Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_004_L13
(889 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase 426 e-119
sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase 412 e-115
sp|P53448|ALDOC_CARAU Fructose-bisphosphate aldolase C (Bra... 395 e-110
sp|P07764|ALF_DROME Fructose-bisphosphate aldolase 391 e-108
sp|P00883|ALDOA_RABIT Fructose-bisphosphate aldolase A (Mus... 391 e-108
sp|P05064|ALDOA_MOUSE Fructose-bisphosphate aldolase A (Mus... 390 e-108
sp|P05065|ALDOA_RAT Fructose-bisphosphate aldolase A (Muscl... 390 e-108
sp|P04075|ALDOA_HUMAN Fructose-bisphosphate aldolase A (Mus... 389 e-108
sp|Q9GKW3|ALDOC_MACFA Fructose-bisphosphate aldolase C (Bra... 385 e-106
sp|P09972|ALDOC_HUMAN Fructose-bisphosphate aldolase C (Bra... 384 e-106
>sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase
Length = 363
Score = 426 bits (1095), Expect = e-119
Identities = 208/294 (70%), Positives = 242/294 (82%)
Frame = +1
Query: 7 DNRRNYRHLLFSADKSLGNHISGVILYHETLYQKAEDGTPLVKLLKDRGIIPGIKVDSGV 186
+NRR YR LLF+ D HISGVIL+HET+YQK +DG P V+LL++RG++PGIKVD GV
Sbjct: 54 ENRRAYRELLFTTDPEFAKHISGVILFHETVYQKTKDGKPFVELLRERGVLPGIKVDLGV 113
Query: 187 VPLAGSHDEVTTQGLDGLAERCAQYKKDGAQFAKWRCVLKIGPHSPSHQAMLENANVLAR 366
VPL G+ DE TTQGLD LA+RCAQY DG +FAKWRCVLKI H+PS+ AMLENANVLAR
Sbjct: 114 VPLGGTADECTTQGLDNLAQRCAQYYNDGCRFAKWRCVLKISSHNPSYLAMLENANVLAR 173
Query: 367 YASICQQNAIVPIVEPEVLPDGNHSLEEAQKVTEEVLSYVYKALADHHVYLEGTLLKPNM 546
YA ICQQN +VPIVEPEVLPDG+H LE AQ+VTE+VLS+VYKALADHHVYLEGTLLKPNM
Sbjct: 174 YAFICQQNGLVPIVEPEVLPDGDHDLETAQRVTEQVLSFVYKALADHHVYLEGTLLKPNM 233
Query: 547 VTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLNAINKYHGR 726
VT GQSCT KY++E NA ATV+ALQRTVP AV GV FLSGGQSE DAT NLNAINKY G+
Sbjct: 234 VTCGQSCTKKYSVEDNARATVEALQRTVPVAVPGVVFLSGGQSELDATRNLNAINKYPGK 293
Query: 727 KPWPLTFSFGRALQASVLEAWKERKKM*KRLKINYYIWASANGAAAVGKFDGNL 888
KPW L+FSFGRALQAS + AW+ + + K + + A ANGAA++GKF+G L
Sbjct: 294 KPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQLAKANGAASLGKFEGEL 347
>sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase
Length = 363
Score = 412 bits (1059), Expect = e-115
Identities = 209/296 (70%), Positives = 239/296 (80%)
Frame = +1
Query: 1 NVDNRRNYRHLLFSADKSLGNHISGVILYHETLYQKAEDGTPLVKLLKDRGIIPGIKVDS 180
N +NRR YR LLFSAD L +ISGVIL+ ETL+QK++DG L LL +R IIPGIKVD
Sbjct: 52 NEENRRLYRQLLFSADHKLAENISGVILFEETLHQKSDDGKTLPTLLAERNIIPGIKVDK 111
Query: 181 GVVPLAGSHDEVTTQGLDGLAERCAQYKKDGAQFAKWRCVLKIGPHSPSHQAMLENANVL 360
GVVPLAG+ +E TTQGLD LA RCA+Y + G +FAKWRCVLKI H+PS+ AMLENANVL
Sbjct: 112 GVVPLAGTDNETTTQGLDDLASRCAEYWRLGCRFAKWRCVLKISSHTPSYLAMLENANVL 171
Query: 361 ARYASICQQNAIVPIVEPEVLPDGNHSLEEAQKVTEEVLSYVYKALADHHVYLEGTLLKP 540
ARYASICQQN +VPIVEPEVLPDG+H L AQ+VTE+VL++VYKALADHHVYLEGTLLKP
Sbjct: 172 ARYASICQQNGLVPIVEPEVLPDGDHDLLTAQRVTEQVLAFVYKALADHHVYLEGTLLKP 231
Query: 541 NMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLNAINKYH 720
NMVTAGQ+C YT ++NA ATV+ALQRTVPPAV G+TFLSGGQSE DAT NLN INK
Sbjct: 232 NMVTAGQACKKAYTPQENALATVRALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIP 291
Query: 721 GRKPWPLTFSFGRALQASVLEAWKERKKM*KRLKINYYIWASANGAAAVGKFDGNL 888
G KPW LTFSFGRALQASVL WK +K+ + A ANGAAAVGKF+GN+
Sbjct: 292 GPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNM 347
>sp|P53448|ALDOC_CARAU Fructose-bisphosphate aldolase C (Brain-type aldolase)
Length = 363
Score = 395 bits (1016), Expect = e-110
Identities = 199/290 (68%), Positives = 231/290 (79%)
Frame = +1
Query: 7 DNRRNYRHLLFSADKSLGNHISGVILYHETLYQKAEDGTPLVKLLKDRGIIPGIKVDSGV 186
+NRR YR LLF+AD+ + I GVI +HETLYQKA+DGTP K++KDRGI+ GIKVD GV
Sbjct: 54 ENRRLYRQLLFTADERMDKCIGGVIFFHETLYQKADDGTPFAKMIKDRGIVVGIKVDKGV 113
Query: 187 VPLAGSHDEVTTQGLDGLAERCAQYKKDGAQFAKWRCVLKIGPHSPSHQAMLENANVLAR 366
VPLAG++ E TTQGLDGL+ERCAQYKKDGA FAKWR VLKI SPS A++ENANVLAR
Sbjct: 114 VPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRSVLKISETSPSELAIMENANVLAR 173
Query: 367 YASICQQNAIVPIVEPEVLPDGNHSLEEAQKVTEEVLSYVYKALADHHVYLEGTLLKPNM 546
YASICQQN IVPIVEPE+LPDG+H L+ Q VTE+VL+ YKAL+DHHVYLEGTLLKPNM
Sbjct: 174 YASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAACYKALSDHHVYLEGTLLKPNM 233
Query: 547 VTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLNAINKYHGR 726
VTAG SC TK++ ++ A ATV AL+RTVPPAV GVTFLSGGQSE +A+INLNAIN
Sbjct: 234 VTAGHSCPTKFSNQEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINNCPLT 293
Query: 727 KPWPLTFSFGRALQASVLEAWKERKKM*KRLKINYYIWASANGAAAVGKF 876
KPW LTFS+GRALQAS L AW+ K+ K + A ANG AA GK+
Sbjct: 294 KPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKY 343
>sp|P07764|ALF_DROME Fructose-bisphosphate aldolase
Length = 361
Score = 391 bits (1005), Expect = e-108
Identities = 204/290 (70%), Positives = 231/290 (79%)
Frame = +1
Query: 7 DNRRNYRHLLFSADKSLGNHISGVILYHETLYQKAEDGTPLVKLLKDRGIIPGIKVDSGV 186
DNRR YR LLFS D L +ISGVIL+HETLYQKA+DGTP ++LK +GII GIKVD GV
Sbjct: 54 DNRRAYRQLLFSTDPKLAENISGVILFHETLYQKADDGTPFAEILKKKGIILGIKVDKGV 113
Query: 187 VPLAGSHDEVTTQGLDGLAERCAQYKKDGAQFAKWRCVLKIGPHSPSHQAMLENANVLAR 366
VPL GS DEVTTQGLD LA RCAQYKKDG FAKWRCVLKIG ++PS+Q++LENANVLAR
Sbjct: 114 VPLFGSEDEVTTQGLDDLAARCAQYKKDGCDFAKWRCVLKIGKNTPSYQSILENANVLAR 173
Query: 367 YASICQQNAIVPIVEPEVLPDGNHSLEEAQKVTEEVLSYVYKALADHHVYLEGTLLKPNM 546
YASICQ IVPIVEPEVLPDG+H L+ AQKVTE VL+ VYKAL+DHHVYLEGTLLKPNM
Sbjct: 174 YASICQSQRIVPIVEPEVLPDGDHDLDRAQKVTETVLAAVYKALSDHHVYLEGTLLKPNM 233
Query: 547 VTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLNAINKYHGR 726
VTAGQS K T E+ A ATV+AL+RTVP AV GVTFLSGGQSE +AT+NL+AIN
Sbjct: 234 VTAGQS-AKKNTPEEIALATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLI 292
Query: 727 KPWPLTFSFGRALQASVLEAWKERKKM*KRLKINYYIWASANGAAAVGKF 876
+PW LTFS+GRALQASVL AW +K+ + A ANG AA GK+
Sbjct: 293 RPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKY 342
>sp|P00883|ALDOA_RABIT Fructose-bisphosphate aldolase A (Muscle-type aldolase)
Length = 364
Score = 391 bits (1004), Expect = e-108
Identities = 196/290 (67%), Positives = 231/290 (79%)
Frame = +1
Query: 7 DNRRNYRHLLFSADKSLGNHISGVILYHETLYQKAEDGTPLVKLLKDRGIIPGIKVDSGV 186
+NRR YR LL +AD + I GVIL+HETLYQKA+DG P +++K +G + GIKVD GV
Sbjct: 54 ENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGV 113
Query: 187 VPLAGSHDEVTTQGLDGLAERCAQYKKDGAQFAKWRCVLKIGPHSPSHQAMLENANVLAR 366
VPLAG++ E TTQGLDGL+ERCAQYKKDGA FAKWRCVLKIG H+PS A++ENANVLAR
Sbjct: 114 VPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLAR 173
Query: 367 YASICQQNAIVPIVEPEVLPDGNHSLEEAQKVTEEVLSYVYKALADHHVYLEGTLLKPNM 546
YASICQQN IVPIVEPE+LPDG+H L+ Q VTE+VL+ VYKAL+DHH+YLEGTLLKPNM
Sbjct: 174 YASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNM 233
Query: 547 VTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLNAINKYHGR 726
VT G +CT KY+ E+ A ATV AL+RTVPPAV GVTFLSGGQSE +A+INLNAINK
Sbjct: 234 VTPGHACTQKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLL 293
Query: 727 KPWPLTFSFGRALQASVLEAWKERKKM*KRLKINYYIWASANGAAAVGKF 876
KPW LTFS+GRALQAS L+AW +K+ K + Y A AN A GK+
Sbjct: 294 KPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKY 343
>sp|P05064|ALDOA_MOUSE Fructose-bisphosphate aldolase A (Muscle-type aldolase) (Aldolase
1)
Length = 364
Score = 390 bits (1001), Expect = e-108
Identities = 196/290 (67%), Positives = 231/290 (79%)
Frame = +1
Query: 7 DNRRNYRHLLFSADKSLGNHISGVILYHETLYQKAEDGTPLVKLLKDRGIIPGIKVDSGV 186
+NRR YR LL +AD + I GVIL+HETLYQKA+DG P +++K +G + GIKVD GV
Sbjct: 54 ENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGV 113
Query: 187 VPLAGSHDEVTTQGLDGLAERCAQYKKDGAQFAKWRCVLKIGPHSPSHQAMLENANVLAR 366
VPLAG++ E TTQGLDGL+ERCAQYKKDGA FAKWRCVLKIG H+PS A++ENANVLAR
Sbjct: 114 VPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLAR 173
Query: 367 YASICQQNAIVPIVEPEVLPDGNHSLEEAQKVTEEVLSYVYKALADHHVYLEGTLLKPNM 546
YASICQQN IVPIVEPE+LPDG+H L+ Q VTE+VL+ VYKAL+DHHVYLEGTLLKPNM
Sbjct: 174 YASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNM 233
Query: 547 VTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLNAINKYHGR 726
VT G +CT K++ E+ A ATV AL+RTVPPAV GVTFLSGGQSE +A+INLNAINK
Sbjct: 234 VTPGHACTQKFSNEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLL 293
Query: 727 KPWPLTFSFGRALQASVLEAWKERKKM*KRLKINYYIWASANGAAAVGKF 876
KPW LTFS+GRALQAS L+AW +K+ K + Y A AN A GK+
Sbjct: 294 KPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKY 343
>sp|P05065|ALDOA_RAT Fructose-bisphosphate aldolase A (Muscle-type aldolase)
Length = 364
Score = 390 bits (1001), Expect = e-108
Identities = 196/290 (67%), Positives = 231/290 (79%)
Frame = +1
Query: 7 DNRRNYRHLLFSADKSLGNHISGVILYHETLYQKAEDGTPLVKLLKDRGIIPGIKVDSGV 186
+NRR YR LL +AD + I GVIL+HETLYQKA+DG P +++K +G + GIKVD GV
Sbjct: 54 ENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGV 113
Query: 187 VPLAGSHDEVTTQGLDGLAERCAQYKKDGAQFAKWRCVLKIGPHSPSHQAMLENANVLAR 366
VPLAG++ E TTQGLDGL+ERCAQYKKDGA FAKWRCVLKIG H+PS A++ENANVLAR
Sbjct: 114 VPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSSLAIMENANVLAR 173
Query: 367 YASICQQNAIVPIVEPEVLPDGNHSLEEAQKVTEEVLSYVYKALADHHVYLEGTLLKPNM 546
YASICQQN IVPIVEPE+LPDG+H L+ Q VTE+VL+ VYKAL+DHHVYLEGTLLKPNM
Sbjct: 174 YASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNM 233
Query: 547 VTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLNAINKYHGR 726
VT G +CT K++ E+ A ATV AL+RTVPPAV GVTFLSGGQSE +A+INLNAINK
Sbjct: 234 VTPGHACTQKFSNEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINKCPLL 293
Query: 727 KPWPLTFSFGRALQASVLEAWKERKKM*KRLKINYYIWASANGAAAVGKF 876
KPW LTFS+GRALQAS L+AW +K+ K + Y A AN A GK+
Sbjct: 294 KPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKY 343
>sp|P04075|ALDOA_HUMAN Fructose-bisphosphate aldolase A (Muscle-type aldolase) (Lung
cancer antigen NY-LU-1)
Length = 364
Score = 389 bits (999), Expect = e-108
Identities = 194/290 (66%), Positives = 231/290 (79%)
Frame = +1
Query: 7 DNRRNYRHLLFSADKSLGNHISGVILYHETLYQKAEDGTPLVKLLKDRGIIPGIKVDSGV 186
+NRR YR LL +AD + I GVIL+HETLYQKA+DG P +++K +G + GIKVD GV
Sbjct: 54 ENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGV 113
Query: 187 VPLAGSHDEVTTQGLDGLAERCAQYKKDGAQFAKWRCVLKIGPHSPSHQAMLENANVLAR 366
VPLAG++ E TTQGLDGL+ERCAQYKKDGA FAKWRCVLKIG H+PS A++ENANVLAR
Sbjct: 114 VPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLAR 173
Query: 367 YASICQQNAIVPIVEPEVLPDGNHSLEEAQKVTEEVLSYVYKALADHHVYLEGTLLKPNM 546
YASICQQN IVPIVEPE+LPDG+H L+ Q VTE+VL+ VYKAL+DHH+YLEGTLLKPNM
Sbjct: 174 YASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNM 233
Query: 547 VTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLNAINKYHGR 726
VT G +CT K++ E+ A ATV AL+RTVPPAV G+TFLSGGQSE +A+INLNAINK
Sbjct: 234 VTPGHACTQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLL 293
Query: 727 KPWPLTFSFGRALQASVLEAWKERKKM*KRLKINYYIWASANGAAAVGKF 876
KPW LTFS+GRALQAS L+AW +K+ K + Y A AN A GK+
Sbjct: 294 KPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKY 343
>sp|Q9GKW3|ALDOC_MACFA Fructose-bisphosphate aldolase C (Brain-type aldolase)
Length = 364
Score = 385 bits (988), Expect = e-106
Identities = 192/293 (65%), Positives = 229/293 (78%)
Frame = +1
Query: 7 DNRRNYRHLLFSADKSLGNHISGVILYHETLYQKAEDGTPLVKLLKDRGIIPGIKVDSGV 186
+NRR YR +LFSAD + I GVI +HETLYQK ++G P V+ ++D+GI+ GIKVD GV
Sbjct: 54 ENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQDKGIVVGIKVDKGV 113
Query: 187 VPLAGSHDEVTTQGLDGLAERCAQYKKDGAQFAKWRCVLKIGPHSPSHQAMLENANVLAR 366
VPLAG+ E TTQGLDGL+ERCAQYKKDGA FAKWRCVLKI +PS A+LENANVLAR
Sbjct: 114 VPLAGTDGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKISERTPSALAILENANVLAR 173
Query: 367 YASICQQNAIVPIVEPEVLPDGNHSLEEAQKVTEEVLSYVYKALADHHVYLEGTLLKPNM 546
YASICQQN IVPIVEPE+LPDG+H L+ Q VTE+VL+ VYKAL+DHHVYLEGTLLKPNM
Sbjct: 174 YASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNM 233
Query: 547 VTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLNAINKYHGR 726
VT G +C KYT E+ A ATV AL+RTVPPAV GVTFLSGGQSE +A++NLNAIN+
Sbjct: 234 VTPGHACPIKYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLP 293
Query: 727 KPWPLTFSFGRALQASVLEAWKERKKM*KRLKINYYIWASANGAAAVGKFDGN 885
+PW LTFS+GRALQAS L AW+ ++ + A NG AA GK++G+
Sbjct: 294 RPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGS 346
>sp|P09972|ALDOC_HUMAN Fructose-bisphosphate aldolase C (Brain-type aldolase)
Length = 364
Score = 384 bits (986), Expect = e-106
Identities = 192/293 (65%), Positives = 228/293 (77%)
Frame = +1
Query: 7 DNRRNYRHLLFSADKSLGNHISGVILYHETLYQKAEDGTPLVKLLKDRGIIPGIKVDSGV 186
+NRR YR +LFSAD + I GVI +HETLYQK ++G P V+ ++D+GI+ GIKVD GV
Sbjct: 54 ENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQDKGIVVGIKVDKGV 113
Query: 187 VPLAGSHDEVTTQGLDGLAERCAQYKKDGAQFAKWRCVLKIGPHSPSHQAMLENANVLAR 366
VPLAG+ E TTQGLDGL+ERCAQYKKDGA FAKWRCVLKI +PS A+LENANVLAR
Sbjct: 114 VPLAGTDGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKISERTPSALAILENANVLAR 173
Query: 367 YASICQQNAIVPIVEPEVLPDGNHSLEEAQKVTEEVLSYVYKALADHHVYLEGTLLKPNM 546
YASICQQN IVPIVEPE+LPDG+H L+ Q VTE+VL+ VYKAL+DHHVYLEGTLLKPNM
Sbjct: 174 YASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNM 233
Query: 547 VTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLNAINKYHGR 726
VT G +C KYT E+ A ATV AL+RTVPPAV GVTFLSGGQSE +A+ NLNAIN+
Sbjct: 234 VTPGHACPIKYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLP 293
Query: 727 KPWPLTFSFGRALQASVLEAWKERKKM*KRLKINYYIWASANGAAAVGKFDGN 885
+PW LTFS+GRALQAS L AW+ ++ + A NG AA GK++G+
Sbjct: 294 RPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGS 346
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,236,681
Number of Sequences: 369166
Number of extensions: 2289237
Number of successful extensions: 6127
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6061
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8886314050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)