Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_004_N08
(849 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P53471|ACT2_SCHMA Actin-2 567 e-161
sp|P60712|ACTB_BOVIN Actin, cytoplasmic 1 (Beta-actin) >gi|... 566 e-161
sp|P63260|ACTG_MOUSE Actin, cytoplasmic 2 (Gamma-actin) >gi... 566 e-161
sp|P15475|ACTB_XENBO Actin, cytoplasmic 1 (Beta actin) 566 e-161
sp|Q91ZK5|ACTB_SIGHI Actin, cytoplasmic 1 (Beta-actin) 566 e-161
sp|P53505|ACT5_XENLA Actin, cytoplasmic type 5 566 e-161
sp|P48975|ACTB_CRIGR Actin, cytoplasmic 1 (Beta-actin) 566 e-161
sp|P53478|ACT5_CHICK Actin, cytoplasmic type 5 566 e-161
sp|P10984|ACT2_CAEEL Actin-2 565 e-161
sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cyt... 565 e-161
>sp|P53471|ACT2_SCHMA Actin-2
Length = 376
Score = 567 bits (1461), Expect = e-161
Identities = 279/282 (98%), Positives = 281/282 (99%)
Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 182
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW
Sbjct: 21 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 80
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 362
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQAV
Sbjct: 81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQAV 140
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 542
LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS
Sbjct: 141 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 200
Query: 543 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 722
FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE
Sbjct: 201 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 260
Query: 723 SLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTVLSG 848
+LFQPSFLGMESAG+HETTFNSIMKCDVDIRKDLYANTVLSG
Sbjct: 261 ALFQPSFLGMESAGVHETTFNSIMKCDVDIRKDLYANTVLSG 302
>sp|P60712|ACTB_BOVIN Actin, cytoplasmic 1 (Beta-actin)
sp|P60713|ACTB_SHEEP Actin, cytoplasmic 1 (Beta-actin)
sp|Q5R1X3|ACTB_PANTR Actin, cytoplasmic 1 (Beta-actin)
sp|P60710|ACTB_MOUSE Actin, cytoplasmic 1 (Beta-actin)
sp|Q711N9|ACTB_MESAU Actin, cytoplasmic 1 (Beta-actin)
sp|P60708|ACTB_HORSE Actin, cytoplasmic 1 (Beta-actin)
sp|Q76N69|ACTB_CERAE Actin, cytoplasmic 1 (Beta-actin)
sp|Q71FK5|ACTB_CAVPO Actin, cytoplasmic 1 (Beta-actin)
sp|P60707|ACTB_TRIVU Actin, cytoplasmic 1 (Beta-actin)
sp|P60711|ACTB_RAT Actin, cytoplasmic 1 (Beta-actin)
sp|P60709|ACTB_HUMAN Actin, cytoplasmic 1 (Beta-actin)
sp|P60706|ACTB_CHICK Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 567 bits (1460), Expect = e-161
Identities = 279/282 (98%), Positives = 281/282 (99%)
Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 182
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW
Sbjct: 20 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 79
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 362
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV
Sbjct: 80 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 139
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 542
LSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS
Sbjct: 140 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199
Query: 543 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 722
FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE
Sbjct: 200 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 259
Query: 723 SLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTVLSG 848
+LFQPSFLGMES GIHETTFNSIMKCDVDIRKDLYANTVLSG
Sbjct: 260 ALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301
>sp|P63260|ACTG_MOUSE Actin, cytoplasmic 2 (Gamma-actin)
sp|P63259|ACTG_RAT Actin, cytoplasmic 2 (Gamma-actin)
sp|P63257|ACTG_TRIVU Actin, cytoplasmic 2 (Gamma-actin)
sp|P63261|ACTG_HUMAN Actin, cytoplasmic 2 (Gamma-actin)
sp|P63258|ACTG_BOVIN Actin, cytoplasmic 2 (Gamma-actin)
Length = 375
Score = 567 bits (1460), Expect = e-161
Identities = 279/282 (98%), Positives = 281/282 (99%)
Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 182
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW
Sbjct: 20 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 79
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 362
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV
Sbjct: 80 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 139
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 542
LSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS
Sbjct: 140 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199
Query: 543 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 722
FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE
Sbjct: 200 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 259
Query: 723 SLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTVLSG 848
+LFQPSFLGMES GIHETTFNSIMKCDVDIRKDLYANTVLSG
Sbjct: 260 ALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301
>sp|P15475|ACTB_XENBO Actin, cytoplasmic 1 (Beta actin)
Length = 376
Score = 567 bits (1460), Expect = e-161
Identities = 279/282 (98%), Positives = 281/282 (99%)
Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 182
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW
Sbjct: 21 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 80
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 362
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV
Sbjct: 81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 140
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 542
LSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS
Sbjct: 141 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 200
Query: 543 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 722
FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE
Sbjct: 201 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 260
Query: 723 SLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTVLSG 848
+LFQPSFLGMES GIHETTFNSIMKCDVDIRKDLYANTVLSG
Sbjct: 261 ALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 302
>sp|Q91ZK5|ACTB_SIGHI Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 567 bits (1460), Expect = e-161
Identities = 279/282 (98%), Positives = 281/282 (99%)
Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 182
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW
Sbjct: 20 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 79
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 362
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV
Sbjct: 80 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 139
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 542
LSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS
Sbjct: 140 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199
Query: 543 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 722
FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE
Sbjct: 200 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 259
Query: 723 SLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTVLSG 848
+LFQPSFLGMES GIHETTFNSIMKCDVDIRKDLYANTVLSG
Sbjct: 260 ALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301
>sp|P53505|ACT5_XENLA Actin, cytoplasmic type 5
Length = 376
Score = 567 bits (1460), Expect = e-161
Identities = 279/282 (98%), Positives = 281/282 (99%)
Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 182
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW
Sbjct: 21 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 80
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 362
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV
Sbjct: 81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 140
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 542
LSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS
Sbjct: 141 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 200
Query: 543 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 722
FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE
Sbjct: 201 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 260
Query: 723 SLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTVLSG 848
+LFQPSFLGMES GIHETTFNSIMKCDVDIRKDLYANTVLSG
Sbjct: 261 ALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 302
>sp|P48975|ACTB_CRIGR Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 567 bits (1460), Expect = e-161
Identities = 279/282 (98%), Positives = 281/282 (99%)
Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 182
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW
Sbjct: 20 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 79
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 362
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV
Sbjct: 80 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 139
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 542
LSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS
Sbjct: 140 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199
Query: 543 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 722
FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE
Sbjct: 200 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 259
Query: 723 SLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTVLSG 848
+LFQPSFLGMES GIHETTFNSIMKCDVDIRKDLYANTVLSG
Sbjct: 260 ALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301
>sp|P53478|ACT5_CHICK Actin, cytoplasmic type 5
Length = 376
Score = 566 bits (1458), Expect = e-161
Identities = 278/282 (98%), Positives = 281/282 (99%)
Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 182
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW
Sbjct: 21 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 80
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 362
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV
Sbjct: 81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 140
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 542
LSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS
Sbjct: 141 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 200
Query: 543 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 722
FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE
Sbjct: 201 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 260
Query: 723 SLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTVLSG 848
++FQPSFLGMES GIHETTFNSIMKCDVDIRKDLYANTVLSG
Sbjct: 261 AIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 302
>sp|P10984|ACT2_CAEEL Actin-2
Length = 376
Score = 565 bits (1457), Expect = e-161
Identities = 277/282 (98%), Positives = 282/282 (100%)
Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 182
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW
Sbjct: 21 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 80
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 362
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV
Sbjct: 81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 140
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 542
LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS
Sbjct: 141 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 200
Query: 543 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 722
FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPE
Sbjct: 201 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPE 260
Query: 723 SLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTVLSG 848
+LFQPSFLGMESAGIHET++NSIMKCD+DIRKDLYANTVLSG
Sbjct: 261 ALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
>sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cytoplasmic beta actin)
Length = 375
Score = 565 bits (1457), Expect = e-161
Identities = 278/282 (98%), Positives = 281/282 (99%)
Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 182
GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW
Sbjct: 20 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 79
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 362
DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV
Sbjct: 80 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 139
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 542
LSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS
Sbjct: 140 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199
Query: 543 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 722
FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE
Sbjct: 200 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 259
Query: 723 SLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTVLSG 848
+LFQPSFLGMES GIHETT+NSIMKCDVDIRKDLYANTVLSG
Sbjct: 260 ALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSG 301
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,090,866
Number of Sequences: 369166
Number of extensions: 2181905
Number of successful extensions: 6531
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6359
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8341863645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)