DSG+W+PNA + D+ E ++ G
Sbjct: 304 CFESRDVELLQKTIAAMPVDVAKLHMKRCVDSGLWVPNAADLEGDKKEEDDSDDVAG 360
>sp|Q24740|CDC37_DROVI Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein kinase-targeting
subunit)
Length = 399
Score = 53.5 bits (127), Expect = 3e-07
Identities = 22/57 (38%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Frame = +1
Query: 7 CFEKKNIEMLQEALSKMDPKEAEGHLQKCIDSGMWLPNANK----KDNDEANESEAS 165
CFE ++IE+LQ+ ++ M +A+ H+++C+DSG+W+PNA D EA + E +
Sbjct: 304 CFESRDIELLQKTIATMPVDQAKYHMKRCVDSGLWVPNAADVQLGNDETEAKDDETT 360
>sp|O02108|CDC37_CAEEL Probable Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein
kinase-targeting subunit)
Length = 370
Score = 47.0 bits (110), Expect = 3e-05
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +1
Query: 1 QECFEKKNIEMLQEALSKMDPKEAEGHLQKCIDSGMWLPNANKKDNDEANESEASGE 171
++CFE +IE L+ KMD + + H +CI SG+W+P K D+D+ +E A E
Sbjct: 309 RKCFEAHDIEALKGVAQKMDEEVFKYHFDRCIASGLWVP--GKADDDDDDEEAAPAE 363
>sp|Q9TKS4|MATK_PHACN Maturase K (Intron maturase)
Length = 514
Score = 33.5 bits (75), Expect = 0.30
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 18/81 (22%)
Frame = -1
Query: 400 CAY--FFFQRKFAYYL*IKLLFYQ----LILTNTEILMNE*QLILIINRCAYFHIWNYPQ 239
C+Y FFF+ F +Y+ YQ L+L NT +L+N+ + I YF IW P+
Sbjct: 262 CSYTLFFFKDTFIHYV-----RYQGKSILVLKNTPLLINKWKYYFIYLWQCYFDIWAGPE 316
Query: 238 ------------HFPGYLVSL 212
HF GY +S+
Sbjct: 317 TIYINQLSQYSFHFLGYFLSI 337
>sp|Q6PSC6|MATK_PHAVU Maturase K (Intron maturase)
Length = 513
Score = 32.7 bits (73), Expect = 0.51
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 18/81 (22%)
Frame = -1
Query: 400 CAY--FFFQRKFAYYL*IKLLFYQ----LILTNTEILMNE*QLILIINRCAYFHIWNYPQ 239
C+Y FFF+ F +Y+ YQ L+L NT +L+N+ + + YF IW P+
Sbjct: 261 CSYTLFFFKDTFIHYV-----RYQGKSILVLKNTPLLINKWKYYFLYLWQCYFDIWAGPE 315
Query: 238 ------------HFPGYLVSL 212
HF GY +S+
Sbjct: 316 TIYINQLSQYSFHFLGYFLSI 336
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,664,322
Number of Sequences: 369166
Number of extensions: 1054746
Number of successful extensions: 2776
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2776
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3255600150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)