Planarian EST Database


Dr_sW_004_J04

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_004_J04
         (591 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9GP32|ALF_ECHMU  Fructose-bisphosphate aldolase               251   7e-67
sp|P53442|ALF_SCHMA  Fructose-bisphosphate aldolase               250   2e-66
sp|P53445|ALF1_LAMJA  Fructose-bisphosphate aldolase, muscle...   209   5e-54
sp|P53448|ALDOC_CARAU  Fructose-bisphosphate aldolase C (Bra...   209   5e-54
sp|P00883|ALDOA_RABIT  Fructose-bisphosphate aldolase A (Mus...   207   2e-53
sp|P05064|ALDOA_MOUSE  Fructose-bisphosphate aldolase A (Mus...   206   3e-53
sp|P05065|ALDOA_RAT  Fructose-bisphosphate aldolase A (Muscl...   206   4e-53
sp|P04075|ALDOA_HUMAN  Fructose-bisphosphate aldolase A (Mus...   205   6e-53
sp|P09117|ALDOC_RAT  Fructose-bisphosphate aldolase C (Brain...   203   2e-52
sp|P46563|ALF2_CAEEL  Fructose-bisphosphate aldolase 2 (Aldo...   203   3e-52
>sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase
          Length = 363

 Score =  251 bits (642), Expect = 7e-67
 Identities = 125/159 (78%), Positives = 138/159 (86%)
 Frame = +2

Query: 2   VTEEVLSYVYKALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPA 181
           VTE+VLS+VYKALADHHVYLEGTLLKPNMVT GQSCT KY++E NA ATV+ALQRTVP A
Sbjct: 205 VTEQVLSFVYKALADHHVYLEGTLLKPNMVTCGQSCTKKYSVEDNARATVEALQRTVPVA 264

Query: 182 VAGVTFLSGGQSESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAA 361
           V GV FLSGGQSE DAT NLNAINKY G+KPW L+FSFGRALQAS + AW+GK ENVKA 
Sbjct: 265 VPGVVFLSGGQSELDATRNLNAINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAG 324

Query: 362 QDQLLHLASANGAAAVGKFDGNLKTAAGGKSLFVANHAY 478
           Q + L LA ANGAA++GKF+G LKTAAG KSLFVANHAY
Sbjct: 325 QAEFLQLAKANGAASLGKFEGELKTAAGQKSLFVANHAY 363
>sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase
          Length = 363

 Score =  250 bits (638), Expect = 2e-66
 Identities = 125/159 (78%), Positives = 137/159 (86%)
 Frame = +2

Query: 2   VTEEVLSYVYKALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPA 181
           VTE+VL++VYKALADHHVYLEGTLLKPNMVTAGQ+C   YT ++NA ATV+ALQRTVPPA
Sbjct: 205 VTEQVLAFVYKALADHHVYLEGTLLKPNMVTAGQACKKAYTPQENALATVRALQRTVPPA 264

Query: 182 VAGVTFLSGGQSESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAA 361
           V G+TFLSGGQSE DAT NLN INK  G KPW LTFSFGRALQASVL  WKGKKENV AA
Sbjct: 265 VPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAA 324

Query: 362 QDQLLHLASANGAAAVGKFDGNLKTAAGGKSLFVANHAY 478
           Q++LL LA ANGAAAVGKF+GN+ T  G KSLFVANHAY
Sbjct: 325 QEELLKLAKANGAAAVGKFEGNMGTTLGDKSLFVANHAY 363
>sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle type
          Length = 363

 Score =  209 bits (531), Expect = 5e-54
 Identities = 106/159 (66%), Positives = 125/159 (78%)
 Frame = +2

Query: 2   VTEEVLSYVYKALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPA 181
           +TE+VL+  YKAL+DHHVYLEGTLLKPNMVT G +       EQ A AT+ AL+RTVPPA
Sbjct: 205 ITEKVLAATYKALSDHHVYLEGTLLKPNMVTVGTAAPASTRPEQVAMATLTALRRTVPPA 264

Query: 182 VAGVTFLSGGQSESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAA 361
           V G+TFLSGGQSE DA+I+LNAINK H  KPW LTFS+GRALQASVL+AW GKKEN+KAA
Sbjct: 265 VPGITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAA 324

Query: 362 QDQLLHLASANGAAAVGKFDGNLKTAAGGKSLFVANHAY 478
           QD+L+  A  NG A+ G++      AA G+SLFVANHAY
Sbjct: 325 QDELMRRAKINGQASKGEYKPTGTGAAAGESLFVANHAY 363
>sp|P53448|ALDOC_CARAU Fructose-bisphosphate aldolase C (Brain-type aldolase)
          Length = 363

 Score =  209 bits (531), Expect = 5e-54
 Identities = 106/159 (66%), Positives = 125/159 (78%)
 Frame = +2

Query: 2   VTEEVLSYVYKALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPA 181
           VTE+VL+  YKAL+DHHVYLEGTLLKPNMVTAG SC TK++ ++ A ATV AL+RTVPPA
Sbjct: 205 VTEKVLAACYKALSDHHVYLEGTLLKPNMVTAGHSCPTKFSNQEIAMATVTALRRTVPPA 264

Query: 182 VAGVTFLSGGQSESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAA 361
           V GVTFLSGGQSE +A+INLNAIN     KPW LTFS+GRALQAS L AW+G KEN KAA
Sbjct: 265 VTGVTFLSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAA 324

Query: 362 QDQLLHLASANGAAAVGKFDGNLKTAAGGKSLFVANHAY 478
            ++ L  A ANG AA GK+  +    + G+SL+VANHAY
Sbjct: 325 TEEFLKRAEANGLAAQGKYVSSGMDGSAGQSLYVANHAY 363
>sp|P00883|ALDOA_RABIT Fructose-bisphosphate aldolase A (Muscle-type aldolase)
          Length = 364

 Score =  207 bits (526), Expect = 2e-53
 Identities = 106/160 (66%), Positives = 128/160 (80%), Gaps = 1/160 (0%)
 Frame = +2

Query: 2   VTEEVLSYVYKALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPA 181
           VTE+VL+ VYKAL+DHH+YLEGTLLKPNMVT G +CT KY+ E+ A ATV AL+RTVPPA
Sbjct: 205 VTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKYSHEEIAMATVTALRRTVPPA 264

Query: 182 VAGVTFLSGGQSESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAA 361
           V GVTFLSGGQSE +A+INLNAINK    KPW LTFS+GRALQAS L+AW GKKEN+KAA
Sbjct: 265 VTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAA 324

Query: 362 QDQLLHLASANGAAAVGKFDGNLKT-AAGGKSLFVANHAY 478
           Q++ +  A AN  A  GK+  + +  AA  +SLF++NHAY
Sbjct: 325 QEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 364
>sp|P05064|ALDOA_MOUSE Fructose-bisphosphate aldolase A (Muscle-type aldolase) (Aldolase
           1)
          Length = 364

 Score =  206 bits (525), Expect = 3e-53
 Identities = 106/160 (66%), Positives = 129/160 (80%), Gaps = 1/160 (0%)
 Frame = +2

Query: 2   VTEEVLSYVYKALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPA 181
           VTE+VL+ VYKAL+DHHVYLEGTLLKPNMVT G +CT K++ E+ A ATV AL+RTVPPA
Sbjct: 205 VTEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHACTQKFSNEEIAMATVTALRRTVPPA 264

Query: 182 VAGVTFLSGGQSESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAA 361
           V GVTFLSGGQSE +A+INLNAINK    KPW LTFS+GRALQAS L+AW GKKEN+KAA
Sbjct: 265 VTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAA 324

Query: 362 QDQLLHLASANGAAAVGKFDGNLKT-AAGGKSLFVANHAY 478
           Q++ +  A AN  A  GK+  + ++ AA  +SLF++NHAY
Sbjct: 325 QEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364
>sp|P05065|ALDOA_RAT Fructose-bisphosphate aldolase A (Muscle-type aldolase)
          Length = 364

 Score =  206 bits (524), Expect = 4e-53
 Identities = 106/160 (66%), Positives = 129/160 (80%), Gaps = 1/160 (0%)
 Frame = +2

Query: 2   VTEEVLSYVYKALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPA 181
           VTE+VL+ VYKAL+DHHVYLEGTLLKPNMVT G +CT K++ E+ A ATV AL+RTVPPA
Sbjct: 205 VTEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHACTQKFSNEEIAMATVTALRRTVPPA 264

Query: 182 VAGVTFLSGGQSESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAA 361
           V GVTFLSGGQSE +A+INLNAINK    KPW LTFS+GRALQAS L+AW GKKEN+KAA
Sbjct: 265 VPGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAA 324

Query: 362 QDQLLHLASANGAAAVGKFDGNLKT-AAGGKSLFVANHAY 478
           Q++ +  A AN  A  GK+  + ++ AA  +SLF++NHAY
Sbjct: 325 QEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364
>sp|P04075|ALDOA_HUMAN Fructose-bisphosphate aldolase A (Muscle-type aldolase) (Lung
           cancer antigen NY-LU-1)
          Length = 364

 Score =  205 bits (522), Expect = 6e-53
 Identities = 105/160 (65%), Positives = 128/160 (80%), Gaps = 1/160 (0%)
 Frame = +2

Query: 2   VTEEVLSYVYKALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPA 181
           VTE+VL+ VYKAL+DHH+YLEGTLLKPNMVT G +CT K++ E+ A ATV AL+RTVPPA
Sbjct: 205 VTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKFSHEEIAMATVTALRRTVPPA 264

Query: 182 VAGVTFLSGGQSESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAA 361
           V G+TFLSGGQSE +A+INLNAINK    KPW LTFS+GRALQAS L+AW GKKEN+KAA
Sbjct: 265 VTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAA 324

Query: 362 QDQLLHLASANGAAAVGKFDGNLKT-AAGGKSLFVANHAY 478
           Q++ +  A AN  A  GK+  + +  AA  +SLFV+NHAY
Sbjct: 325 QEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364
>sp|P09117|ALDOC_RAT Fructose-bisphosphate aldolase C (Brain-type aldolase)
          Length = 363

 Score =  203 bits (517), Expect = 2e-52
 Identities = 100/159 (62%), Positives = 125/159 (78%)
 Frame = +2

Query: 2   VTEEVLSYVYKALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPA 181
           VTE+VL+ VYKAL+DHHVYLEGTLLKPNMVT G +C  KY+ E+ A ATV AL+RTVPPA
Sbjct: 205 VTEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHACPIKYSPEEIAMATVTALRRTVPPA 264

Query: 182 VAGVTFLSGGQSESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAA 361
           V GVTFLSGGQSE +A++NLNAIN+    +PW LTFS+GRALQAS L AW+G+++N  AA
Sbjct: 265 VPGVTFLSGGQSEEEASLNLNAINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAA 324

Query: 362 QDQLLHLASANGAAAVGKFDGNLKTAAGGKSLFVANHAY 478
            ++ +  A  NG AA GK++G+    A  +SL+VANHAY
Sbjct: 325 TEEFIKRAEMNGLAAQGKYEGSGDGGAAAQSLYVANHAY 363
>sp|P46563|ALF2_CAEEL Fructose-bisphosphate aldolase 2 (Aldolase CE-2) (CE2)
          Length = 366

 Score =  203 bits (516), Expect = 3e-52
 Identities = 105/159 (66%), Positives = 121/159 (76%)
 Frame = +2

Query: 2   VTEEVLSYVYKALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPA 181
           VTE+VL++VYKALADHHVYLEGTLLKPNMVT GQS  +K + E    ATV AL+R VP A
Sbjct: 208 VTEQVLAFVYKALADHHVYLEGTLLKPNMVTPGQSSASKASHEAIGLATVTALRRGVPAA 267

Query: 182 VAGVTFLSGGQSESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAA 361
           V G+TFLSGGQSE DAT NLNAIN     KPW LTFS+GRALQASVL+AW GK EN+ AA
Sbjct: 268 VPGITFLSGGQSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAA 327

Query: 362 QDQLLHLASANGAAAVGKFDGNLKTAAGGKSLFVANHAY 478
           Q  LLH + ANG A++GK+ G     A  +SLFVA H+Y
Sbjct: 328 QKTLLHRSKANGDASLGKYAGEDAAGAAAESLFVAKHSY 366
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,188,023
Number of Sequences: 369166
Number of extensions: 1522783
Number of successful extensions: 4021
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3988
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4455160255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)