Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_005_C12
(933 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O08730|GLYG_RAT Glycogenin-1 322 7e-88
sp|Q9R062|GLYG_MOUSE Glycogenin-1 320 4e-87
sp|P46976|GLYG_HUMAN Glycogenin-1 317 2e-86
sp|P13280|GLYG_RABIT Glycogenin-1 316 5e-86
sp|O15488|GLYG2_HUMAN Glycogenin-2 (GN-2) (GN2) 282 1e-75
sp|P47011|GLG2_YEAST Glycogen synthesis initiator protein GLG2 123 6e-28
sp|P36143|GLG1_YEAST Glycogen synthesis initiator protein GLG1 84 7e-16
sp|Q9Y761|GNT1A_KLULA Glucose N-acetyltransferase 1-A (N-ac... 42 0.002
sp|Q6CT96|GNT1B_KLULA Glucose N-acetyltransferase 1-B (N-ac... 37 0.080
sp|Q09680|YA0C_SCHPO Hypothetical protein C5H10.12c in chro... 36 0.18
>sp|O08730|GLYG_RAT Glycogenin-1
Length = 333
Score = 322 bits (826), Expect = 7e-88
Identities = 165/313 (52%), Positives = 205/313 (65%), Gaps = 14/313 (4%)
Frame = +1
Query: 37 ALGALTLAMSLKHSGTQKELVIMITDNISEAMRNVLSQVFNHIEMVNVLDSNDVINLGLL 216
A GAL L SLK T + V++ + +S++MR VL VF+ + MV+VLDS D +L L+
Sbjct: 16 AKGALVLGSSLKQHRTTRRTVVLASPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLM 75
Query: 217 ERPELGITFTKLHCWRLVQYSKCVFMDADTLVIQNIDDLFEREELSAAPDPGWPDCFNSG 396
+RPELGIT TKLHCW L QYSKCVFMDADTLV+ NIDDLFEREELSAAPDPGWPDCFNSG
Sbjct: 76 KRPELGITLTKLHCWSLTQYSKCVFMDADTLVLSNIDDLFEREELSAAPDPGWPDCFNSG 135
Query: 397 VFVYKPSIDTYVELLQFAIDKGSFDGGDQGLLNMFFSNWSTKDIKHHLPFVYNCVSQAFY 576
VFVY+PSI+TY +LL A ++GSFDGGDQGLLN +FS W+T DI HLPFVYN S + Y
Sbjct: 136 VFVYQPSIETYNQLLHLASEQGSFDGGDQGLLNTYFSGWATTDITKHLPFVYNLSSLSIY 195
Query: 577 SYLPAYTHFRADIKVLHFIGPHKPWHHTFDSDTGTV--IFQEGCGQNYESLQLWWTTFIA 750
SYLPA+ F + KV+HF+G KPW++T++ T +V Q+ + E L LWW TF
Sbjct: 196 SYLPAFKAFGKNAKVVHFLGRTKPWNYTYNPQTKSVKCESQDPIVSHPEFLNLWWDTFTT 255
Query: 751 YTKPLLHDE-----------MGGVCGRMASLDVSSFVP-HEGKFSPKSHQQAWEHGIIDY 894
PLL M V G ++ L P + S + ++ WE G DY
Sbjct: 256 NVLPLLQHHGLVKDAGSYLMMEHVTGALSDLSFGEAPPASQPSLSSEERKERWEQGQADY 315
Query: 895 RGLDRFENIKMHL 933
G D F+NIK L
Sbjct: 316 MGADSFDNIKRKL 328
>sp|Q9R062|GLYG_MOUSE Glycogenin-1
Length = 333
Score = 320 bits (820), Expect = 4e-87
Identities = 164/313 (52%), Positives = 205/313 (65%), Gaps = 14/313 (4%)
Frame = +1
Query: 37 ALGALTLAMSLKHSGTQKELVIMITDNISEAMRNVLSQVFNHIEMVNVLDSNDVINLGLL 216
A GAL L SLK T + +V++ + +S++MR VL VF+ + MV+VLDS D +L L+
Sbjct: 16 AKGALVLGSSLKQHRTTRRMVVLTSPQVSDSMRKVLETVFDDVIMVDVLDSGDSAHLTLM 75
Query: 217 ERPELGITFTKLHCWRLVQYSKCVFMDADTLVIQNIDDLFEREELSAAPDPGWPDCFNSG 396
+RPELGIT TKLHCW L QYSKCVFMDADTLV+ NIDDLFEREELSAAPDPGWPDCFNSG
Sbjct: 76 KRPELGITLTKLHCWSLTQYSKCVFMDADTLVLSNIDDLFEREELSAAPDPGWPDCFNSG 135
Query: 397 VFVYKPSIDTYVELLQFAIDKGSFDGGDQGLLNMFFSNWSTKDIKHHLPFVYNCVSQAFY 576
VFVY+PSI+TY +LL A ++GSFDGGDQGLLN +FS W+T DI HLPFVYN S + Y
Sbjct: 136 VFVYQPSIETYNQLLHLASEQGSFDGGDQGLLNTYFSGWATTDITKHLPFVYNLSSISIY 195
Query: 577 SYLPAYTHFRADIKVLHFIGPHKPWHHTFDSDTGTV--IFQEGCGQNYESLQLWWTTFIA 750
SYLPA+ F + KV+HF+G KPW++T++ T +V Q+ + E L LWW TF
Sbjct: 196 SYLPAFKAFGKNAKVVHFLGRTKPWNYTYNPQTKSVNCDSQDPTVSHPEFLNLWWDTFTT 255
Query: 751 YTKPLLHDE-----------MGGVCGRMASLDVSSF-VPHEGKFSPKSHQQAWEHGIIDY 894
PLL M V G ++ L + S + ++ WE G DY
Sbjct: 256 NVLPLLQHHGLVKDASSYLMMEHVSGALSDLSFGEAPAAPQPSMSSEERKERWEQGQADY 315
Query: 895 RGLDRFENIKMHL 933
G D F+NIK L
Sbjct: 316 MGADSFDNIKRKL 328
>sp|P46976|GLYG_HUMAN Glycogenin-1
Length = 350
Score = 317 bits (813), Expect = 2e-86
Identities = 166/331 (50%), Positives = 207/331 (62%), Gaps = 32/331 (9%)
Frame = +1
Query: 37 ALGALTLAMSLKHSGTQKELVIMITDNISEAMRNVLSQVFNHIEMVNVLDSNDVINLGLL 216
A GAL L SLK T + LV++ T +S++MR VL VF+ + MV+VLDS D +L L+
Sbjct: 16 AKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLM 75
Query: 217 ERPELGITFTKLHCWRLVQYSKCVFMDADTLVIQNIDDLFEREELSAAPDPGWPDCFNSG 396
+RPELG+T TKLHCW L QYSKCVFMDADTLV+ NIDDLF+REELSAAPDPGWPDCFNSG
Sbjct: 76 KRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSAAPDPGWPDCFNSG 135
Query: 397 VFVYKPSIDTYVELLQFAIDKGSFDGGDQGLLNMFFSNWSTKDIKHHLPFVYNCVSQAFY 576
VFVY+PS++TY +LL A ++GSFDGGDQG+LN FFS+W+T DI+ HLPF+YN S + Y
Sbjct: 136 VFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIY 195
Query: 577 SYLPAYTHFRADIKVLHFIGPHKPWHHTFDSDTGTVIFQEGCGQNY---ESLQLWWTTFI 747
SYLPA+ F A KV+HF+G KPW++T+D T +V E N E L LWW F
Sbjct: 196 SYLPAFKVFGASAKVVHFLGRVKPWNYTYDPKTKSV-KSEAHDPNMTHPEFLILWWNIFT 254
Query: 748 AYTKPLLHD-------------------EMGGVCGRMASLDVSSFVPH----------EG 840
PLL + CG DVS + H +
Sbjct: 255 TNVLPLLQQFGLVKDTCSYVNVLSDLVYTLAFSCGFCRKEDVSGAISHLSLGEIPAMAQP 314
Query: 841 KFSPKSHQQAWEHGIIDYRGLDRFENIKMHL 933
S + ++ WE G DY G D F+NIK L
Sbjct: 315 FVSSEERKERWEQGQADYMGADSFDNIKRKL 345
>sp|P13280|GLYG_RABIT Glycogenin-1
Length = 333
Score = 316 bits (810), Expect = 5e-86
Identities = 159/313 (50%), Positives = 205/313 (65%), Gaps = 14/313 (4%)
Frame = +1
Query: 37 ALGALTLAMSLKHSGTQKELVIMITDNISEAMRNVLSQVFNHIEMVNVLDSNDVINLGLL 216
A GAL L SLK T + L ++ T +S+ MR L VF+ + V++LDS D +L L+
Sbjct: 16 AKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLM 75
Query: 217 ERPELGITFTKLHCWRLVQYSKCVFMDADTLVIQNIDDLFEREELSAAPDPGWPDCFNSG 396
+RPELG+T TKLHCW L QYSKCVFMDADTLV+ NIDDLFEREELSAAPDPGWPDCFNSG
Sbjct: 76 KRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREELSAAPDPGWPDCFNSG 135
Query: 397 VFVYKPSIDTYVELLQFAIDKGSFDGGDQGLLNMFFSNWSTKDIKHHLPFVYNCVSQAFY 576
VFVY+PS++TY +LL A ++GSFDGGDQGLLN FF++W+T DI+ HLPF+YN S + Y
Sbjct: 136 VFVYQPSVETYNQLLHVASEQGSFDGGDQGLLNTFFNSWATTDIRKHLPFIYNLSSISIY 195
Query: 577 SYLPAYTHFRADIKVLHFIGPHKPWHHTFDSDTGTVIFQ--EGCGQNYESLQLWWTTFIA 750
SYLPA+ F A+ KV+HF+G KPW++T+D+ T +V + + + + L +WW F
Sbjct: 196 SYLPAFKAFGANAKVVHFLGQTKPWNYTYDTKTKSVRSEGHDPTMTHPQFLNVWWDIFTT 255
Query: 751 YTKPLLHD--EMGGVCGRMASLDVSSFVPH----------EGKFSPKSHQQAWEHGIIDY 894
PLL + C DVS V H + S + ++ WE G DY
Sbjct: 256 SVVPLLQQFGLVQDTCSYQHVEDVSGAVSHLSLGETPATTQPFVSSEERKERWEQGQADY 315
Query: 895 RGLDRFENIKMHL 933
G D F+NIK L
Sbjct: 316 MGADSFDNIKKKL 328
>sp|O15488|GLYG2_HUMAN Glycogenin-2 (GN-2) (GN2)
Length = 501
Score = 282 bits (721), Expect = 1e-75
Identities = 135/275 (49%), Positives = 179/275 (65%), Gaps = 20/275 (7%)
Frame = +1
Query: 43 GALTLAMSLKHSGTQKELVIMITDNISEAMRNVLSQVFNHIEMVNVLDSNDVINLGLLER 222
GAL L SL+ ++LV++IT +S +R +LS+VF+ + VN++DS D I+L L+R
Sbjct: 51 GALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIEVNLIDSADYIHLAFLKR 110
Query: 223 PELGITFTKLHCWRLVQYSKCVFMDADTLVIQNIDDLFEREELSAAPDPGWPDCFNSGVF 402
PELG+T TKLHCW L YSKCVF+DADTLV+ N+D+LF+R E SAAPDPGWPDCFNSGVF
Sbjct: 111 PELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRGEFSAAPDPGWPDCFNSGVF 170
Query: 403 VYKPSIDTYVELLQFAIDKGSFDGGDQGLLNMFFSNWSTKDIKHHLPFVYNCVSQAFYSY 582
V++PS+ T+ LLQ A++ GSFDG DQGLLN FF NWST DI HLPF+YN S Y+Y
Sbjct: 171 VFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNLSSNTMYTY 230
Query: 583 LPAYTHFRADIKVLHFIGPHKPWHHTFDSDTGTVIFQEGCGQNYES---LQLWWTTFIAY 753
PA+ F + KV+HF+G KPW++ ++ +G+V+ Q + L LWWT +
Sbjct: 231 SPAFKQFGSSAKVVHFLGSMKPWNYKYNPQSGSVLEQGSVSSSQHQAAFLHLWWTVYQNN 290
Query: 754 TKP-----------------LLHDEMGGVCGRMAS 807
P L H ++GG C AS
Sbjct: 291 VLPLYKSVQAGEARASPGHTLCHSDVGGPCADSAS 325
Score = 31.2 bits (69), Expect = 4.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 841 KFSPKSHQQAWEHGIIDYRGLDRFENIKMHL 933
+ SP+ ++ WE G IDY G D F I+ L
Sbjct: 466 ELSPEEERRKWEEGRIDYMGKDAFARIQEKL 496
>sp|P47011|GLG2_YEAST Glycogen synthesis initiator protein GLG2
Length = 380
Score = 123 bits (309), Expect = 6e-28
Identities = 88/259 (33%), Positives = 124/259 (47%), Gaps = 40/259 (15%)
Frame = +1
Query: 16 LLQMMNIALGALTLAMSL----KHSGTQKELVIMIT-------DNISEAMRNVLSQVFNH 162
LL + GALTLA L KH+ + E+ + + D ++ +F
Sbjct: 10 LLYSRDYLPGALTLAYQLQKLLKHAVVEDEITLCLLIEKKLFGDEFKPQEIALIRSLFKE 69
Query: 163 IEMVNVLDSNDV------INLGLLERPELGITFTKLHCWRLVQYSKCVFMDADTLVIQNI 324
I ++ L + NL LL+RPEL T K W LVQ+ + +F+DADTL +
Sbjct: 70 IIIIEPLKDQEKSIEKNKANLELLKRPELSHTLLKARLWELVQFDQVLFLDADTLPLNK- 128
Query: 325 DDLFE---------REELSAAPDPGWPDCFNSGVFVYKPSIDTYVELLQFAIDKGSFDGG 477
+ FE R +++A PD GWPD FN+GV + P +D L F I S DG
Sbjct: 129 -EFFEILRLYPEQTRFQIAAVPDIGWPDMFNTGVLLLIPDLDMATSLQDFLIKTVSIDGA 187
Query: 478 DQGLLNMFFS---NWSTKDIKH---------HLPFVYNCVSQAF-YSYLPAYTHFRADIK 618
DQG+ N FF+ N+S K++ H LPF YN + Y PA F+ I+
Sbjct: 188 DQGIFNQFFNPICNYS-KEVLHKVSPLMEWIRLPFTYNVTMPNYGYQSSPAMNFFQQHIR 246
Query: 619 VLHFIGPHKPW-HHTFDSD 672
++HFIG KPW +T D D
Sbjct: 247 LIHFIGTFKPWSRNTTDYD 265
>sp|P36143|GLG1_YEAST Glycogen synthesis initiator protein GLG1
Length = 480
Score = 83.6 bits (205), Expect = 7e-16
Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Frame = +1
Query: 346 ELSAAPDPGWPDCFNSGVFVYKPSIDTYVELLQFAIDKGSFDGGDQGLLNMFFS-NWSTK 522
++ A D GWPD FNSGV + P DT L + + S DG DQG+LN FF+ N T
Sbjct: 8 QVGAIADIGWPDMFNSGVMMLIPDADTASVLQNYIFENTSIDGSDQGILNQFFNQNCCTD 67
Query: 523 DIKH--------HLPFVYN-CVSQAFYSYLPAYTHFRADIKVLHFIGPHKPW 651
++ L F YN + Y PA +F+ IK++HFIG HKPW
Sbjct: 68 ELVKDSFSREWVQLSFTYNVTIPNLGYQSSPAMNYFKPSIKLIHFIGKHKPW 119
>sp|Q9Y761|GNT1A_KLULA Glucose N-acetyltransferase 1-A (N-acetylglucosaminyltransferase A)
Length = 460
Score = 42.0 bits (97), Expect = 0.002
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Frame = +1
Query: 67 LKHSGTQKELVIMITDNISEAMRNVLSQVFNHIEMVNVLDSNDVI----NLGLLERPELG 234
L SGTQ +LV+++ ++E + V + + N ++ N+ L +
Sbjct: 118 LHESGTQAKLVMLVAKELTELPED--DSVTRMLAQFKEISDNCIVKPVENIVLSQGSAQW 175
Query: 235 IT-FTKLHCWRLVQYSKCVFMDADTLVIQNIDDLF 336
+T TKL + +V+Y + V+ D+D+++ +N+D+LF
Sbjct: 176 MTSMTKLRVFGMVEYKRIVYFDSDSIITRNMDELF 210
>sp|Q6CT96|GNT1B_KLULA Glucose N-acetyltransferase 1-B (N-acetylglucosaminyltransferase B)
Length = 453
Score = 37.0 bits (84), Expect = 0.080
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Frame = +1
Query: 67 LKHSGTQKELVIMITDNIS---------EAMRNVLSQVFNHI---EMVNVLDSNDVINLG 210
L SG++ +L+ ++TD + EA+ N + V + + E+ +V+ ND
Sbjct: 107 LNDSGSKAKLLALVTDTLVNKSKENKEVEALLNKIKSVSDRVAVTEVGSVIQPND----- 161
Query: 211 LLERPELGITFTKLHCWRLVQYSKCVFMDADTLVIQNIDDLF 336
+ TKL + L Y + ++MD D ++ +D+LF
Sbjct: 162 ---HTPWSKSLTKLAIFNLTDYERIIYMDNDAIIHDKMDELF 200
>sp|Q09680|YA0C_SCHPO Hypothetical protein C5H10.12c in chromosome I
Length = 371
Score = 35.8 bits (81), Expect = 0.18
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = +1
Query: 241 FTKLHCWRLVQYSKCVFMDADTLVIQNIDDLFE 339
F+KL + +Q+ K +D+D L+++NIDD+F+
Sbjct: 161 FSKLRIFEQIQFDKICVIDSDILIMKNIDDIFD 193
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,908,281
Number of Sequences: 369166
Number of extensions: 2441706
Number of successful extensions: 5869
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5857
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9606826000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)