Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_005_A23
(967 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 535 e-152
sp|P17126|ACT_HYDAT Actin, non-muscle 6.2 534 e-151
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 534 e-151
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 533 e-151
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 532 e-151
sp|P41113|ACT3_PODCA Actin-3 532 e-151
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 531 e-150
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 531 e-150
sp|P12716|ACTC_PISOC Actin, cytoplasmic 530 e-150
sp|P53458|ACT5_DIPDE Actin-5 528 e-150
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 535 bits (1379), Expect = e-152
Identities = 264/292 (90%), Positives = 271/292 (92%)
Frame = +2
Query: 2 KIWHHTFYYELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAIQAVLSLY 181
KIWHHTFY ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 182 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTERGYSFTTT 361
ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 362 AEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFRCPETLFQ 541
AEREIVRDIKEKL YVAL F++EMHTA PDGQVITIGNERFRCPE +FQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMHTAATSSSLEKSYELPDGQVITIGNERFRCPEAVFQ 264
Query: 542 PSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISDRMQKEITSLAPP 721
PSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMFPGI+DRMQKEIT+LAPP
Sbjct: 265 PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPP 324
Query: 722 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 877
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|P17126|ACT_HYDAT Actin, non-muscle 6.2
Length = 376
Score = 534 bits (1375), Expect = e-151
Identities = 264/292 (90%), Positives = 272/292 (93%)
Frame = +2
Query: 2 KIWHHTFYYELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAIQAVLSLY 181
KIWHHTFY ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 144
Query: 182 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTERGYSFTTT 361
ASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 362 AEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFRCPETLFQ 541
AEREIVRDIKEKLSYVAL F++EM TA PDGQVITIGNERFRCPETLFQ
Sbjct: 205 AEREIVRDIKEKLSYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPETLFQ 264
Query: 542 PSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISDRMQKEITSLAPP 721
PSFIG+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMFPGI+DRMQKEI++LAPP
Sbjct: 265 PSFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEISALAPP 324
Query: 722 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 877
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 534 bits (1375), Expect = e-151
Identities = 264/292 (90%), Positives = 270/292 (92%)
Frame = +2
Query: 2 KIWHHTFYYELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAIQAVLSLY 181
KIWHHTFY ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 182 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTERGYSFTTT 361
ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 362 AEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFRCPETLFQ 541
AEREIVRDIKEKL YVAL F++EM TA PDGQVITIGNERFRCPE LFQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDGQVITIGNERFRCPEALFQ 264
Query: 542 PSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISDRMQKEITSLAPP 721
PSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMFPGI+DRMQKEIT+LAPP
Sbjct: 265 PSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPP 324
Query: 722 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 877
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 533 bits (1373), Expect = e-151
Identities = 263/292 (90%), Positives = 270/292 (92%)
Frame = +2
Query: 2 KIWHHTFYYELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAIQAVLSLY 181
KIWHHTFY ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 182 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTERGYSFTTT 361
ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 362 AEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFRCPETLFQ 541
AEREIVRDIKEKL YVAL F++EM TA PDGQVITIGNERFRCPE +FQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQ 264
Query: 542 PSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISDRMQKEITSLAPP 721
PSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMFPGI+DRMQKEIT+LAPP
Sbjct: 265 PSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPP 324
Query: 722 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 877
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 532 bits (1371), Expect = e-151
Identities = 262/292 (89%), Positives = 270/292 (92%)
Frame = +2
Query: 2 KIWHHTFYYELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAIQAVLSLY 181
KIWHHTFY ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 182 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTERGYSFTTT 361
ASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 362 AEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFRCPETLFQ 541
AEREIVRDIKEKL YVAL F++EM TA PDGQVITIGNERFRCPE +FQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQ 264
Query: 542 PSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISDRMQKEITSLAPP 721
PSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMFPGI+DRMQKEIT+LAPP
Sbjct: 265 PSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPP 324
Query: 722 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 877
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|P41113|ACT3_PODCA Actin-3
Length = 376
Score = 532 bits (1370), Expect = e-151
Identities = 262/292 (89%), Positives = 272/292 (93%)
Frame = +2
Query: 2 KIWHHTFYYELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAIQAVLSLY 181
KIWHHTFY ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 144
Query: 182 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTERGYSFTTT 361
ASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYMMKILTERGYSFTTT 204
Query: 362 AEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFRCPETLFQ 541
AEREIVRDIKEKL+YVAL F++EM TA PDGQVITIGNERFRCPETLFQ
Sbjct: 205 AEREIVRDIKEKLAYVALDFEQEMQTAVTSSSLEKSYELPDGQVITIGNERFRCPETLFQ 264
Query: 542 PSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISDRMQKEITSLAPP 721
P+FIG+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMFPGI+DRMQKEI+SLAPP
Sbjct: 265 PAFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEISSLAPP 324
Query: 722 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 877
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 531 bits (1368), Expect = e-150
Identities = 262/292 (89%), Positives = 269/292 (92%)
Frame = +2
Query: 2 KIWHHTFYYELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAIQAVLSLY 181
KIWHHTFY ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 182 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTERGYSFTTT 361
ASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 362 AEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFRCPETLFQ 541
AEREIVRDIKEKL YVAL F++EM TA PDGQVITIGNERFRCPE FQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEATFQ 264
Query: 542 PSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISDRMQKEITSLAPP 721
PSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMFPGI+DRMQKEIT+LAPP
Sbjct: 265 PSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPP 324
Query: 722 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 877
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 531 bits (1367), Expect = e-150
Identities = 261/292 (89%), Positives = 270/292 (92%)
Frame = +2
Query: 2 KIWHHTFYYELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAIQAVLSLY 181
KIWHHTFY ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 182 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTERGYSFTTT 361
ASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 362 AEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFRCPETLFQ 541
AEREIVRDIKEKL YVAL F++EM TA PDGQVITIGNERFRCPE ++Q
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMYQ 264
Query: 542 PSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISDRMQKEITSLAPP 721
PSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMFPGI+DRMQKEIT+LAPP
Sbjct: 265 PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPP 324
Query: 722 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 877
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 530 bits (1365), Expect = e-150
Identities = 261/292 (89%), Positives = 269/292 (92%)
Frame = +2
Query: 2 KIWHHTFYYELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAIQAVLSLY 181
KIWHHTFY ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 182 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTERGYSFTTT 361
ASGRTTGIV DSGDGV+HTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 362 AEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFRCPETLFQ 541
AEREIVRDIKEKL YVAL F++EM TA PDGQVITIGNERFRCPE LFQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQ 264
Query: 542 PSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISDRMQKEITSLAPP 721
PSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMFPGI+DRMQKE+T+LAPP
Sbjct: 265 PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEVTALAPP 324
Query: 722 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 877
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|P53458|ACT5_DIPDE Actin-5
Length = 371
Score = 528 bits (1361), Expect = e-150
Identities = 261/292 (89%), Positives = 269/292 (92%)
Frame = +2
Query: 2 KIWHHTFYYELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAIQAVLSLY 181
KIWHHTFY ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 80 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 139
Query: 182 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTERGYSFTTT 361
ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 140 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 199
Query: 362 AEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFRCPETLFQ 541
AEREIVRDIKEKL YVAL F++EM A PDGQVITIGNERFRCPE LFQ
Sbjct: 200 AEREIVRDIKEKLCYVALDFEQEMSNAASSSALEKSYELPDGQVITIGNERFRCPEALFQ 259
Query: 542 PSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISDRMQKEITSLAPP 721
PSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGISDRMQKEI++LAP
Sbjct: 260 PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGISDRMQKEISALAPS 319
Query: 722 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 877
TMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 320 TMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 371
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,881,383
Number of Sequences: 369166
Number of extensions: 2152294
Number of successful extensions: 5571
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5410
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10048372950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)