Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_004_O05
(882 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O08730|GLYG_RAT Glycogenin-1 321 2e-87
sp|Q9R062|GLYG_MOUSE Glycogenin-1 320 4e-87
sp|P46976|GLYG_HUMAN Glycogenin-1 319 7e-87
sp|P13280|GLYG_RABIT Glycogenin-1 316 6e-86
sp|O15488|GLYG2_HUMAN Glycogenin-2 (GN-2) (GN2) 299 6e-81
sp|P47011|GLG2_YEAST Glycogen synthesis initiator protein GLG2 127 3e-29
sp|P36143|GLG1_YEAST Glycogen synthesis initiator protein GLG1 84 7e-16
sp|Q9Y761|GNT1A_KLULA Glucose N-acetyltransferase 1-A (N-ac... 47 5e-05
sp|Q6CT96|GNT1B_KLULA Glucose N-acetyltransferase 1-B (N-ac... 46 1e-04
sp|Q59ZI3|GNT1_CANAL Glucose N-acetyltransferase 1 (N-acety... 42 0.002
>sp|O08730|GLYG_RAT Glycogenin-1
Length = 333
Score = 321 bits (822), Expect = 2e-87
Identities = 163/306 (53%), Positives = 204/306 (66%), Gaps = 14/306 (4%)
Frame = +3
Query: 3 EAYVTLATNDEYALGALTLAMSLKHSGTQKELVIMITDNISEAMRNVLSQVFNHIEMVNV 182
+A+VTL TND YA GAL L SLK T + V++ + +S++MR VL VF+ + MV+V
Sbjct: 4 QAFVTLTTNDAYAKGALVLGSSLKQHRTTRRTVVLASPQVSDSMRKVLETVFDEVIMVDV 63
Query: 183 LDSNDVINLGLLERPELGITFTKLHCWRLVQYSKCVFMDADTLVIQNIDDLFEREELSAA 362
LDS D +L L++RPELGIT TKLHCW L QYSKCVFMDADTLV+ NIDDLFEREELSAA
Sbjct: 64 LDSGDSAHLTLMKRPELGITLTKLHCWSLTQYSKCVFMDADTLVLSNIDDLFEREELSAA 123
Query: 363 PDPGWPDCFNSGVFVYKPSIDTYVELLQFAIDKGSFDGGDQGLLNMFFSNWSTKDIKHHL 542
PDPGWPDCFNSGVFVY+PSI+TY +LL A ++GSFDGGDQGLLN +FS W+T DI HL
Sbjct: 124 PDPGWPDCFNSGVFVYQPSIETYNQLLHLASEQGSFDGGDQGLLNTYFSGWATTDITKHL 183
Query: 543 PFVYNCVSQAFYSYLPAYTHFRADIKVLHFIGPHKPWHHTFDSDTGTV--IFQEGCGQNY 716
PFVYN S + YSYLPA+ F + KV+HF+G KPW++T++ T +V Q+ +
Sbjct: 184 PFVYNLSSLSIYSYLPAFKAFGKNAKVVHFLGRTKPWNYTYNPQTKSVKCESQDPIVSHP 243
Query: 717 ESLQLWWTTFIAYTKPLLHDE-----------MGGVCGRMASLDVSSFVP-HEGKFSPKS 860
E L LWW TF PLL M V G ++ L P + S +
Sbjct: 244 EFLNLWWDTFTTNVLPLLQHHGLVKDAGSYLMMEHVTGALSDLSFGEAPPASQPSLSSEE 303
Query: 861 HQQAWE 878
++ WE
Sbjct: 304 RKERWE 309
>sp|Q9R062|GLYG_MOUSE Glycogenin-1
Length = 333
Score = 320 bits (819), Expect = 4e-87
Identities = 155/258 (60%), Positives = 191/258 (74%), Gaps = 2/258 (0%)
Frame = +3
Query: 3 EAYVTLATNDEYALGALTLAMSLKHSGTQKELVIMITDNISEAMRNVLSQVFNHIEMVNV 182
+A+VTL TND YA GAL L SLK T + +V++ + +S++MR VL VF+ + MV+V
Sbjct: 4 QAFVTLTTNDAYAKGALVLGSSLKQHRTTRRMVVLTSPQVSDSMRKVLETVFDDVIMVDV 63
Query: 183 LDSNDVINLGLLERPELGITFTKLHCWRLVQYSKCVFMDADTLVIQNIDDLFEREELSAA 362
LDS D +L L++RPELGIT TKLHCW L QYSKCVFMDADTLV+ NIDDLFEREELSAA
Sbjct: 64 LDSGDSAHLTLMKRPELGITLTKLHCWSLTQYSKCVFMDADTLVLSNIDDLFEREELSAA 123
Query: 363 PDPGWPDCFNSGVFVYKPSIDTYVELLQFAIDKGSFDGGDQGLLNMFFSNWSTKDIKHHL 542
PDPGWPDCFNSGVFVY+PSI+TY +LL A ++GSFDGGDQGLLN +FS W+T DI HL
Sbjct: 124 PDPGWPDCFNSGVFVYQPSIETYNQLLHLASEQGSFDGGDQGLLNTYFSGWATTDITKHL 183
Query: 543 PFVYNCVSQAFYSYLPAYTHFRADIKVLHFIGPHKPWHHTFDSDTGTV--IFQEGCGQNY 716
PFVYN S + YSYLPA+ F + KV+HF+G KPW++T++ T +V Q+ +
Sbjct: 184 PFVYNLSSISIYSYLPAFKAFGKNAKVVHFLGRTKPWNYTYNPQTKSVNCDSQDPTVSHP 243
Query: 717 ESLQLWWTTFIAYTKPLL 770
E L LWW TF PLL
Sbjct: 244 EFLNLWWDTFTTNVLPLL 261
>sp|P46976|GLYG_HUMAN Glycogenin-1
Length = 350
Score = 319 bits (817), Expect = 7e-87
Identities = 155/259 (59%), Positives = 191/259 (73%), Gaps = 3/259 (1%)
Frame = +3
Query: 3 EAYVTLATNDEYALGALTLAMSLKHSGTQKELVIMITDNISEAMRNVLSQVFNHIEMVNV 182
+A+VTL TND YA GAL L SLK T + LV++ T +S++MR VL VF+ + MV+V
Sbjct: 4 QAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVDV 63
Query: 183 LDSNDVINLGLLERPELGITFTKLHCWRLVQYSKCVFMDADTLVIQNIDDLFEREELSAA 362
LDS D +L L++RPELG+T TKLHCW L QYSKCVFMDADTLV+ NIDDLF+REELSAA
Sbjct: 64 LDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSAA 123
Query: 363 PDPGWPDCFNSGVFVYKPSIDTYVELLQFAIDKGSFDGGDQGLLNMFFSNWSTKDIKHHL 542
PDPGWPDCFNSGVFVY+PS++TY +LL A ++GSFDGGDQG+LN FFS+W+T DI+ HL
Sbjct: 124 PDPGWPDCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIRKHL 183
Query: 543 PFVYNCVSQAFYSYLPAYTHFRADIKVLHFIGPHKPWHHTFDSDTGTVIFQEGCGQNY-- 716
PF+YN S + YSYLPA+ F A KV+HF+G KPW++T+D T +V E N
Sbjct: 184 PFIYNLSSISIYSYLPAFKVFGASAKVVHFLGRVKPWNYTYDPKTKSV-KSEAHDPNMTH 242
Query: 717 -ESLQLWWTTFIAYTKPLL 770
E L LWW F PLL
Sbjct: 243 PEFLILWWNIFTTNVLPLL 261
>sp|P13280|GLYG_RABIT Glycogenin-1
Length = 333
Score = 316 bits (809), Expect = 6e-86
Identities = 154/282 (54%), Positives = 197/282 (69%), Gaps = 4/282 (1%)
Frame = +3
Query: 3 EAYVTLATNDEYALGALTLAMSLKHSGTQKELVIMITDNISEAMRNVLSQVFNHIEMVNV 182
+A+VTL TND YA GAL L SLK T + L ++ T +S+ MR L VF+ + V++
Sbjct: 4 QAFVTLTTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIVFDEVITVDI 63
Query: 183 LDSNDVINLGLLERPELGITFTKLHCWRLVQYSKCVFMDADTLVIQNIDDLFEREELSAA 362
LDS D +L L++RPELG+T TKLHCW L QYSKCVFMDADTLV+ NIDDLFEREELSAA
Sbjct: 64 LDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREELSAA 123
Query: 363 PDPGWPDCFNSGVFVYKPSIDTYVELLQFAIDKGSFDGGDQGLLNMFFSNWSTKDIKHHL 542
PDPGWPDCFNSGVFVY+PS++TY +LL A ++GSFDGGDQGLLN FF++W+T DI+ HL
Sbjct: 124 PDPGWPDCFNSGVFVYQPSVETYNQLLHVASEQGSFDGGDQGLLNTFFNSWATTDIRKHL 183
Query: 543 PFVYNCVSQAFYSYLPAYTHFRADIKVLHFIGPHKPWHHTFDSDTGTVIFQ--EGCGQNY 716
PF+YN S + YSYLPA+ F A+ KV+HF+G KPW++T+D+ T +V + + +
Sbjct: 184 PFIYNLSSISIYSYLPAFKAFGANAKVVHFLGQTKPWNYTYDTKTKSVRSEGHDPTMTHP 243
Query: 717 ESLQLWWTTFIAYTKPLLHD--EMGGVCGRMASLDVSSFVPH 836
+ L +WW F PLL + C DVS V H
Sbjct: 244 QFLNVWWDIFTTSVVPLLQQFGLVQDTCSYQHVEDVSGAVSH 285
>sp|O15488|GLYG2_HUMAN Glycogenin-2 (GN-2) (GN2)
Length = 501
Score = 299 bits (766), Expect = 6e-81
Identities = 144/289 (49%), Positives = 190/289 (65%), Gaps = 20/289 (6%)
Frame = +3
Query: 3 EAYVTLATNDEYALGALTLAMSLKHSGTQKELVIMITDNISEAMRNVLSQVFNHIEMVNV 182
+A+VTLATND Y GAL L SL+ ++LV++IT +S +R +LS+VF+ + VN+
Sbjct: 37 QAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIEVNL 96
Query: 183 LDSNDVINLGLLERPELGITFTKLHCWRLVQYSKCVFMDADTLVIQNIDDLFEREELSAA 362
+DS D I+L L+RPELG+T TKLHCW L YSKCVF+DADTLV+ N+D+LF+R E SAA
Sbjct: 97 IDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRGEFSAA 156
Query: 363 PDPGWPDCFNSGVFVYKPSIDTYVELLQFAIDKGSFDGGDQGLLNMFFSNWSTKDIKHHL 542
PDPGWPDCFNSGVFV++PS+ T+ LLQ A++ GSFDG DQGLLN FF NWST DI HL
Sbjct: 157 PDPGWPDCFNSGVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTDIHKHL 216
Query: 543 PFVYNCVSQAFYSYLPAYTHFRADIKVLHFIGPHKPWHHTFDSDTGTVIFQEGCGQNYES 722
PF+YN S Y+Y PA+ F + KV+HF+G KPW++ ++ +G+V+ Q +
Sbjct: 217 PFIYNLSSNTMYTYSPAFKQFGSSAKVVHFLGSMKPWNYKYNPQSGSVLEQGSVSSSQHQ 276
Query: 723 ---LQLWWTTFIAYTKP-----------------LLHDEMGGVCGRMAS 809
L LWWT + P L H ++GG C AS
Sbjct: 277 AAFLHLWWTVYQNNVLPLYKSVQAGEARASPGHTLCHSDVGGPCADSAS 325
>sp|P47011|GLG2_YEAST Glycogen synthesis initiator protein GLG2
Length = 380
Score = 127 bits (320), Expect = 3e-29
Identities = 90/263 (34%), Positives = 127/263 (48%), Gaps = 40/263 (15%)
Frame = +3
Query: 6 AYVTLATNDEYALGALTLAMSL----KHSGTQKELVIMIT-------DNISEAMRNVLSQ 152
A TL + +Y GALTLA L KH+ + E+ + + D ++
Sbjct: 6 AICTLLYSRDYLPGALTLAYQLQKLLKHAVVEDEITLCLLIEKKLFGDEFKPQEIALIRS 65
Query: 153 VFNHIEMVNVLDSNDV------INLGLLERPELGITFTKLHCWRLVQYSKCVFMDADTLV 314
+F I ++ L + NL LL+RPEL T K W LVQ+ + +F+DADTL
Sbjct: 66 LFKEIIIIEPLKDQEKSIEKNKANLELLKRPELSHTLLKARLWELVQFDQVLFLDADTLP 125
Query: 315 IQNIDDLFE---------REELSAAPDPGWPDCFNSGVFVYKPSIDTYVELLQFAIDKGS 467
+ + FE R +++A PD GWPD FN+GV + P +D L F I S
Sbjct: 126 LNK--EFFEILRLYPEQTRFQIAAVPDIGWPDMFNTGVLLLIPDLDMATSLQDFLIKTVS 183
Query: 468 FDGGDQGLLNMFFS---NWSTKDIKH---------HLPFVYNCVSQAF-YSYLPAYTHFR 608
DG DQG+ N FF+ N+S K++ H LPF YN + Y PA F+
Sbjct: 184 IDGADQGIFNQFFNPICNYS-KEVLHKVSPLMEWIRLPFTYNVTMPNYGYQSSPAMNFFQ 242
Query: 609 ADIKVLHFIGPHKPW-HHTFDSD 674
I+++HFIG KPW +T D D
Sbjct: 243 QHIRLIHFIGTFKPWSRNTTDYD 265
>sp|P36143|GLG1_YEAST Glycogen synthesis initiator protein GLG1
Length = 480
Score = 83.6 bits (205), Expect = 7e-16
Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Frame = +3
Query: 348 ELSAAPDPGWPDCFNSGVFVYKPSIDTYVELLQFAIDKGSFDGGDQGLLNMFFS-NWSTK 524
++ A D GWPD FNSGV + P DT L + + S DG DQG+LN FF+ N T
Sbjct: 8 QVGAIADIGWPDMFNSGVMMLIPDADTASVLQNYIFENTSIDGSDQGILNQFFNQNCCTD 67
Query: 525 DIKH--------HLPFVYN-CVSQAFYSYLPAYTHFRADIKVLHFIGPHKPW 653
++ L F YN + Y PA +F+ IK++HFIG HKPW
Sbjct: 68 ELVKDSFSREWVQLSFTYNVTIPNLGYQSSPAMNYFKPSIKLIHFIGKHKPW 119
>sp|Q9Y761|GNT1A_KLULA Glucose N-acetyltransferase 1-A (N-acetylglucosaminyltransferase A)
Length = 460
Score = 47.4 bits (111), Expect = 5e-05
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Frame = +3
Query: 6 AYVTLATNDEYALGALTLAMSLKHSGTQKELVIMITDNISEAMRNVLSQVFNHIEMVNVL 185
AYV + Y ++ L SGTQ +LV+++ ++E + V + +
Sbjct: 97 AYVNYVADKNYVCSSMIHFNRLHESGTQAKLVMLVAKELTELPED--DSVTRMLAQFKEI 154
Query: 186 DSNDVI----NLGLLERPELGIT-FTKLHCWRLVQYSKCVFMDADTLVIQNIDDLF 338
N ++ N+ L + +T TKL + +V+Y + V+ D+D+++ +N+D+LF
Sbjct: 155 SDNCIVKPVENIVLSQGSAQWMTSMTKLRVFGMVEYKRIVYFDSDSIITRNMDELF 210
>sp|Q6CT96|GNT1B_KLULA Glucose N-acetyltransferase 1-B (N-acetylglucosaminyltransferase B)
Length = 453
Score = 46.2 bits (108), Expect = 1e-04
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Frame = +3
Query: 6 AYVTLATNDEYALGALTLAMSLKHSGTQKELVIMITDNIS---------EAMRNVLSQVF 158
AYV T+ EY L L SG++ +L+ ++TD + EA+ N + V
Sbjct: 86 AYVNYITDFEYLCNTLIQFRKLNDSGSKAKLLALVTDTLVNKSKENKEVEALLNKIKSVS 145
Query: 159 NHI---EMVNVLDSNDVINLGLLERPELGITFTKLHCWRLVQYSKCVFMDADTLVIQNID 329
+ + E+ +V+ ND + TKL + L Y + ++MD D ++ +D
Sbjct: 146 DRVAVTEVGSVIQPND--------HTPWSKSLTKLAIFNLTDYERIIYMDNDAIIHDKMD 197
Query: 330 DLF 338
+LF
Sbjct: 198 ELF 200
>sp|Q59ZI3|GNT1_CANAL Glucose N-acetyltransferase 1 (N-acetylglucosaminyltransferase)
Length = 462
Score = 42.0 bits (97), Expect = 0.002
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Frame = +3
Query: 6 AYVTLATNDEYALGALTLAMSLKHSGTQKELVIMITDNI----SEAMRNVLSQVFNHIEM 173
AY+ ATN +Y A+ + L+ + T+ +++I D + + + L QV N ++
Sbjct: 72 AYMQYATNYDYLNLAIINFIHLRKANTKIPNLVIIYDEVLHYYASDKWSELYQVANQYKI 131
Query: 174 VNVLDSNDVINLGLLERPELGITFTKLHCWRLVQYSKCVFMDADTLVI------------ 317
L + +I + +FTK H + V+Y + VF D+D++++
Sbjct: 132 T--LKAAPLIKASYQDDSNWAASFTKFHIFNQVEYDRIVFFDSDSMLVDIPNEIDFDNME 189
Query: 318 ---QNIDDLFE-REELS-AAPDPGW 377
+ID+LF+ +ELS A+P W
Sbjct: 190 SRFNHIDELFKIPQELSFASPQAYW 214
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,525,723
Number of Sequences: 369166
Number of extensions: 2276377
Number of successful extensions: 5439
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5427
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8790245790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)