Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_004_J24
(850 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial... 417 e-116
sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial... 413 e-115
sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial p... 413 e-115
sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial... 413 e-115
sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial... 410 e-114
sp|O93344|AL1A2_CHICK Retinal dehydrogenase 2 (RalDH2) (RAL... 404 e-112
sp|O94788|AL1A2_HUMAN Retinal dehydrogenase 2 (RalDH2) (RAL... 401 e-111
sp|P12762|ALDH2_HORSE Aldehyde dehydrogenase, mitochondrial... 400 e-111
sp|Q63639|AL1A2_RAT Retinal dehydrogenase 2 (RalDH2) (RALDH... 400 e-111
sp|Q62148|AL1A2_MOUSE Retinal dehydrogenase 2 (RalDH2) (RAL... 400 e-111
>sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2)
(ALDHI) (ALDH-E2)
Length = 517
Score = 417 bits (1073), Expect = e-116
Identities = 195/283 (68%), Positives = 231/283 (81%), Gaps = 1/283 (0%)
Frame = +3
Query: 3 YAGWADKNHGKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVM 182
YAGWADK HGK IP+ G++ +TRHE VG+CGQIIPWNFPLLMQAWKLGPAL GN VVM
Sbjct: 149 YAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVM 208
Query: 183 KTAEQTPLTANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGR 362
K AEQTPLTA YVA+LI EAGFPPGVVNIVPG GP AGAA+ SH +VDK+AFTGSTE+GR
Sbjct: 209 KVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGR 268
Query: 363 IISSECNKNNIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVE 542
+I +N+KR+TLELGGKSPNI+++DAD D AV+ +HFALFFN GQCCCAGSR +V+
Sbjct: 269 VIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQ 328
Query: 543 EKIYDKFVEAMVAEAKTKIVGNPFDD-VDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGG 719
E IYD+FVE VA AK+++VGNPFD +QGPQVD+ Q KI+ IN+GK EGA+L GG
Sbjct: 329 EDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGG 388
Query: 720 KQLGDKGYFVEPTIFSKVNDNMRIAKEEIFGPVMQIMKFKNID 848
D+GYF++PT+F V D M IAKEEIFGPVMQI+KFK I+
Sbjct: 389 GIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 431
>sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2)
(AHD-M1) (ALDHI) (ALDH-E2)
Length = 519
Score = 413 bits (1062), Expect = e-115
Identities = 193/283 (68%), Positives = 228/283 (80%), Gaps = 1/283 (0%)
Frame = +3
Query: 3 YAGWADKNHGKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVM 182
YAGWADK HGK IP+ G++ +TRHE VG+CGQIIPWNFPLLMQAWKLGPAL GN VVM
Sbjct: 151 YAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVM 210
Query: 183 KTAEQTPLTANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGR 362
K AEQTPLTA YVA+LI EAGFPPGVVNIVPG GP AGAA+ SH VDK+AFTGSTEVG
Sbjct: 211 KVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVDKVAFTGSTEVGH 270
Query: 363 IISSECNKNNIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVE 542
+I +N+KR+TLELGGKSPNI+++DAD D AV+ +HFALFFN GQCCCAGSR +V+
Sbjct: 271 LIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQ 330
Query: 543 EKIYDKFVEAMVAEAKTKIVGNPFDD-VDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGG 719
E +YD+FVE VA AK+++VGNPFD +QGPQVD+ Q KI+ I SG+ EGA+L GG
Sbjct: 331 ENVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGG 390
Query: 720 KQLGDKGYFVEPTIFSKVNDNMRIAKEEIFGPVMQIMKFKNID 848
D+GYF++PT+F V D M IAKEEIFGPVMQI+KFK I+
Sbjct: 391 GAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIE 433
>sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2)
(ALDH1) (ALDH-E2)
Length = 519
Score = 413 bits (1062), Expect = e-115
Identities = 193/283 (68%), Positives = 229/283 (80%), Gaps = 1/283 (0%)
Frame = +3
Query: 3 YAGWADKNHGKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVM 182
YAGWADK HGK IP+ G++ +TRHE VG+CGQIIPWNFPLLMQAWKLGPAL GN VVM
Sbjct: 151 YAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVM 210
Query: 183 KTAEQTPLTANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGR 362
K AEQTPLTA YVA+LI EAGFPPGVVNIVPG GP AGAA+ SH +VDK+AFTGSTEVG
Sbjct: 211 KVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGH 270
Query: 363 IISSECNKNNIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVE 542
+I +N+KR+TLELGGKSPNI+++DAD D AV+ +HFALFFN GQCCCAGSR +V+
Sbjct: 271 LIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQ 330
Query: 543 EKIYDKFVEAMVAEAKTKIVGNPFDD-VDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGG 719
E +YD+FVE VA AK+++VGNPFD +QGPQVD+ Q KI+ I SG+ EGA+L GG
Sbjct: 331 EDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGG 390
Query: 720 KQLGDKGYFVEPTIFSKVNDNMRIAKEEIFGPVMQIMKFKNID 848
D+GYF++PT+F V D M IAKEEIFGPVMQI+KFK I+
Sbjct: 391 GAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIE 433
>sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial (ALDH class 2) (ALDH1)
(ALDH-E2)
Length = 500
Score = 413 bits (1062), Expect = e-115
Identities = 193/283 (68%), Positives = 229/283 (80%), Gaps = 1/283 (0%)
Frame = +3
Query: 3 YAGWADKNHGKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVM 182
YAGWADK HGK IP+ G++ +TRHE VG+CGQIIPWNFPLLMQAWKLGPAL GN VVM
Sbjct: 132 YAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVM 191
Query: 183 KTAEQTPLTANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGR 362
K AEQTPLTA YVA+LI EAGFPPGVVNIVPG GP AGAA+ SH +VDK+AFTGSTEVG
Sbjct: 192 KVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGH 251
Query: 363 IISSECNKNNIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVE 542
+I +N+KR+TLELGGKSPNI+++DAD D AV+ +HFALFFN GQCCCAGSR +V+
Sbjct: 252 LIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQ 311
Query: 543 EKIYDKFVEAMVAEAKTKIVGNPFDD-VDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGG 719
E +YD+FVE VA AK+++VGNPFD +QGPQVD+ Q KI+ I SG+ EGA+L GG
Sbjct: 312 EDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGG 371
Query: 720 KQLGDKGYFVEPTIFSKVNDNMRIAKEEIFGPVMQIMKFKNID 848
D+GYF++PT+F V D M IAKEEIFGPVMQI+KFK I+
Sbjct: 372 GAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIE 414
>sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2)
(ALDHI) (ALDH-E2)
Length = 520
Score = 410 bits (1053), Expect = e-114
Identities = 189/283 (66%), Positives = 229/283 (80%), Gaps = 1/283 (0%)
Frame = +3
Query: 3 YAGWADKNHGKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVM 182
YAGWADK HGK IP+ G+Y +TRHE VG+CGQIIPWNFPLLMQAWKLGPAL GN VVM
Sbjct: 152 YAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVM 211
Query: 183 KTAEQTPLTANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGR 362
K AEQTPLTA YVA+LI EAGFPPGVVN++PG GP AGAA+ SH +VDK+AFTGSTEVG
Sbjct: 212 KVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGH 271
Query: 363 IISSECNKNNIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVE 542
+I K+N+KR+TLE+GGKSPNI+++DAD D AV+ +HFALFFN GQCCCAGSR +V+
Sbjct: 272 LIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQ 331
Query: 543 EKIYDKFVEAMVAEAKTKIVGNPFDD-VDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGG 719
E IY +FVE VA AK+++VGNPFD +QGPQVD+ Q K++ I SGK EG +L GG
Sbjct: 332 EDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGG 391
Query: 720 KQLGDKGYFVEPTIFSKVNDNMRIAKEEIFGPVMQIMKFKNID 848
D+GYF++PT+F + D M IAKEEIFGPVMQI+KFK+++
Sbjct: 392 GAAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSME 434
>sp|O93344|AL1A2_CHICK Retinal dehydrogenase 2 (RalDH2) (RALDH 2) (RALDH(II))
(Retinaldehyde-specific dehydrogenase type 2) (Aldehyde
dehydrogenase family 1 member A2)
Length = 499
Score = 404 bits (1037), Expect = e-112
Identities = 187/283 (66%), Positives = 230/283 (81%), Gaps = 1/283 (0%)
Frame = +3
Query: 3 YAGWADKNHGKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVM 182
YAGWADK HG IP+ G+Y FTRHE +G+CGQIIPWNFPLLM AWK+ PALC GNTVV+
Sbjct: 131 YAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVI 190
Query: 183 KTAEQTPLTANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGR 362
K AEQTPL+A Y+ +LI EAGFPPGVVNI+PG GP+ GAA+ SH +DKIAFTGSTEVG+
Sbjct: 191 KPAEQTPLSALYMGALIKEAGFPPGVVNILPGFGPIVGAAIASHVGIDKIAFTGSTEVGK 250
Query: 363 IISSECNKNNIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVE 542
+I ++N+KR+TLELGGKSPNI+ ADAD D+AV+ +H +FFN GQCC AGSRIYVE
Sbjct: 251 LIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIYVE 310
Query: 543 EKIYDKFVEAMVAEAKTKIVGNPFD-DVDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGG 719
E IY++FV V AK ++VG+PFD +QGPQ+DK Q NKI++LI SG +EGA+L GG
Sbjct: 311 ESIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELIQSGITEGAKLECGG 370
Query: 720 KQLGDKGYFVEPTIFSKVNDNMRIAKEEIFGPVMQIMKFKNID 848
K LG KG+F+EPT+FS V D+MRIAKEEIFGPV +I++FK +D
Sbjct: 371 KGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTVD 413
>sp|O94788|AL1A2_HUMAN Retinal dehydrogenase 2 (RalDH2) (RALDH 2) (RALDH(II))
(Retinaldehyde-specific dehydrogenase type 2) (Aldehyde
dehydrogenase family 1 member A2)
Length = 499
Score = 401 bits (1031), Expect = e-111
Identities = 187/283 (66%), Positives = 230/283 (81%), Gaps = 1/283 (0%)
Frame = +3
Query: 3 YAGWADKNHGKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVM 182
YAGWADK HG IP+ G+Y FTRHE +G+CGQIIPWNFPLLM AWK+ PALC GNTVV+
Sbjct: 131 YAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVI 190
Query: 183 KTAEQTPLTANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGR 362
K AEQTPL+A Y+ +LI EAGFPPGV+NI+PG GP AGAA+ SH +DKIAFTGSTEVG+
Sbjct: 191 KPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIGIDKIAFTGSTEVGK 250
Query: 363 IISSECNKNNIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVE 542
+I ++N+KR+TLELGGKSPNI+ ADAD D+AV+ +H +FFN GQCC AGSRI+VE
Sbjct: 251 LIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVE 310
Query: 543 EKIYDKFVEAMVAEAKTKIVGNPFD-DVDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGG 719
E IY++FV V AK +IVG+PFD +QGPQ+DK Q NKI++LI SG +EGA+L GG
Sbjct: 311 ESIYEEFVRRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGG 370
Query: 720 KQLGDKGYFVEPTIFSKVNDNMRIAKEEIFGPVMQIMKFKNID 848
K LG KG+F+EPT+FS V D+MRIAKEEIFGPV +I++FK +D
Sbjct: 371 KGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMD 413
>sp|P12762|ALDH2_HORSE Aldehyde dehydrogenase, mitochondrial (ALDH class 2) (ALDHI)
(ALDH-E2)
Length = 500
Score = 400 bits (1029), Expect = e-111
Identities = 188/283 (66%), Positives = 227/283 (80%), Gaps = 1/283 (0%)
Frame = +3
Query: 3 YAGWADKNHGKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVM 182
YAGWADK HGK IP+ G++ +TRHE VG+CGQIIPWNFPLLMQA KLGPAL GN VVM
Sbjct: 132 YAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAAKLGPALATGNVVVM 191
Query: 183 KTAEQTPLTANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGR 362
K AEQTPLTA YVA+L EAGFPPGVVN+VPG GP AGAA+ SH +VDK+AFTGSTEVG
Sbjct: 192 KVAEQTPLTALYVANLTKEAGFPPGVVNVVPGFGPTAGAAIASHEDVDKVAFTGSTEVGH 251
Query: 363 IISSECNKNNIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVE 542
+I ++N+K++TLELGGKSPNI+++DAD D AV+ +HFALFFN GQCC AGSR +V+
Sbjct: 252 LIQVAAGRSNLKKVTLELGGKSPNIIVSDADMDWAVEQAHFALFFNQGQCCGAGSRTFVQ 311
Query: 543 EKIYDKFVEAMVAEAKTKIVGNPFD-DVDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGG 719
E +Y +FVE VA AK+++VGNPFD +QGPQVD+ Q NK++ I SGK EGA+L GG
Sbjct: 312 EDVYAEFVERSVARAKSRVVGNPFDSQTEQGPQVDETQFNKVLGYIKSGKEEGAKLLCGG 371
Query: 720 KQLGDKGYFVEPTIFSKVNDNMRIAKEEIFGPVMQIMKFKNID 848
D+GYF++PT+F V D M IAKEEIFGPVMQI+KFK I+
Sbjct: 372 GAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 414
>sp|Q63639|AL1A2_RAT Retinal dehydrogenase 2 (RalDH2) (RALDH 2) (RALDH(II))
(Retinaldehyde-specific dehydrogenase type 2) (Aldehyde
dehydrogenase family 1 member A2)
Length = 499
Score = 400 bits (1029), Expect = e-111
Identities = 187/283 (66%), Positives = 230/283 (81%), Gaps = 1/283 (0%)
Frame = +3
Query: 3 YAGWADKNHGKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVM 182
YAGWADK HG IP+ G+Y FTRHE +G+CGQIIPWNFPLLM WK+ PALC GNTVV+
Sbjct: 131 YAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVI 190
Query: 183 KTAEQTPLTANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGR 362
K AEQTPL+A Y+ +LI EAGFPPGVVNI+PG GP AGAA+ SH +DKIAFTGSTEVG+
Sbjct: 191 KPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGK 250
Query: 363 IISSECNKNNIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVE 542
+I ++N+KR+TLELGGKSPNI+ ADAD D+AV+ +H +FFN GQCC AGSRI+VE
Sbjct: 251 LIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVE 310
Query: 543 EKIYDKFVEAMVAEAKTKIVGNPFD-DVDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGG 719
E IY++FV+ V AK +IVG+PFD +QGPQ+DK Q NKI++LI SG +EGA+L GG
Sbjct: 311 ESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGG 370
Query: 720 KQLGDKGYFVEPTIFSKVNDNMRIAKEEIFGPVMQIMKFKNID 848
K LG KG+F+EPT+FS V D+MRIAKEEIFGPV +I++FK +D
Sbjct: 371 KGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMD 413
>sp|Q62148|AL1A2_MOUSE Retinal dehydrogenase 2 (RalDH2) (RALDH 2) (RALDH(II))
(Retinaldehyde-specific dehydrogenase type 2) (Aldehyde
dehydrogenase family 1 member A2)
Length = 499
Score = 400 bits (1028), Expect = e-111
Identities = 186/283 (65%), Positives = 230/283 (81%), Gaps = 1/283 (0%)
Frame = +3
Query: 3 YAGWADKNHGKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVM 182
YAGWADK HG IP+ G+Y FTRHE +G+CGQIIPWNFPLLM WK+ PALC GNTVV+
Sbjct: 131 YAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVI 190
Query: 183 KTAEQTPLTANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGR 362
K AEQTPL+A Y+ +LI EAGFPPGVVNI+PG GP AGAA+ SH +DKIAFTGSTEVG+
Sbjct: 191 KPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGK 250
Query: 363 IISSECNKNNIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVE 542
+I ++N+KR+TLELGGKSPNI+ ADAD D+AV+ +H +FFN GQCC AGSRI+VE
Sbjct: 251 LIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVE 310
Query: 543 EKIYDKFVEAMVAEAKTKIVGNPFD-DVDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGG 719
E IY++FV+ V AK +IVG+PFD +QGPQ+DK Q NK+++LI SG +EGA+L GG
Sbjct: 311 ESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKVLELIQSGVAEGAKLECGG 370
Query: 720 KQLGDKGYFVEPTIFSKVNDNMRIAKEEIFGPVMQIMKFKNID 848
K LG KG+F+EPT+FS V D+MRIAKEEIFGPV +I++FK +D
Sbjct: 371 KGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMD 413
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,189,463
Number of Sequences: 369166
Number of extensions: 1972921
Number of successful extensions: 5876
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5439
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8341863645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)