Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_004_M24
(759 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q05870|MYSP_SCHJA Paramyosin (Antigen Sj97) 256 5e-68
sp|P06198|MYSP_SCHMA Paramyosin 254 2e-67
sp|P35417|MYSP_ECHGR Paramyosin 238 1e-62
sp|P35418|MYSP_TAESO Paramyosin (Antigen B) (AgB) 238 1e-62
sp|Q8T305|MYSP_TAESA Paramyosin 236 5e-62
sp|O96064|MYSP_MYTGA Paramyosin 191 1e-48
sp|P05661|MYSA_DROME Myosin heavy chain, muscle 146 5e-35
sp|P02565|MYH3_CHICK Myosin heavy chain, fast skeletal musc... 140 4e-33
sp|Q90339|MYSS_CYPCA Myosin heavy chain, fast skeletal muscle 139 6e-33
sp|P13538|MYSS_CHICK Myosin heavy chain, skeletal muscle, a... 137 3e-32
>sp|Q05870|MYSP_SCHJA Paramyosin (Antigen Sj97)
Length = 866
Score = 256 bits (654), Expect = 5e-68
Identities = 133/181 (73%), Positives = 158/181 (87%)
Frame = +1
Query: 1 DNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRC 180
+NYK A++LRK LEIEIREIT+KLEEAEA+ATREG+R +QKLQ R+RELE +F+ E RRC
Sbjct: 691 ENYKHAEALRKQLEIEIREITVKLEEAEAFATREGRRMVQKLQARVRELEAEFDGESRRC 750
Query: 181 KEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAM 360
K+ALAQARKFERQ+KELQ QA+DDRRMV+ELQDLLDKTQ+KM+AYKRQLEE+E+VS + M
Sbjct: 751 KDALAQARKFERQYKELQTQAEDDRRMVLELQDLLDKTQMKMKAYKRQLEEMEEVSQITM 810
Query: 361 NKYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVNTSRGARATS 540
NKYRKAQQQIE+AEHRADMAER +TVRR G PG RA+SV RE S V ++RG RATS
Sbjct: 811 NKYRKAQQQIEEAEHRADMAERTVTVRRVG---PGG--RAVSVARELS-VTSNRGMRATS 864
Query: 541 I 543
+
Sbjct: 865 M 865
Score = 47.8 bits (112), Expect = 3e-05
Identities = 28/133 (21%), Positives = 63/133 (47%)
Frame = +1
Query: 10 KKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEA 189
++ +SLRK+ I E+T+ + E E E R ++ + + +LE +A +
Sbjct: 497 EELESLRKSTTRTIEELTVTITEMEVKYKSELSRLKKRYESSIADLEIQLDATNKANANL 556
Query: 190 LAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKY 369
+ + + ++ K+L+ DD+RR+ ++ L T+ K ++EE+
Sbjct: 557 MKENKNLAQRVKDLETFLDDERRLREAAENNLQITEHKRIQLANEVEELRSAMENLERLR 616
Query: 370 RKAQQQIEDAEHR 408
+ A+ ++E+ + R
Sbjct: 617 KHAETELEETQSR 629
>sp|P06198|MYSP_SCHMA Paramyosin
Length = 866
Score = 254 bits (648), Expect = 2e-67
Identities = 133/180 (73%), Positives = 157/180 (87%)
Frame = +1
Query: 4 NYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCK 183
NYK A++LRK LEIEIREIT+KLEEAEA ATREG+R +QKLQ R+RELE++F+ E RRCK
Sbjct: 692 NYKHAEALRKQLEIEIREITVKLEEAEASATREGRRMVQKLQARVRELESEFDGESRRCK 751
Query: 184 EALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMN 363
+ALAQARKFERQ+KELQ QA+DDRRMV+ELQDLLDKTQ+KM+AYKRQLEE+E+VS + MN
Sbjct: 752 DALAQARKFERQYKELQTQAEDDRRMVLELQDLLDKTQMKMKAYKRQLEEMEEVSQITMN 811
Query: 364 KYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVNTSRGARATSI 543
KYRKAQQQIE+AEHRADMAER +TVRR G PG RA+SV RE S V ++RG RATS+
Sbjct: 812 KYRKAQQQIEEAEHRADMAERTVTVRRVG---PGG--RAVSVARELS-VTSNRGMRATSM 865
Score = 48.1 bits (113), Expect = 3e-05
Identities = 28/133 (21%), Positives = 63/133 (47%)
Frame = +1
Query: 10 KKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEA 189
++ +SLRK+ I E+T+ + E E E R ++ + + +LE + +
Sbjct: 497 EELESLRKSTTRTIEELTVTITEMEVKYKSELSRLKKRYESNIADLEIQLDTANKANANL 556
Query: 190 LAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKY 369
+ + + ++ K+L+ D++RR+ ++ L T+ K ++EEI
Sbjct: 557 MKENKNLSQRVKDLETFLDEERRLREAAENNLQITEHKRLQLANEIEEIRSTLENLERLR 616
Query: 370 RKAQQQIEDAEHR 408
+ A+ ++E+A+ R
Sbjct: 617 KHAETELEEAQSR 629
>sp|P35417|MYSP_ECHGR Paramyosin
Length = 863
Score = 238 bits (608), Expect = 1e-62
Identities = 124/181 (68%), Positives = 154/181 (85%)
Frame = +1
Query: 1 DNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRC 180
+NYK+A++LRK LEIEIREIT+KLEEAEA+ATREG+R +QKLQ R+RELE + + E RR
Sbjct: 687 ENYKRAETLRKQLEIEIREITVKLEEAEAFATREGRRMVQKLQNRVRELEAELDGEIRRA 746
Query: 181 KEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAM 360
KEA A ARK+ERQFKELQ Q++DD+RM++ELQDLLDKTQ+KM+AYKRQLEE E+VS + M
Sbjct: 747 KEAFASARKYERQFKELQTQSEDDKRMILELQDLLDKTQIKMKAYKRQLEEQEEVSQLTM 806
Query: 361 NKYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVNTSRGARATS 540
+KYRKAQQQIE+AEHRADMAER +T++R + G RA+SVVRE ++V SRG RATS
Sbjct: 807 SKYRKAQQQIEEAEHRADMAERTITIKR---TIGGPGSRAVSVVREINSV--SRGNRATS 861
Query: 541 I 543
I
Sbjct: 862 I 862
Score = 46.2 bits (108), Expect = 1e-04
Identities = 29/133 (21%), Positives = 60/133 (45%)
Frame = +1
Query: 10 KKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEA 189
++ ++LRK+ I E+T + E E + R +K + + ELE + +
Sbjct: 493 EELENLRKSTTRTIEELTTTISEMEVRFKSDMSRLKKKYEATISELEVQLDVANKANASL 552
Query: 190 LAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKY 369
+ + ++ +ELQ +D+RR + L ++ K A ++EEI ++
Sbjct: 553 NRENKALAQRVQELQTALEDERRAREAAESNLQVSERKRIALTSEVEEIRSQLELSDRAR 612
Query: 370 RKAQQQIEDAEHR 408
+ A+ ++ DA R
Sbjct: 613 KNAESELNDANGR 625
>sp|P35418|MYSP_TAESO Paramyosin (Antigen B) (AgB)
Length = 863
Score = 238 bits (608), Expect = 1e-62
Identities = 124/181 (68%), Positives = 154/181 (85%)
Frame = +1
Query: 1 DNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRC 180
+NYK+A++LRK LEIEIREIT+KLEEAEA+ATREG+R +QKLQ R+RELE + + E RR
Sbjct: 687 ENYKRAETLRKQLEIEIREITVKLEEAEAFATREGRRMVQKLQNRVRELEAELDGEIRRA 746
Query: 181 KEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAM 360
KEA A ARK+ERQFKELQ Q++DD+RM++ELQDLLDKTQ+KM+AYKRQLEE E+VS + M
Sbjct: 747 KEAFANARKYERQFKELQTQSEDDKRMILELQDLLDKTQIKMKAYKRQLEEQEEVSQLTM 806
Query: 361 NKYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVNTSRGARATS 540
+KYRKAQQQIE+AEHRADMAER +T++R + G RA+SVVRE ++V SRG RATS
Sbjct: 807 SKYRKAQQQIEEAEHRADMAERTITIKR---TIGGPGSRAVSVVREINSV--SRGNRATS 861
Query: 541 I 543
I
Sbjct: 862 I 862
Score = 45.8 bits (107), Expect = 1e-04
Identities = 29/133 (21%), Positives = 60/133 (45%)
Frame = +1
Query: 10 KKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEA 189
++ ++LRK+ I E+T + E E + R +K + + ELE + +
Sbjct: 493 EELENLRKSTTRTIEELTTTISEMEVRFKSDMSRLKKKYEATISELEVQLDVANKANVNL 552
Query: 190 LAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKY 369
+ + ++ +ELQ +D+RR + L ++ K A ++EEI ++
Sbjct: 553 NRENKTLAQRVQELQAALEDERRAREAAESNLQVSERKRIALASEVEEIRSQLELSDRAR 612
Query: 370 RKAQQQIEDAEHR 408
+ A+ ++ DA R
Sbjct: 613 KNAESELNDANGR 625
>sp|Q8T305|MYSP_TAESA Paramyosin
Length = 863
Score = 236 bits (602), Expect = 5e-62
Identities = 123/181 (67%), Positives = 153/181 (84%)
Frame = +1
Query: 1 DNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRC 180
+NY +A++LRK LEIEIREIT+KLEEAEA+ATREG+R +QKLQ R+RELE + + E RR
Sbjct: 687 ENYXRAETLRKQLEIEIREITVKLEEAEAFATREGRRMVQKLQNRVRELEAELDGEIRRA 746
Query: 181 KEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAM 360
KEA A ARK+ERQFKELQ Q++DD+RM++ELQDLLDKTQ+KM+AYKRQLEE E+VS + M
Sbjct: 747 KEAFANARKYERQFKELQTQSEDDKRMILELQDLLDKTQIKMKAYKRQLEEQEEVSQLTM 806
Query: 361 NKYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVNTSRGARATS 540
+KYRKAQQQIE+AEHRADMAER +T++R + G RA+SVVRE ++V SRG RATS
Sbjct: 807 SKYRKAQQQIEEAEHRADMAERTITIKR---TIGGPGSRAVSVVREINSV--SRGNRATS 861
Query: 541 I 543
I
Sbjct: 862 I 862
Score = 46.2 bits (108), Expect = 1e-04
Identities = 29/133 (21%), Positives = 60/133 (45%)
Frame = +1
Query: 10 KKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEA 189
++ ++LRK+ I E+T + E E + R +K + + ELE + +
Sbjct: 493 EELENLRKSTTRTIEELTTTISEMEVRFKSDMSRLKKKYEATISELEVQLDVANKANANL 552
Query: 190 LAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKY 369
+ + ++ +ELQ +D+RR + L ++ K A ++EEI ++
Sbjct: 553 NRENKTLAQRVQELQAALEDERRAREAAESNLQVSERKRIALASEVEEIRSQLELSDRAR 612
Query: 370 RKAQQQIEDAEHR 408
+ A+ ++ DA R
Sbjct: 613 KNAESELNDANGR 625
>sp|O96064|MYSP_MYTGA Paramyosin
Length = 864
Score = 191 bits (486), Expect = 1e-48
Identities = 101/171 (59%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Frame = +1
Query: 1 DNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRC 180
DNYK A+SLRK LEIEIREIT++LEEAEA+A REGKR I KLQ R+R+LE + EA+QRR
Sbjct: 700 DNYKNAESLRKQLEIEIREITVRLEEAEAFAQREGKRQIAKLQARIRDLENELEADQRRL 759
Query: 181 KEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAM 360
+EA A ARKFERQ+KE Q +D+DRR V EL + D+ +K + YKR +EE EDV+++ M
Sbjct: 760 REAAASARKFERQWKETVQASDEDRRQVAELTSITDQLTMKCKTYKRMIEEAEDVASITM 819
Query: 361 NKYRKAQQQIEDAEHRADMAERHL-TVRRAGSVMPGSTYRAISVVRETSTV 510
NKYRKAQ I++AE RADMAE++L TVRR+ R++SV RE + V
Sbjct: 820 NKYRKAQSLIDEAEQRADMAEKNLQTVRRS---------RSMSVSREVTRV 861
Score = 46.2 bits (108), Expect = 1e-04
Identities = 32/142 (22%), Positives = 66/142 (46%)
Frame = +1
Query: 10 KKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEA 189
++ DS+RK+ I E+ L E E E R +K + +RELE + R E
Sbjct: 506 EEIDSIRKSSARAIDELQRTLVEVETRYKTEISRIKKKYETDIRELEGALDNANRANAEY 565
Query: 190 LAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKY 369
L Q + + + +EL+ Q ++ R + + ++ L ++ K +++LE+ + A
Sbjct: 566 LKQIKSLQNRNRELELQLEEATRQLDDTRNQLSVSERKRITIQQELEDARSLLEHAERAR 625
Query: 370 RKAQQQIEDAEHRADMAERHLT 435
+ A+ ++ + R + +T
Sbjct: 626 KNAENELGEVTVRLTEVQLQVT 647
Score = 42.7 bits (99), Expect = 0.001
Identities = 34/132 (25%), Positives = 59/132 (44%)
Frame = +1
Query: 25 LRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQAR 204
++K E +IRE+ L+ A A E + I+ LQ R RELE E R+ + Q
Sbjct: 540 IKKKYETDIRELEGALDNANR-ANAEYLKQIKSLQNRNRELELQLEEATRQLDDTRNQLS 598
Query: 205 KFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQ 384
ER+ +QQ+ +D R ++ + + ++ +L E++ T N R+ +
Sbjct: 599 VSERKRITIQQELEDARSLLEHAERARKNAENELGEVTVRLTEVQLQVTALTNDKRRMEA 658
Query: 385 QIEDAEHRADMA 420
I + D A
Sbjct: 659 DIAAMQSDLDDA 670
Score = 32.0 bits (71), Expect = 1.9
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = +1
Query: 10 KKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEA 189
++ + +R+ L I+I+E+ E+ K KL V +RE+ + E Q ++
Sbjct: 309 EELEEIRRRLSIKIQELEDTCEQLRTRCNTLEKTK-NKLTVEIREITIELENTQIIVQDL 367
Query: 190 LAQARKFERQFKELQQQADD 249
+ R+ E + LQ++ DD
Sbjct: 368 TKRNRQLENENAALQKRCDD 387
>sp|P05661|MYSA_DROME Myosin heavy chain, muscle
Length = 1962
Score = 146 bits (369), Expect = 5e-35
Identities = 82/182 (45%), Positives = 122/182 (67%)
Frame = +1
Query: 1 DNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRC 180
D+ + + LRK LE +I+E+ ++L+EAEA A + GK+AIQKL+ R+RELE + + EQRR
Sbjct: 1773 DHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRH 1832
Query: 181 KEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAM 360
+A RK ER+ KEL Q+++DR+ +QDL+DK Q K++ YKRQ+EE E+++ + +
Sbjct: 1833 ADAQKNLRKSERRVKELSFQSEEDRKNHERMQDLVDKLQQKIKTYKRQIEEAEEIAALNL 1892
Query: 361 NKYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVNTSRGARATS 540
K+RKAQQ++E+AE RAD+AE+ ++ RA RA SV R S RATS
Sbjct: 1893 AKFRKAQQELEEAEERADLAEQAISKFRAKG-------RAGSVGR-----GASPAPRATS 1940
Query: 541 IR 546
+R
Sbjct: 1941 VR 1942
Score = 50.4 bits (119), Expect = 5e-06
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Frame = +1
Query: 4 NYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCK 183
N K+ + + + E+ IT KLE+ + + +R I++LQ R+ ELE + EAE++
Sbjct: 1071 NKKELEQTIQRKDKELSSITAKLEDEQVVVLKH-QRQIKELQARIEELEEEVEAERQARA 1129
Query: 184 EALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE--IEDVSTVA 357
+A Q R+ +EL ++ ++ +L K + ++ +R LEE I+ ST+A
Sbjct: 1130 KAEKQRADLARELEELGERLEEAGGATSAQIELNKKREAELSKLRRDLEEANIQHESTLA 1189
Query: 358 MNKYRKAQQQIEDAEHRADMAER 426
N +K + + + D +
Sbjct: 1190 -NLRKKHNDAVAEMAEQVDQLNK 1211
Score = 50.1 bits (118), Expect = 7e-06
Identities = 28/111 (25%), Positives = 58/111 (52%)
Frame = +1
Query: 76 EAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDR 255
EAEA E R +KL+ + ELE + + EA +++++Q K++Q ++++
Sbjct: 1601 EAEAKGKAEALRMKKKLEADINELEIALDHANKANAEAQKNIKRYQQQLKDIQTALEEEQ 1660
Query: 256 RMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHR 408
R + ++ L ++ + A + +LEE + A R+A+Q++ DA +
Sbjct: 1661 RARDDAREQLGISERRANALQNELEESRTLLEQADRGRRQAEQELADAHEQ 1711
Score = 46.6 bits (109), Expect = 7e-05
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 28/175 (16%)
Frame = +1
Query: 4 NYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAI----------QKLQVRLRELET 153
N + + RK LE E E+ LEEAEA +E + + Q++ R++E E
Sbjct: 1521 NIHEIEKARKRLEAEKDELQAALEEAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEE 1580
Query: 154 DFE------------------AEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQD 279
+FE AE + EAL +K E EL+ D + E
Sbjct: 1581 EFENTRKNHQRALDSMQASLEAEAKGKAEALRMKKKLEADINELEIALDHANKANAE--- 1637
Query: 280 LLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRR 444
Q ++ Y++QL++I+ A++Q+ +E RA+ + L R
Sbjct: 1638 ----AQKNIKRYQQQLKDIQTALEEEQRARDDAREQLGISERRANALQNELEESR 1688
>sp|P02565|MYH3_CHICK Myosin heavy chain, fast skeletal muscle, embryonic
Length = 1940
Score = 140 bits (353), Expect = 4e-33
Identities = 68/151 (45%), Positives = 108/151 (71%)
Frame = +1
Query: 1 DNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRC 180
D + ++K L+ ++++ +L+EAE A + GK+ IQKL+ R+RELE + +AEQ+R
Sbjct: 1779 DTSAHLERMKKNLDQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVRELEGEVDAEQKRS 1838
Query: 181 KEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAM 360
EA+ RK+ER+ KEL Q+++DR+ V+ LQDL+DK Q+K+++YKRQ EE E++S V +
Sbjct: 1839 AEAVKGVRKYERRVKELTYQSEEDRKNVLRLQDLVDKLQMKVKSYKRQAEEAEELSNVNL 1898
Query: 361 NKYRKAQQQIEDAEHRADMAERHLTVRRAGS 453
+K+RK Q ++E+AE RAD+AE + RA S
Sbjct: 1899 SKFRKIQHELEEAEERADIAESQVNKLRAKS 1929
Score = 46.6 bits (109), Expect = 7e-05
Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Frame = +1
Query: 10 KKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEA 189
++ D K + EI +I K+E+ +A + K+ I++LQ R+ ELE + EAE+ +A
Sbjct: 1079 QQLDEKLKKKDFEISQIQSKIEDEQALGMQLQKK-IKELQARIEELEEEIEAERTSRAKA 1137
Query: 190 LAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE--IEDVSTVAMN 363
R+ +E+ ++ ++ D+ K + + + +R LEE ++ +T A
Sbjct: 1138 EKHRADLSRELEEISERLEEAGGATAAQIDMNKKREAEFQKMRRDLEEATLQHEATAAAL 1197
Query: 364 KYRKAQQQIEDAE 402
+ + A + E
Sbjct: 1198 RKKHADSTADVGE 1210
Score = 40.8 bits (94), Expect = 0.004
Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 36/204 (17%)
Frame = +1
Query: 19 DSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETD-------------- 156
+ ++K +E E E+ LEEAEA E + I ++Q+ L ++++D
Sbjct: 1532 EKVKKQIEQEKSELQTALEEAEASLEHE-EGKILRVQLELNQVKSDIDRKIAEKDEEIDQ 1590
Query: 157 ---------------FEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVE------- 270
+AE R EAL +K E E++ Q R E
Sbjct: 1591 LKRNHLRVVDSMQSTLDAEIRSRNEALRLKKKMEGDLNEIEIQLSHANRQAAEAQKNLRN 1650
Query: 271 LQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAG 450
Q +L TQ+ + R E++++ + + Q +IE+ + ER V
Sbjct: 1651 TQGVLKDTQIHLDDALRSQEDLKEQVAMVERRANLLQAEIEELRAALEQTERSRKVAEQ- 1709
Query: 451 SVMPGSTYRAISVVRETSTVNTSR 522
++ S + + TS +NT +
Sbjct: 1710 ELLDASERVQLLHTQNTSLINTKK 1733
Score = 34.3 bits (77), Expect = 0.37
Identities = 26/119 (21%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Frame = +1
Query: 10 KKADSLRK--TLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAE----- 168
K A+S ++ ++ E + +L ++EA ++ + LQ + +L+ +AE
Sbjct: 846 KSAESEKEMANMKEEFEKTKEELAKSEAKRKELEEKMVSLLQEK-NDLQLQVQAEADGLA 904
Query: 169 --QRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIE 339
+ RC + + + E + KEL ++A+D+ M EL K + + K+ ++++E
Sbjct: 905 DAEERCDQLIKTKIQLEAKIKELTERAEDEEEMNAELTAKKRKLEDECSELKKDIDDLE 963
Score = 32.7 bits (73), Expect = 1.1
Identities = 18/98 (18%), Positives = 46/98 (46%)
Frame = +1
Query: 121 KLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQL 300
+L++ + +L ++ E+ + R E Q E++ + ++ +R + ++ + Q
Sbjct: 1228 ELKMEIDDLASNMESVSKAKANLEKMCRSLEDQLSEIKTKEEEQQRTINDISAQKARLQT 1287
Query: 301 KMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRAD 414
+ Y RQ+EE + + + + QQIE+ + +
Sbjct: 1288 ESGEYSRQVEEKDALISQLSRGKQAFTQQIEELKRHLE 1325
>sp|Q90339|MYSS_CYPCA Myosin heavy chain, fast skeletal muscle
Length = 1935
Score = 139 bits (351), Expect = 6e-33
Identities = 66/151 (43%), Positives = 106/151 (70%)
Frame = +1
Query: 1 DNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRC 180
D + ++K LE+ ++++ +L+EAE+ A + GK+ +QKL+ R+RELE + EAEQRR
Sbjct: 1775 DTSAHLERMKKNLEVTVKDLQHRLDEAESLAMKGGKKQLQKLESRVRELEAEVEAEQRRG 1834
Query: 181 KEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAM 360
+A+ RK+ER+ KEL Q ++D++ V+ LQDL+DK QLK++ YKRQ EE E+ + +
Sbjct: 1835 ADAVKGVRKYERRVKELTYQTEEDKKNVIRLQDLVDKLQLKVKVYKRQAEEAEEQTNTHL 1894
Query: 361 NKYRKAQQQIEDAEHRADMAERHLTVRRAGS 453
++YRK Q ++E+A+ RAD+AE + RA S
Sbjct: 1895 SRYRKVQHELEEAQERADVAESQVNKLRAKS 1925
Score = 44.7 bits (104), Expect = 3e-04
Identities = 30/133 (22%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Frame = +1
Query: 10 KKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEA 189
+++D K + EI ++ K+E+ ++ + K+ I++LQ R+ ELE + EAE+ +
Sbjct: 1075 QQSDEKIKKKDFEISQLLSKIEDEQSLGAQLQKK-IKELQARIEELEEEIEAERAARAKV 1133
Query: 190 LAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE--IEDVSTVAMN 363
Q R+ +E+ ++ ++ ++ K + + + +R LEE ++ +T A
Sbjct: 1134 EKQRADLSRELEEISERLEEAGGATAAQIEMNKKREAEFQKMRRDLEESTLQHEATAAAL 1193
Query: 364 KYRKAQQQIEDAE 402
+ +A E E
Sbjct: 1194 RKEQADSVAELGE 1206
Score = 44.3 bits (103), Expect = 4e-04
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 9/170 (5%)
Frame = +1
Query: 19 DSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQ 198
+ +KT+E E EI LEEAE E + I ++Q+ L +++++ + + E + Q
Sbjct: 1528 EKAKKTVESEKSEIQTALEEAEGTLEHEESK-ILRVQLELNQVKSEIDRKLAEKDEEMEQ 1586
Query: 199 -ARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRK 375
R +R +Q D + R + + K + + + QL + A + R
Sbjct: 1587 IKRNSQRVIDSMQSTLDSEVRSRNDALRVKKKMEGDLNEMEIQLSHANRQAAEAQKQLRN 1646
Query: 376 AQQQIEDAE--------HRADMAERHLTVRRAGSVMPGSTYRAISVVRET 501
Q Q++DA+ + DM E+ V R S+M + + +T
Sbjct: 1647 VQGQLKDAQLHLDEAVRGQEDMKEQVAMVERRNSLMQAEIEELRAALEQT 1696
Score = 35.0 bits (79), Expect = 0.22
Identities = 31/146 (21%), Positives = 64/146 (43%), Gaps = 12/146 (8%)
Frame = +1
Query: 13 KADSLRKTLEIEIREITIKLEEAEAYATREGK-----RAIQKLQ-------VRLRELETD 156
+ D TL+ E ++ E+A++ A + R QKL+ + + +L ++
Sbjct: 1176 RRDLEESTLQHEATAAALRKEQADSVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLTSN 1235
Query: 157 FEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEI 336
EA + R E Q E++ ++D++ R + ++ + Q + + RQLEE
Sbjct: 1236 MEAVAKAKANLEKMCRTLEDQLSEIKTKSDENVRQLNDMNAQRARLQTENGEFSRQLEEK 1295
Query: 337 EDVSTVAMNKYRKAQQQIEDAEHRAD 414
E + + + QQIE+ + +
Sbjct: 1296 EALVSQLTRGKQAYTQQIEELKRHIE 1321
Score = 30.8 bits (68), Expect = 4.1
Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 23/153 (15%)
Frame = +1
Query: 13 KADSLRKT---LEIEIREITIKLEEAEAYATR--------------------EGKRAIQK 123
K SL KT L+ E+ ++ I +E A + A E + ++
Sbjct: 1411 KCASLEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNFDKVLAEWKQKYEESQAELEG 1470
Query: 124 LQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLK 303
Q R L T+ + +EAL +R+ K LQQ+ D L + L +T
Sbjct: 1471 AQKEARSLSTELFKMKNSYEEALDHLETLKRENKNLQQEISD-------LTEQLGET--- 1520
Query: 304 MRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAE 402
+ + E+E ++ + Q +E+AE
Sbjct: 1521 ----GKSIHELEKAKKTVESEKSEIQTALEEAE 1549
>sp|P13538|MYSS_CHICK Myosin heavy chain, skeletal muscle, adult
Length = 1939
Score = 137 bits (345), Expect = 3e-32
Identities = 63/151 (41%), Positives = 107/151 (70%)
Frame = +1
Query: 1 DNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRC 180
D + ++K ++ ++++ ++L+EAE A + GK+ +QKL+ R+RELE + ++EQ+R
Sbjct: 1777 DTSAHLERMKKNMDQTVKDLHVRLDEAEQLALKGGKKQLQKLEARVRELEGEVDSEQKRS 1836
Query: 181 KEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAM 360
EA+ RK+ER+ KEL Q ++DR+ ++ LQDL+DK Q+K+++YKRQ EE E++S V +
Sbjct: 1837 AEAVKGVRKYERRVKELTYQCEEDRKNILRLQDLVDKLQMKVKSYKRQAEEAEELSNVNL 1896
Query: 361 NKYRKAQQQIEDAEHRADMAERHLTVRRAGS 453
+K+RK Q ++E+AE RAD+AE + R S
Sbjct: 1897 SKFRKIQHELEEAEERADIAESQVNKLRVKS 1927
Score = 45.8 bits (107), Expect = 1e-04
Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Frame = +1
Query: 10 KKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEA 189
++ D K + EI +I K+E+ +A + K+ I++LQ R+ ELE + EAE+ +A
Sbjct: 1077 QQLDEKLKKKDFEISQIQSKIEDEQALGMQLQKK-IKELQARIEELEEEIEAERTSRAKA 1135
Query: 190 LAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE--IEDVSTVAMN 363
R+ +E+ ++ ++ ++ K + + + +R LEE ++ +T A
Sbjct: 1136 EKHRADLSRELEEISERLEEAGGATAAQIEMNKKREAEFQKMRRDLEEATLQHEATAAAL 1195
Query: 364 KYRKAQQQIEDAE 402
+ + A E E
Sbjct: 1196 RKKHADSTAELGE 1208
Score = 40.8 bits (94), Expect = 0.004
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 35/203 (17%)
Frame = +1
Query: 19 DSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETD-------------- 156
+ ++K +E E E+ LEEAEA E + I +LQ+ L +++++
Sbjct: 1530 EKVKKHVEQEKSELQASLEEAEASLEHE-EGKILRLQLELNQIKSEIDRKIAEKDEEIDQ 1588
Query: 157 ---------------FEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDK 291
+AE R EAL +K E E++ Q RM E Q L
Sbjct: 1589 LKRNHLRIVESMQSTLDAEIRSRNEALRLKKKMEGDLNEMEIQLSHANRMAAEAQKNLRN 1648
Query: 292 TQLKMRAYKRQLEEI----EDV-STVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGSV 456
TQ ++ + L++ ED+ VAM + R Q E E R + + + + A
Sbjct: 1649 TQGTLKDTQIHLDDALRTQEDLKEQVAMVERRANLLQAEVEELRGALEQTERSRKVAEQE 1708
Query: 457 MPGSTYRA-ISVVRETSTVNTSR 522
+ +T R + + TS +NT +
Sbjct: 1709 LLDATERVQLLHTQNTSLINTKK 1731
Score = 34.3 bits (77), Expect = 0.37
Identities = 20/98 (20%), Positives = 46/98 (46%)
Frame = +1
Query: 121 KLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQL 300
+L++ + +L ++ E+ + R E Q E++ + + ++RM+ +L + Q
Sbjct: 1226 ELKMEIDDLASNMESVSKAKANLEKMCRTLEDQLSEIKTKEEQNQRMINDLNTQRARLQT 1285
Query: 301 KMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRAD 414
+ Y RQ EE + + + + QQIE+ + +
Sbjct: 1286 ETGEYSRQAEEKDALISQLSRGKQGFTQQIEELKRHLE 1323
Score = 32.3 bits (72), Expect = 1.4
Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Frame = +1
Query: 13 KADSLRKTLEIE-----IREITIKLEEAEAYATREGKRAIQKLQVRLRE-----LETDFE 162
K L K+ E E ++E K +E A + + K +K+ V L+E L+ E
Sbjct: 838 KIKPLLKSAESEKEMANMKEEFEKTKEELAKSEAKRKELEEKMVVLLQEKNDLQLQVQAE 897
Query: 163 AE-----QRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQL 327
A+ + RC + + + E + KE+ ++A+D+ + EL K + + K+ +
Sbjct: 898 ADSLADAEERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDI 957
Query: 328 EEIE 339
+++E
Sbjct: 958 DDLE 961
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,946,760
Number of Sequences: 369166
Number of extensions: 1003268
Number of successful extensions: 5122
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4953
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6970118400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)