Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_004_P03
(818 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P49891|ST1E1_MOUSE Estrogen sulfotransferase, testis iso... 49 2e-05
sp|Q6PH37|ST1S1_BRARE Cytosolic sulfotransferase 1 (SULT1 ST1) 48 3e-05
sp|O46503|ST1C1_RABIT Sulfotransferase 1C1 (rabSULT1C2) 47 5e-05
sp|O43704|ST1B1_HUMAN Sulfotransferase family cytosolic 1B ... 47 6e-05
sp|P49889|ST1E3_RAT Estrogen sulfotransferase, isoform 3 (E... 47 6e-05
sp|P52845|ST1E2_RAT Estrogen sulfotransferase, isoform 2 (E... 47 6e-05
sp|Q7ZUS4|ST2S2_BRARE Cytosolic sulfotransferase 2 (SULT1 ST2) 47 8e-05
sp|Q7T2V2|ST1S3_BRARE Cytosolic sulfotransferase 3 (SULT1 ST3) 47 8e-05
sp|P17988|ST1A1_RAT Sulfotransferase 1A1 (Aryl sulfotransfe... 46 1e-04
sp|Q9D939|ST1C1_MOUSE Sulfotransferase 1C1 46 1e-04
>sp|P49891|ST1E1_MOUSE Estrogen sulfotransferase, testis isoform (Sulfotransferase,
estrogen-preferring)
Length = 295
Score = 48.5 bits (114), Expect = 2e-05
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +1
Query: 7 FIRKGEVGDWKNYFTEEQSKRLDEKYNPILEKCGLKFRYE 126
F+RKG +GDWKN+F E +R DE Y ++ C +KFR E
Sbjct: 255 FMRKGIIGDWKNHFPEALRERFDEHYKQQMKDCTVKFRME 294
>sp|Q6PH37|ST1S1_BRARE Cytosolic sulfotransferase 1 (SULT1 ST1)
Length = 299
Score = 48.1 bits (113), Expect = 3e-05
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +1
Query: 7 FIRKGEVGDWKNYFTEEQSKRLDEKYNPILEKCGLKFRYE 126
F+RKG+VGDWKN+FT Q+++ DE Y ++ +KFR E
Sbjct: 259 FMRKGKVGDWKNHFTVAQNEQFDEVYKEKMKNATVKFRTE 298
>sp|O46503|ST1C1_RABIT Sulfotransferase 1C1 (rabSULT1C2)
Length = 296
Score = 47.4 bits (111), Expect = 5e-05
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +1
Query: 7 FIRKGEVGDWKNYFTEEQSKRLDEKYNPILEKCGLKFRYE 126
F+RKG VGDWKN+FT QS RLDE Y +E + F E
Sbjct: 256 FMRKGTVGDWKNHFTVAQSHRLDELYRKKMEGVSIDFCLE 295
>sp|O43704|ST1B1_HUMAN Sulfotransferase family cytosolic 1B member 1 (Sulfotransferase
1B2) (Thyroid hormone sulfotransferase)
Length = 296
Score = 47.0 bits (110), Expect = 6e-05
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +1
Query: 7 FIRKGEVGDWKNYFTEEQSKRLDEKYNPILEKCGLKFRYE 126
F+RKG GDWKNYFT Q+++ D Y + K L+FR E
Sbjct: 256 FMRKGTAGDWKNYFTVAQNEKFDAIYETEMSKTALQFRTE 295
>sp|P49889|ST1E3_RAT Estrogen sulfotransferase, isoform 3 (EST-3) (Sulfotransferase,
estrogen-preferring) (Estrone sulfotransferase)
Length = 295
Score = 47.0 bits (110), Expect = 6e-05
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +1
Query: 7 FIRKGEVGDWKNYFTEEQSKRLDEKYNPILEKCGLKFRYE 126
F+RKG VGDWKN+F E +R +E Y ++ C +KFR E
Sbjct: 255 FMRKGIVGDWKNHFPEALRERFEEHYQQQMKDCPVKFRAE 294
>sp|P52845|ST1E2_RAT Estrogen sulfotransferase, isoform 2 (EST-2) (Sulfotransferase,
estrogen-preferring) (Estrone sulfotransferase)
Length = 295
Score = 47.0 bits (110), Expect = 6e-05
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +1
Query: 7 FIRKGEVGDWKNYFTEEQSKRLDEKYNPILEKCGLKFRYE 126
F+RKG VGDWKN+F E +R +E Y ++ C +KFR E
Sbjct: 255 FMRKGIVGDWKNHFPEALRERFEEHYQQQMKDCPVKFRAE 294
>sp|Q7ZUS4|ST2S2_BRARE Cytosolic sulfotransferase 2 (SULT1 ST2)
Length = 301
Score = 46.6 bits (109), Expect = 8e-05
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = +1
Query: 7 FIRKGEVGDWKNYFTEEQSKRLDEKYNPILEKCGLKFRYE 126
F+RKG+VGDW+N+FT Q+++ DE Y ++ +KFR E
Sbjct: 261 FMRKGKVGDWRNHFTVAQNEQFDEVYKQKMKNTTVKFRTE 300
>sp|Q7T2V2|ST1S3_BRARE Cytosolic sulfotransferase 3 (SULT1 ST3)
Length = 301
Score = 46.6 bits (109), Expect = 8e-05
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = +1
Query: 7 FIRKGEVGDWKNYFTEEQSKRLDEKYNPILEKCGLKFRYE 126
F+RKG+VGDW+N+FT Q+++ DE Y ++ +KFR E
Sbjct: 261 FMRKGKVGDWRNHFTVAQNEQFDEVYKQKMKNTTVKFRTE 300
>sp|P17988|ST1A1_RAT Sulfotransferase 1A1 (Aryl sulfotransferase) (Phenol
sulfotransferase) (PST-1) (Sulfokinase) (Aryl
sulfotransferase IV) (ASTIV) (Tyrosine-ester
sulfotransferase) (Minoxidil sulfotransferase)
Length = 291
Score = 46.2 bits (108), Expect = 1e-04
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +1
Query: 7 FIRKGEVGDWKNYFTEEQSKRLDEKYNPILEKCGLKFRYE 126
F+RKG GDWKN FT Q++R D Y + C KFR E
Sbjct: 251 FMRKGTTGDWKNTFTVAQNERFDAHYAKTMTDCDFKFRCE 290
>sp|Q9D939|ST1C1_MOUSE Sulfotransferase 1C1
Length = 296
Score = 45.8 bits (107), Expect = 1e-04
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +1
Query: 7 FIRKGEVGDWKNYFTEEQSKRLDEKYNPILEKCGLKFRYE 126
F+RKG VGDWKN+FT Q++R DE Y + + L F E
Sbjct: 256 FMRKGTVGDWKNHFTVAQNERFDEIYKQKMGRTSLNFSME 295
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,390,756
Number of Sequences: 369166
Number of extensions: 1432247
Number of successful extensions: 3228
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3227
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7859674995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)