Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_005_B23
(571 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 273 2e-73
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 273 2e-73
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 273 2e-73
sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A 273 2e-73
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 273 2e-73
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 272 5e-73
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 271 6e-73
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 271 1e-72
sp|P11503|HSP70_ONCVO Heat shock 70 kDa protein (HSP70) 270 2e-72
sp|P08418|HSP70_SCHMA Heat shock 70 kDa homolog protein (HS... 269 4e-72
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 273 bits (698), Expect = 2e-73
Identities = 145/188 (77%), Positives = 147/188 (78%)
Frame = +1
Query: 7 VLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXX 186
VLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394
Query: 187 XXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNN 366
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNN
Sbjct: 395 DVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNN 454
Query: 367 LLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDD 546
LLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+D
Sbjct: 455 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKED 514
Query: 547 IERMVAEA 570
IERMV EA
Sbjct: 515 IERMVQEA 522
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 273 bits (698), Expect = 2e-73
Identities = 145/188 (77%), Positives = 147/188 (78%)
Frame = +1
Query: 7 VLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXX 186
VLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394
Query: 187 XXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNN 366
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNN
Sbjct: 395 DVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNN 454
Query: 367 LLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDD 546
LLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+D
Sbjct: 455 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKED 514
Query: 547 IERMVAEA 570
IERMV EA
Sbjct: 515 IERMVQEA 522
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 273 bits (698), Expect = 2e-73
Identities = 145/188 (77%), Positives = 147/188 (78%)
Frame = +1
Query: 7 VLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXX 186
VLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394
Query: 187 XXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNN 366
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNN
Sbjct: 395 DVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNN 454
Query: 367 LLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDD 546
LLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+D
Sbjct: 455 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKED 514
Query: 547 IERMVAEA 570
IERMV EA
Sbjct: 515 IERMVQEA 522
>sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A
Length = 640
Score = 273 bits (698), Expect = 2e-73
Identities = 144/188 (76%), Positives = 149/188 (79%)
Frame = +1
Query: 7 VLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXX 186
VLVGGSTRIPK+QKLL DLF+GKELNKSINPDE ILSGDKSEAVQD
Sbjct: 336 VLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLL 395
Query: 187 XXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNN 366
GIETAGGVMTALIKRN YSDNQPGVLIQVYEGERAMTKDNN
Sbjct: 396 DVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNN 455
Query: 367 LLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDD 546
LLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGK+NKITITNDKGRLSKDD
Sbjct: 456 LLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITITNDKGRLSKDD 515
Query: 547 IERMVAEA 570
IERMV EA
Sbjct: 516 IERMVNEA 523
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 273 bits (698), Expect = 2e-73
Identities = 145/188 (77%), Positives = 147/188 (78%)
Frame = +1
Query: 7 VLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXX 186
VLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394
Query: 187 XXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNN 366
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNN
Sbjct: 395 DVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNN 454
Query: 367 LLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDD 546
LLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+D
Sbjct: 455 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKED 514
Query: 547 IERMVAEA 570
IERMV EA
Sbjct: 515 IERMVQEA 522
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 272 bits (695), Expect = 5e-73
Identities = 144/188 (76%), Positives = 147/188 (78%)
Frame = +1
Query: 7 VLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXX 186
VLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 335 VLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394
Query: 187 XXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNN 366
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNN
Sbjct: 395 DVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNN 454
Query: 367 LLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDD 546
LLGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVSAV+K TGKENKITITNDKGRLSK+D
Sbjct: 455 LLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGRLSKED 514
Query: 547 IERMVAEA 570
IERMV EA
Sbjct: 515 IERMVQEA 522
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 271 bits (694), Expect = 6e-73
Identities = 142/188 (75%), Positives = 149/188 (79%)
Frame = +1
Query: 7 VLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXX 186
VLVGGSTRIPK+QKLLQD FNG+ELNKSINPDE ILSGDKSE VQD
Sbjct: 337 VLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAIQAAILSGDKSENVQDLLLL 396
Query: 187 XXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNN 366
GIETAGGVMTALIKRN YSDNQPGV+IQVYEGERAMTKDNN
Sbjct: 397 DVAPLSLGIETAGGVMTALIKRNTTIPSKQTQTFTTYSDNQPGVMIQVYEGERAMTKDNN 456
Query: 367 LLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDD 546
LLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+D
Sbjct: 457 LLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKED 516
Query: 547 IERMVAEA 570
IERMV +A
Sbjct: 517 IERMVQDA 524
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 271 bits (692), Expect = 1e-72
Identities = 143/188 (76%), Positives = 146/188 (77%)
Frame = +1
Query: 7 VLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXX 186
VLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394
Query: 187 XXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNN 366
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNN
Sbjct: 395 DVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNN 454
Query: 367 LLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDD 546
LLGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVSA +K TGKENKITITNDKGRLSK+D
Sbjct: 455 LLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAADKSTGKENKITITNDKGRLSKED 514
Query: 547 IERMVAEA 570
IERMV EA
Sbjct: 515 IERMVQEA 522
>sp|P11503|HSP70_ONCVO Heat shock 70 kDa protein (HSP70)
Length = 322
Score = 270 bits (689), Expect = 2e-72
Identities = 142/188 (75%), Positives = 148/188 (78%)
Frame = +1
Query: 7 VLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXX 186
VLVGGSTRIPK+QKLL D F+GKELNKSINPDE ILSGDKSEAVQD
Sbjct: 92 VLVGGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLL 151
Query: 187 XXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNN 366
GIETAGGVMTALIKRN YSDNQPGVLIQVYEGERAMTKDNN
Sbjct: 152 DVAPLSLGIETAGGVMTALIKRNTTIPTKTSQTFTTYSDNQPGVLIQVYEGERAMTKDNN 211
Query: 367 LLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDD 546
LLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGK+NKITITNDKGRLSKD+
Sbjct: 212 LLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQNKITITNDKGRLSKDE 271
Query: 547 IERMVAEA 570
IERMV EA
Sbjct: 272 IERMVQEA 279
>sp|P08418|HSP70_SCHMA Heat shock 70 kDa homolog protein (HSP70) (Major surface antigen)
Length = 637
Score = 269 bits (687), Expect = 4e-72
Identities = 139/188 (73%), Positives = 150/188 (79%)
Frame = +1
Query: 7 VLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXX 186
VLVGGSTRIPK+QKLLQD FNGKELNKSINPDE ILSG+K EAVQD
Sbjct: 333 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGEKCEAVQDLLLL 392
Query: 187 XXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNN 366
G+ETAGGVMTALIKRN YSDNQPGVLIQV+EGERA+TKDNN
Sbjct: 393 DVAPLSLGLETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFEGERALTKDNN 452
Query: 367 LLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDD 546
LLGKFEL+GIPPAPRG PQIEVTFDIDANGILNVSAV+KGTGK+NKITITNDKGRLSK++
Sbjct: 453 LLGKFELSGIPPAPRGTPQIEVTFDIDANGILNVSAVDKGTGKQNKITITNDKGRLSKEE 512
Query: 547 IERMVAEA 570
IERMVA+A
Sbjct: 513 IERMVADA 520
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.312 0.135 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,636,988
Number of Sequences: 369166
Number of extensions: 887325
Number of successful extensions: 2905
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2335
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 4177115900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)