Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_004_I16
(844 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P47460|HMW2_MYCGE Cytadherence high molecular weight pro... 56 1e-07
sp|P46504|YLX8_CAEEL Hypothetical protein F23F12.8 in chrom... 54 7e-07
sp|P53278|YG3A_YEAST Hypothetical 92.7 kDa protein in ASN2-... 50 8e-06
sp|Q10221|YAYE_SCHPO Hypothetical protein C4H3.14c in chrom... 50 8e-06
sp|Q07283|TRHY_HUMAN Trichohyalin 49 2e-05
sp|P08799|MYS2_DICDI Myosin II heavy chain, non muscle 49 2e-05
sp|Q02224|CENPE_HUMAN Centromeric protein E (CENP-E protein) 48 4e-05
sp|Q8R9D0|MUTS2_THETN MutS2 protein 48 4e-05
sp|P36044|MNN4_YEAST Protein MNN4 47 7e-05
sp|Q09863|YAFA_SCHPO Hypothetical protein C29E6.10c in chro... 47 9e-05
>sp|P47460|HMW2_MYCGE Cytadherence high molecular weight protein 2 (Cytadherence accessory
protein 2)
Length = 1805
Score = 55.8 bits (133), Expect = 1e-07
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 16/174 (9%)
Frame = +1
Query: 187 NNLENIKNKLSAQLKLKMDDEDLRIRNAIAEKEEKFQNDETDKE-------KKRQDTLKS 345
NN E I+ L AQL ++ E ++NA ++ F ND K +KR L++
Sbjct: 708 NNAEVIQADL-AQLNQSLNQERSELQNA-KQRIADFHNDSLKKLNEYELSLQKRLQELQT 765
Query: 346 IEDHRK-----NTMKALEEDQRLNKQRDLDSLLARK---EADAILKENEDRRQKMRLTEA 501
+E ++K N E +LN+++ L +K E DAI + D+ Q + + +A
Sbjct: 766 LEANQKQHSYQNQAYFEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDKHQALNMQQA 825
Query: 502 KKLAEEH-LATAKAIKDSDENSMMNKLKIMEENQKLLDLEESVFQEYARKVIEH 660
+ + H L A D+D+ S+ ++L ++E QKL+DLE S E R+ E+
Sbjct: 826 ELDRKTHELNNAFLNHDADQKSLQDQLATVKETQKLIDLERSALLEKQREFAEN 879
Score = 34.3 bits (77), Expect = 0.44
Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Frame = +1
Query: 181 KQNNLENIKNKLSAQLKLKMDDEDLRIRNAIAEKEEKFQN-DETDKEKKRQDTLKSIEDH 357
K N LE NKL+ ++ + D + + A K++ Q+ D T+K++K + L + ++
Sbjct: 1475 KANLLEAQANKLN----IEKNTIDFKEKELKAFKDKVDQDIDSTNKQRKELNEL--LNEN 1528
Query: 358 RKNTMKALEEDQRLNKQRDLDSLLARKEADAILKENEDRRQK-MRLTEAKKLAEEHLAT 531
+ +E ++ +N + DSLL K+ + I ++ D+ + +RL + KLAE+ T
Sbjct: 1529 KLLQQSLIERERAINSK---DSLL-NKKIETIKRQLHDKEMRVLRLVDRMKLAEQKYQT 1583
>sp|P46504|YLX8_CAEEL Hypothetical protein F23F12.8 in chromosome III precursor
Length = 887
Score = 53.5 bits (127), Expect = 7e-07
Identities = 48/250 (19%), Positives = 112/250 (44%), Gaps = 31/250 (12%)
Frame = +1
Query: 1 REERRFKMQEYMQQMDDVKKMREIDKLKNEEDDEEIR---------IFXXXXXXXXXXXX 153
++E+ KM++ + + +K RE+++ + E+ E R I+
Sbjct: 313 QQEKFEKMEQERLRQEKEEKARELERRRKLEESETARQAELDRQATIYAEQERMAMERNR 372
Query: 154 XXXXXXYDEKQNNLENIKNKLSA----------QLKLKMDDEDLRIRNAI-AEKEEKFQN 300
+EK+ E ++ + A +L+L+ ++ R+R + A ++ K Q
Sbjct: 373 ELERIRLEEKKRENERVRQEEIAMEISKIRELERLQLERQRKNERVRQELEAARKYKLQE 432
Query: 301 DETDK----EKKRQDTLKSIEDHRKNTMKALEEDQRLNKQRDLDSLLARKEADAILKENE 468
+E + +K + ++ E+ R+ ++ LEE++ +R L R+ IL++ E
Sbjct: 433 EERQRKIQQQKVEMEQIRQQEEARQEQLRVLEEERARELERVRQEELERQHQMEILRQQE 492
Query: 469 DRRQKMRLTEAKKLAEEHLATAKAIKDSDENSMMNKLKIMEENQK-------LLDLEESV 627
+ ++K +L + ++ E+ A ++ NK K++EE K + D + ++
Sbjct: 493 EDQKKKKLEKDREQREQQEAEELNRMIIEKEMKENKQKMIEEKNKRKMLEKEMEDRQNAI 552
Query: 628 FQEYARKVIE 657
++E R++ E
Sbjct: 553 YEEEERRIAE 562
Score = 41.2 bits (95), Expect = 0.004
Identities = 46/214 (21%), Positives = 97/214 (45%), Gaps = 10/214 (4%)
Frame = +1
Query: 10 RRFKMQEYMQQMDDVKKMREIDKLKNEED--DEEIRIFXXXXXXXXXXXXXXXXXXYDEK 183
R++K+QE +Q ++ E+++++ +E+ E++R+ E+
Sbjct: 426 RKYKLQEEERQRKIQQQKVEMEQIRQQEEARQEQLRVLEEERARELERVRQEEL----ER 481
Query: 184 QNNLENIKNKLSAQLKLKMD--------DEDLRIRNAIAEKEEKFQNDETDKEKKRQDTL 339
Q+ +E ++ + Q K K++ E + I EKE K + +EK ++ L
Sbjct: 482 QHQMEILRQQEEDQKKKKLEKDREQREQQEAEELNRMIIEKEMKENKQKMIEEKNKRKML 541
Query: 340 KSIEDHRKNTMKALEEDQRLNKQRDLDSLLARKEADAILKENEDRRQKMRLTEAKKLAEE 519
+ + R+N + EE + ++R RK+ E E+RR R+ + +A E
Sbjct: 542 EKEMEDRQNAIYEEEERRIAEEER-------RKQI-----EIEERR---RIQQQIMIATE 586
Query: 520 HLATAKAIKDSDENSMMNKLKIMEENQKLLDLEE 621
+ A++ E M+ ++K E+ +K L+ +E
Sbjct: 587 ERSRLDAME--REREMLRQIKESEKQRKELERQE 618
>sp|P53278|YG3A_YEAST Hypothetical 92.7 kDa protein in ASN2-PHB1 intergenic region
Length = 816
Score = 50.1 bits (118), Expect = 8e-06
Identities = 53/222 (23%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Frame = +1
Query: 19 KMQEYMQQMDDVKKMR-EIDKLKNEEDDEEIRIFXXXXXXXXXXXXXXXXXXYDEKQNNL 195
K+QE + +D ++ EID L NE+ + + +++ NL
Sbjct: 519 KLQEKNEVLDKQTNVKSEIDDLNNEKTNVQ--------------------KEFNDWTTNL 558
Query: 196 ENIKNKLSAQLKLKMDDEDLRIRNAIAEKEEKFQNDETDKEKKRQDTLKSIEDHRK---- 363
N+ +L AQ+ +I N I K+ K QN+ + EKK++D + E+++K
Sbjct: 559 SNLSQQLDAQI--------FKI-NQINLKQGKVQNEIDNLEKKKEDLVTQTEENKKLHEK 609
Query: 364 --NTMKALEEDQRLNKQRDLDSLLAR--KEADAILKENEDRRQKM-----RLTEAKKLAE 516
++++E + L + D+D+ ++ E I +EN + + ++ RL + ++ E
Sbjct: 610 NVQVLESVENKEYLPQINDIDNQISSLLNEVTIIKQENANEKTQLSAITKRLEDERRAHE 669
Query: 517 EHL-ATAKAIKDSDENSMMNKLKIMEE--NQKLLDLEESVFQ 633
E L A+ K +EN + + + +EE +Q LD E+ + Q
Sbjct: 670 EQLKLEAEERKRKEENLLEKQRQELEEQAHQAQLDHEQQITQ 711
>sp|Q10221|YAYE_SCHPO Hypothetical protein C4H3.14c in chromosome I
Length = 345
Score = 50.1 bits (118), Expect = 8e-06
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 16/217 (7%)
Frame = +1
Query: 67 EIDKLKNEEDDEEIRIFXXXXXXXXXXXXXXXXXXYDEKQNNLENIKNKLSAQLKLKMDD 246
EID+LK E D I + + +NNL N+ + L Q K +
Sbjct: 77 EIDRLKKEGDKVSILLMQERKKRKEL----------ESAKNNLLNVYDSLKMQ-KASVSS 125
Query: 247 EDLRIRNAIAEKE---EKFQNDETDKEKKRQDTLKSIEDHRKNTMKALEEDQRLNKQRDL 417
R + A E++ E+F+ TD +++Q IE T +A E ++ KQ++
Sbjct: 126 MVNRKQRAAKEEQKIQEEFERQITDLLEEQQQLKLEIERLEAETERANSETEQYEKQKEA 185
Query: 418 ----------DSLLARKEADAILKENEDRRQKMRLTEAKKLAEEHLATAKAIKDSDENSM 567
+ L + DA ++ +D +++ T K++++ +A K +KDS NS
Sbjct: 186 LEEEYEELRNECLKHDPQLDAEIRTLQDTFEEVERTLTKQVSDAKIAD-KPLKDSMFNSN 244
Query: 568 MNKLKIM---EENQKLLDLEESVFQEYARKVIEHCEK 669
K KIM E+ +K D+ Q+Y ++ EK
Sbjct: 245 SEKEKIMHALEKAEKDADIYSEFIQQYMEQLESSLEK 281
>sp|Q07283|TRHY_HUMAN Trichohyalin
Length = 1898
Score = 48.9 bits (115), Expect = 2e-05
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Frame = +1
Query: 181 KQNNLENIKNKLSAQLKLKMDDEDLRIRNAIAEKEEKFQNDETDK----------EKKRQ 330
++ LE + K + + K +E +R E+EEK + ETD+ E++ Q
Sbjct: 1253 EEEQLEREEQKEAKRRDRKSQEEKQLLRE---EREEKRRRQETDRKFREEEQLLQEREEQ 1309
Query: 331 DTLKSIED---------HRKNTMKALEEDQRLNKQRDLDSLLARKEADAILKENEDRRQK 483
L+ D H++ K LEE+QRL ++R+ L ++E L+E R++
Sbjct: 1310 PLLRQERDRKFREEELLHQEQGRKFLEEEQRLREERERKFL--KEEQQLRLEE----REQ 1363
Query: 484 MRLTEAKKLAEEHLATAKAIKDSDENSMMNKLKIMEENQKLLDLEESVFQEYARKVIE 657
+R +K EE ++ +D +++ E +K L+ E+ + QE RK E
Sbjct: 1364 LRQDRDRKFREEEQQLSRQERDRKFREEEQQVRRQERERKFLEEEQQLRQERHRKFRE 1421
Score = 47.8 bits (112), Expect = 4e-05
Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 9/224 (4%)
Frame = +1
Query: 4 EERRFKMQEYMQQM--DDVKKMREIDKLKNEEDDEEIRIFXXXXXXXXXXXXXXXXXXYD 177
EE + + QE QQ+ D +K RE ++L E +++++R D
Sbjct: 1603 EEPQLRRQEREQQLRHDRDRKFREEEQLLQEGEEQQLR-----------------RQERD 1645
Query: 178 EKQNNLENIKNKLSAQLKLKMDDEDLRIRNAIAEKEEKFQNDETDKEKKRQDTLKSIEDH 357
K E + + K +++ LR + E E KF+ +E +++ Q+ L+ E +
Sbjct: 1646 RKFREEEQQLRRQERERKFLQEEQQLRRQ----ELERKFREEEQLRQETEQEQLRRQERY 1701
Query: 358 RKNTMKALEEDQRLNKQRDLDSLLARKEADAILKENEDRRQ-------KMRLTEAKKLAE 516
RK + E+++L +R+ + L R+E D +E E RQ + + ++ K E
Sbjct: 1702 RK-----ILEEEQLRPERE-EQQLRRQERDRKFREEEQLRQGREEQQLRSQESDRKFREE 1755
Query: 517 EHLATAKAIKDSDENSMMNKLKIMEENQKLLDLEESVFQEYARK 648
E L + + K + EE +L + E+ + QE R+
Sbjct: 1756 EQLRQEREEQQLRPQQRDGKYRWEEEQLQLEEQEQRLRQERDRQ 1799
Score = 42.4 bits (98), Expect = 0.002
Identities = 43/237 (18%), Positives = 103/237 (43%), Gaps = 5/237 (2%)
Frame = +1
Query: 1 REERRFKMQEYMQQMDDVKKMREIDK--LKNEEDDEEIRIFXXXXXXXXXXXXXXXXXXY 174
R E++ + ++ +++ +++ +E ++ K+E++ E R+ +
Sbjct: 427 RREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQRL----------KREQEERRDW 476
Query: 175 DEKQNNLENIKNKLSAQLKLKMDDEDLRIRNAIAEKEEKFQNDETDKEKKRQDTLKSIED 354
+++ E + + Q + +E+ R R E+EE+ +E++ Q + E+
Sbjct: 477 LKREEETERHEQERRKQQLKRDQEEERRERWLKLEEEER----REQQERREQQLRREQEE 532
Query: 355 HRKNTMKALEEDQRLNKQRDLDSLLARKE---ADAILKENEDRRQKMRLTEAKKLAEEHL 525
R+ +K EE++RL ++ + L R++ + +LK E++R + E + E+
Sbjct: 533 RREQRLKRQEEEERLQQRLRSEQQLRREQEERLEQLLKREEEKRLEQERREQRLKREQEE 592
Query: 526 ATAKAIKDSDENSMMNKLKIMEENQKLLDLEESVFQEYARKVIEHCEKGGRNTYPLK 696
+ +K +E + + + EE + Q R+ +E E+ R LK
Sbjct: 593 RRDQLLKREEER---------RQQRLKREQEERLEQRLKREEVERLEQEERRDERLK 640
Score = 42.0 bits (97), Expect = 0.002
Identities = 38/208 (18%), Positives = 91/208 (43%), Gaps = 8/208 (3%)
Frame = +1
Query: 1 REERRFKMQEYMQQMDDVKKMR--------EIDKLKNEEDDEEIRIFXXXXXXXXXXXXX 156
++++R + Q+ + Q ++ K+ R E +KL+ EE + +
Sbjct: 226 KQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQE 285
Query: 157 XXXXXYDEKQNNLENIKNKLSAQLKLKMDDEDLRIRNAIAEKEEKFQNDETDKEKKRQDT 336
+E+Q + +L + +L+ E+ R R E+ E+ + E +E++ Q
Sbjct: 286 LRRERQEEEQQ-----QQRLRREQQLRRKQEEER-REQQEERREQQERREQQEERREQQL 339
Query: 337 LKSIEDHRKNTMKALEEDQRLNKQRDLDSLLARKEADAILKENEDRRQKMRLTEAKKLAE 516
+ E+ R+ ++ +E++R +Q + R+E ++ E+RR++ E + E
Sbjct: 340 RREQEERREQQLRREQEEERREQQLRREQEEERREQQLRREQEEERREQQLRREQQLRRE 399
Query: 517 EHLATAKAIKDSDENSMMNKLKIMEENQ 600
+ L + ++ E + + ++ E Q
Sbjct: 400 QQLRREQQLR--REQQLRREQQLRREQQ 425
Score = 41.2 bits (95), Expect = 0.004
Identities = 41/216 (18%), Positives = 92/216 (42%), Gaps = 1/216 (0%)
Frame = +1
Query: 4 EERRFKMQEYMQQMDDVKKMREIDKLKNEEDDEEIRIFXXXXXXXXXXXXXXXXXXYDEK 183
+ER+++ +E +QQ ++ E +K + +E + + R EK
Sbjct: 943 QERQYREEEQLQQEEEQLLREEREKRRRQERERQYR-----KDKKLQQKEEQLLGEEPEK 997
Query: 184 QNNLENIKNKLSAQLKLKMDDEDLRIRNAIAEKEEKFQNDETDKEKKRQDTLKSIEDHRK 363
+ E K K + +L+ ++E L + E+ EK + E +++ +++D L+ E+
Sbjct: 998 RRRQEREK-KYREEEELQQEEEQL-----LREEREKRRRQEWERQYRKKDELQQEEEQLL 1051
Query: 364 NTMKALEEDQRLNKQRDLDSLLARKEADAILKENEDRRQKMRLTEAKKLAEEHLATAKAI 543
+ Q +Q + L ++E + +E E RR++ + +K E + +
Sbjct: 1052 REEREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLL 1111
Query: 544 KDSDE-NSMMNKLKIMEENQKLLDLEESVFQEYARK 648
++ E + + E ++L EE + +E K
Sbjct: 1112 REEPEKRRRQERERQCREEEELQQEEEQLLREEREK 1147
Score = 41.2 bits (95), Expect = 0.004
Identities = 43/213 (20%), Positives = 91/213 (42%), Gaps = 7/213 (3%)
Frame = +1
Query: 4 EERRFKMQEYMQQMDDVKKMREIDKLKNEEDDEEIRIFXXXXXXXXXXXXXXXXXXYDEK 183
++ R + +E ++Q D K E +L +E D + R +E+
Sbjct: 1354 QQLRLEEREQLRQDRDRKFREEEQQLSRQERDRKFR-----EEEQQVRRQERERKFLEEE 1408
Query: 184 QNNLENIKNKLSAQLKLKMDDEDLRIRNA-----IAEKEEKFQNDETDKEKKRQDTLKSI 348
Q + K + +L + E+ ++ E+E++ + E D+ K R+ L+S
Sbjct: 1409 QQLRQERHRKFREEEQLLQEREEQQLHRQERDRKFLEEEQQLRRQERDR-KFREQELRSQ 1467
Query: 349 EDHRKNTMKALEEDQRLNKQRDLDSLLARKEADAILKENEDRRQ--KMRLTEAKKLAEEH 522
E RK LEE+Q+L++Q+ L ++ + + RRQ + E ++L +E
Sbjct: 1468 EPERK----FLEEEQQLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFREEEQLRQER 1523
Query: 523 LATAKAIKDSDENSMMNKLKIMEENQKLLDLEE 621
+ ++ D + + K+ + Q+ +E+
Sbjct: 1524 EEQQLSRQERDRKFRLEEQKVRRQEQERKFMED 1556
Score = 40.8 bits (94), Expect = 0.005
Identities = 31/167 (18%), Positives = 75/167 (44%), Gaps = 5/167 (2%)
Frame = +1
Query: 4 EERRFKMQEYMQQMDDVKKMREIDKLKNEEDDEEIRIFXXXXXXXXXXXXXXXXXXYDEK 183
EE+R + + Q++ ++ R LK EE+ + R+ K
Sbjct: 573 EEKRLEQERREQRLKREQEERRDQLLKREEERRQQRL----------------------K 610
Query: 184 QNNLENIKNKLSAQLKLKMDDE---DLRIRNAIAEKEEKFQ--NDETDKEKKRQDTLKSI 348
+ E ++ +L + +++ E D R++ E+E + + E +E++ + +
Sbjct: 611 REQEERLEQRLKREEVERLEQEERRDERLKREEPEEERRHELLKSEEQEERRHEQLRREQ 670
Query: 349 EDHRKNTMKALEEDQRLNKQRDLDSLLARKEADAILKENEDRRQKMR 489
++ R+ +K EE++RL ++ + R+E + +E E R++++
Sbjct: 671 QERREQRLKREEEEERLEQRLKREHEEERREQELAEEEQEQARERIK 717
Score = 39.7 bits (91), Expect = 0.011
Identities = 33/156 (21%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
Frame = +1
Query: 178 EKQNNLENIKNKLSAQLKLKMDDEDLRIRNAIAEKEEKFQNDETDKEKKRQDTLKSIEDH 357
+ + E + +LSA+ L+ E ++E++F +E +KE++ +
Sbjct: 790 QAEEKSERGRQRLSARPPLREQRERQLRAEERQQREQRFLPEEEEKEQRGRQ-----RRE 844
Query: 358 RKNTMKALEEDQRLNKQRDLDSLLARKEADAILKENEDRRQKMR--------LTEAKKLA 513
R+ ++ LEE+++L ++ L ++E D + ++ E RRQ+ R L E +K
Sbjct: 845 REKELQFLEEEEQLQRRERAQQL--QEEEDGLQEDQERRRQEQRRDQKWRWQLEEERKRR 902
Query: 514 EEHLATAKAIKDSDENSMMNKLKIMEENQKLLDLEE 621
L A+++ + + ++++E ++ L EE
Sbjct: 903 RHTLYAKPALQE----QLRKEQQLLQEEEEELQREE 934
Score = 37.7 bits (86), Expect = 0.040
Identities = 30/168 (17%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Frame = +1
Query: 175 DEKQNNLENIKNKLSAQLKLKMDDEDLRIRNAIAEKEEKFQNDETDKEKKRQDTLK---- 342
+E++ + + +L+ ++E L+ R + +E+ + D+E++RQ+ +
Sbjct: 832 EEEKEQRGRQRREREKELQFLEEEEQLQRRERAQQLQEEEDGLQEDQERRRQEQRRDQKW 891
Query: 343 --SIEDHRKNTMKALEEDQRLNKQRDLDSLLARKEADAILKENEDRR----QKMRLTEAK 504
+E+ RK L L +Q + L ++E + + +E ++R Q+ + E +
Sbjct: 892 RWQLEEERKRRRHTLYAKPALQEQLRKEQQLLQEEEEELQREEREKRRRQEQERQYREEE 951
Query: 505 KLAEEHLATAKAIKDSDENSMMNKLKIMEENQKLLDLEESVFQEYARK 648
+L +E + ++ ++ + + +++KL EE + E K
Sbjct: 952 QLQQEEEQLLR--EEREKRRRQERERQYRKDKKLQQKEEQLLGEEPEK 997
Score = 35.0 bits (79), Expect = 0.26
Identities = 24/138 (17%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Frame = +1
Query: 241 DDEDLRIRNAIAEKEE-KFQNDETDKEKKRQDTLKSIEDHRKNTMKALEEDQRLNKQR-D 414
++++ R R + KEE K Q +E ++++ Q+ + + + ++ +++ +QR
Sbjct: 242 EEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLR 301
Query: 415 LDSLLARKEADAILKENEDRRQKMRLTEAKKLAEEHLATAKAIKDSDENSMMNKLKIMEE 594
+ L RK+ + ++ E+RR++ E ++ E + + ++ + + E
Sbjct: 302 REQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEERRE 361
Query: 595 NQKLLDLEESVFQEYARK 648
Q + EE ++ R+
Sbjct: 362 QQLRREQEEERREQQLRR 379
Score = 33.9 bits (76), Expect = 0.58
Identities = 41/230 (17%), Positives = 96/230 (41%), Gaps = 14/230 (6%)
Frame = +1
Query: 1 REERRFKMQEYMQQMDDVKKMREIDKLKNEEDDEEIRIFXXXXXXXXXXXXXXXXXXYDE 180
R++R+ + +E + + +K +++ + DEE+ +E
Sbjct: 138 RQKRQEQERELAEGEEQSEKQERLEQRDRQRRDEEL------------WRQRQEWQEREE 185
Query: 181 KQNNLENIKNKLSAQLKLKMDDEDLRIRNAIAEKEEKFQNDETDKEKKRQDTLKSIEDH- 357
++ E +++ + + D+E LR R + E K + ++ + ++RQD + E+
Sbjct: 186 RRAEEEQLQSCKGHETEEFPDEEQLR-RRELLELRRKGREEKQQQRRERQDRVFQEEEEK 244
Query: 358 --RKNTMKALEEDQRL-----NKQRDLDS------LLARKEADAILKENEDRRQKMRLTE 498
RK +E+++L +QR+L L R+E +E E ++Q++R +
Sbjct: 245 EWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLRREQ 304
Query: 499 AKKLAEEHLATAKAIKDSDENSMMNKLKIMEENQKLLDLEESVFQEYARK 648
+ +E + + ++ + + E Q + EE Q+ R+
Sbjct: 305 QLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRRE 354
Score = 32.7 bits (73), Expect = 1.3
Identities = 29/146 (19%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Frame = +1
Query: 1 REERRFKMQEYMQQM---DDVKKMREIDKLKNEEDDEEIRIFXXXXXXXXXXXXXXXXXX 171
REE + + QQ+ + +K RE ++L+ E +++++R
Sbjct: 1729 REEEQLRQGREEQQLRSQESDRKFREEEQLRQEREEQQLR-----------PQQRDGKYR 1777
Query: 172 YDEKQNNLENIKNKLSAQ--LKLKMDDEDLRIRNAIAEKEEKFQNDETDKEKKRQDTLKS 345
++E+Q LE + +L + + + +++ + E++E +Q +E + ++R+ L+
Sbjct: 1778 WEEEQLQLEEQEQRLRQERDRQYRAEEQFATQEKSRREEQELWQEEEQKRRQERERKLR- 1836
Query: 346 IEDHRKNTMKALEEDQRLNKQRDLDS 423
E+H + K E+QR + ++ S
Sbjct: 1837 -EEHIRRQQK---EEQRHRQVGEIQS 1858
>sp|P08799|MYS2_DICDI Myosin II heavy chain, non muscle
Length = 2116
Score = 48.5 bits (114), Expect = 2e-05
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 14/178 (7%)
Frame = +1
Query: 175 DEKQNNLENIKNKLSAQL------KLKMDDEDLRIRNAIAEKEEKFQNDETDKEKKRQDT 336
D+ + LE + L AQ+ K++++ E + + E E + E K + Q
Sbjct: 1866 DKSKKTLEGEIDNLRAQIEDEGKIKMRLEKEKRALEGELEELRETVEEAEDSKSEAEQSK 1925
Query: 337 LK---SIEDHRKNTMKALE-----EDQRLNKQRDLDSLLARKEADAILKENEDRRQKMRL 492
+ED R+N K ++ ED + N QR++ R E ++I + N DR +K
Sbjct: 1926 RLVELELEDARRNLQKEIDAKEIAEDAKSNLQREIVEAKGRLEEESIARTNSDRSRKRLE 1985
Query: 493 TEAKKLAEEHLATAKAIKDSDENSMMNKLKIMEENQKLLDLEESVFQEYARKVIEHCE 666
E L + A KA + + + ++ E +K + E++ +E+ V+E E
Sbjct: 1986 AEIDALTAQVDAEQKAKNQQIKENKKIETELKEYRKKFGESEKTKTKEFL--VVEKLE 2041
Score = 41.2 bits (95), Expect = 0.004
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 4/201 (1%)
Frame = +1
Query: 28 EYMQQMDDVKKMR--EIDKLKNEEDDEEIRIFXXXXXXXXXXXXXXXXXXYDEKQNNLEN 201
E ++D+ KK ++D LK + +DE+ ++ E +N E+
Sbjct: 1748 EQNTKLDEAKKKLTDDVDTLKKQLEDEKKKLNESERAKKRL-----------ESEN--ED 1794
Query: 202 IKNKLSAQLKLKMDDEDLRIRNAIAEKEEKFQ-NDETDKEKKRQDTLKSIEDHRKNTMKA 378
KL A++K + E R + K+ K++ NDE + + + +ED
Sbjct: 1795 FLAKLDAEVKNRSRAEKDRKKYEKDLKDTKYKLNDEAATKTQTEIGAAKLEDQIDELRSK 1854
Query: 379 LEEDQRLNKQRDLDSLLARKEADAILKENEDR-RQKMRLTEAKKLAEEHLATAKAIKDSD 555
LE++Q Q D E D + + ED + KMRL + K+ E L + +
Sbjct: 1855 LEQEQAKATQADKSKKTLEGEIDNLRAQIEDEGKIKMRLEKEKRALEGELEELRETVEEA 1914
Query: 556 ENSMMNKLKIMEENQKLLDLE 618
E+S E++++L++LE
Sbjct: 1915 EDSKSE----AEQSKRLVELE 1931
Score = 35.8 bits (81), Expect = 0.15
Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 20/182 (10%)
Frame = +1
Query: 172 YDEKQNNLENIKNKLSAQ---LKLKMDDEDLRIRNAIAEK---EEKFQN--DETDKEKKR 327
YD K + LE K +L + ++ ++D++ L + N +K EEK ++ +E +E+K
Sbjct: 883 YDSK-DALEAQKRELEIRVEDMESELDEKKLALENLQNQKRSVEEKVRDLEEELQEEQKL 941
Query: 328 QDTLKSIEDHRKNTMKALEEDQRLNK-QRDLDSLLARKEADAILKE--------NEDRRQ 480
++TL+ + +K + LEE +R+N Q D S L K D + KE +E+ +
Sbjct: 942 RNTLEKL---KKKYEEELEEMKRVNDGQSDTISRL-EKIKDELQKEVEELTESFSEESKD 997
Query: 481 KMRLTEAKKLAEEHLATAKAIKDS---DENSMMNKLKIMEENQKLLDLEESVFQEYARKV 651
K L + + + L DS D++ ++ + K +EE +L ++E++ E A K+
Sbjct: 998 KGVLEKTRVRLQSELDDLTVRLDSETKDKSELLRQKKKLEE--ELKQVQEALAAETAAKL 1055
Query: 652 IE 657
+
Sbjct: 1056 AQ 1057
Score = 35.4 bits (80), Expect = 0.20
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 14/181 (7%)
Frame = +1
Query: 184 QNNLENIKNKLSAQLKLKMDDEDLRIRNAIAEKEEKFQNDETDKEKKRQDT--------- 336
+ + N+K +L A+ K K E R+ E E K N++ ++EKK++++
Sbjct: 1261 ETSFNNLKLELEAEQKAKQALEKKRLG---LESELKHVNEQLEEEKKQKESNEKRKVDLE 1317
Query: 337 -----LKSIEDHRKNTMKALEEDQRLNKQRDLDSLLARKEADAILKENEDRRQKMRLTEA 501
LK + + KA+ E + K+ +LD + R+ AD + ++ Q L
Sbjct: 1318 KEVSELKDQIEEEVASKKAVTEAKN-KKESELDE-IKRQYADVVSSRDKSVEQLKTLQAK 1375
Query: 502 KKLAEEHLATAKAIKDSDENSMMNKLKIMEENQKLLDLEESVFQEYARKVIEHCEKGGRN 681
+ A+ D E S +EE K L+ EE+ + A K ++ E R+
Sbjct: 1376 NEELRNTAEEAEGQLDRAERSKKKAEFDLEEAVKNLE-EETAKKVKAEKAMKKAETDYRS 1434
Query: 682 T 684
T
Sbjct: 1435 T 1435
Score = 32.3 bits (72), Expect = 1.7
Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 6/212 (2%)
Frame = +1
Query: 4 EERRFKMQEYMQQMDDVKKMREIDKLKNEEDDEEIRIFXXXXXXXXXXXXXXXXXXYDEK 183
EE+ ++E +Q+ ++ E K K EE+ EE++ DE
Sbjct: 925 EEKVRDLEEELQEEQKLRNTLEKLKKKYEEELEEMK----RVNDGQSDTISRLEKIKDEL 980
Query: 184 QNNLENIKNKLSAQLKLK--MDDEDLRIRNAIAEKEEKFQNDETDK-EKKRQDTLKSIED 354
Q +E + S + K K ++ +R+++ + + + ++ DK E RQ K +E+
Sbjct: 981 QKEVEELTESFSEESKDKGVLEKTRVRLQSELDDLTVRLDSETKDKSELLRQK--KKLEE 1038
Query: 355 HRKNTMKALEEDQRLN-KQRDLDSLLARKEADAILKENEDRRQKMRLTEAKKLAEEHLAT 531
K +AL + Q + L + + K N + + + ++KK E L
Sbjct: 1039 ELKQVQEALAAETAAKLAQEAANKKLQGEYTELNEKFNSEVTARSNVEKSKKTLESQLVA 1098
Query: 532 AKAIKDSDENSMMNKLKIMEENQKLLD--LEE 621
D ++ + +E+ +K LD LEE
Sbjct: 1099 VNNELDEEKKNR----DALEKKKKALDAMLEE 1126
Score = 32.3 bits (72), Expect = 1.7
Identities = 29/156 (18%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Frame = +1
Query: 193 LENIKNKLSAQ--LKLKMDDEDLRIRNAIAEKEEKFQNDETDKEKKRQDTLKSIEDHRKN 366
LE ++++L + + +++D R+ + + ++K+ + E ++ K + K + D +
Sbjct: 1708 LEEVRDQLEEEEDSRSELEDSKRRLTTEVEDIKKKY-DAEVEQNTKLDEAKKKLTDD-VD 1765
Query: 367 TMKALEEDQ--RLNKQRDLDSLLARKEADAILKENEDRRQKMRLTEAKKLAEEHLATAK- 537
T+K ED+ +LN+ L + D + K + + + + R + +K E+ L K
Sbjct: 1766 TLKKQLEDEKKKLNESERAKKRLESENEDFLAKLDAEVKNRSRAEKDRKKYEKDLKDTKY 1825
Query: 538 AIKDSDENSMMNKLKIMEENQKLLDLEESVFQEYAR 645
+ D ++ + ++ +L + QE A+
Sbjct: 1826 KLNDEAATKTQTEIGAAKLEDQIDELRSKLEQEQAK 1861
Score = 32.0 bits (71), Expect = 2.2
Identities = 34/182 (18%), Positives = 75/182 (41%), Gaps = 32/182 (17%)
Frame = +1
Query: 184 QNNLENIKNKLSAQLKLKMDDE--DLRIRNAIAEKEEKFQ-------------------- 297
+ L+ ++ L+A+ K+ E + +++ E EKF
Sbjct: 1037 EEELKQVQEALAAETAAKLAQEAANKKLQGEYTELNEKFNSEVTARSNVEKSKKTLESQL 1096
Query: 298 ---NDETDKEKKRQDTLKSIEDHRKNTMKALEEDQR------LNKQRDLDSLLARKEADA 450
N+E D+EKK +D L + +K + A+ E+ + +++ L L ++E+D
Sbjct: 1097 VAVNNELDEEKKNRDAL----EKKKKALDAMLEEMKDQLESTGGEKKSLYDLKVKQESDM 1152
Query: 451 ILKENEDRRQKMRLTEAKKLAEEHLATAKAIKDSDENSMMNKLKIMEENQKL-LDLEESV 627
N+ + + + +K+ ++ E + K + ++ +K+ LDLE+
Sbjct: 1153 EALRNQISELQSTIAKLEKIKSTLEGEVARLQGELEAEQLAKSNVEKQKKKVELDLEDKS 1212
Query: 628 FQ 633
Q
Sbjct: 1213 AQ 1214
Score = 30.8 bits (68), Expect = 4.9
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Frame = +1
Query: 208 NKLSAQL---KLKMDDEDLRIRNAIAEKEEKFQN--DETDKEKKRQDTLKSIEDHRKNTM 372
++L AQL + ++ + +I++ +AE +E + DE + K +++E +
Sbjct: 1653 DELRAQLDSERAALNASEKKIKSLVAEVDEVKEQLEDEILAKDKLVKAKRALEVELEEVR 1712
Query: 373 KALEEDQRLNKQ-RDLDSLLARKEADAILKENEDRRQKMRLTEAKKLAEEHLATAKAIKD 549
LEE++ + D L + D K + + Q +L EAKK + + T K +
Sbjct: 1713 DQLEEEEDSRSELEDSKRRLTTEVEDIKKKYDAEVEQNTKLDEAKKKLTDDVDTLKKQLE 1772
Query: 550 SDENSMMNKLKIMEENQKLLDLEESVF 630
++ KL E +K L+ E F
Sbjct: 1773 DEK----KKLNESERAKKRLESENEDF 1795
>sp|Q02224|CENPE_HUMAN Centromeric protein E (CENP-E protein)
Length = 2663
Score = 47.8 bits (112), Expect = 4e-05
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 14/219 (6%)
Frame = +1
Query: 1 REERRFKMQEYMQQMDDVKKMREI-----DKLKNEEDDEEI-------RIFXXXXXXXXX 144
+EE R +Q + + K+R I DKL N + D E +I
Sbjct: 1773 QEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQL 1832
Query: 145 XXXXXXXXXYDEKQNNLENIKNKLSAQ-LKL-KMDDEDLRIRNAIAEKEEKFQNDETDKE 318
+K + +E +K ++ Q L L K++ E+L + + E E+ ++
Sbjct: 1833 ITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQELHENLEEMKS-----V 1887
Query: 319 KKRQDTLKSIEDHRKNTMKALEEDQRLNKQRDLDSLLARKEADAILKENEDRRQKMRLTE 498
K +D L+ +E+ K L+E + K RDL+ K A + KE+++ K+R
Sbjct: 1888 MKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLR--- 1944
Query: 499 AKKLAEEHLATAKAIKDSDENSMMNKLKIMEENQKLLDL 615
+K++E+ + + KD D++ + KI E +K L L
Sbjct: 1945 -EKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQL 1982
Score = 42.7 bits (99), Expect = 0.001
Identities = 47/225 (20%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Frame = +1
Query: 4 EERRFKMQEYMQQMDDVKKMREI-----DKLKNE---------EDDEEIRIFXXXXXXXX 141
+E +M+ ++ DD+++++E+ D+LK E +EE+++
Sbjct: 1431 QESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKV-AHCCLKEQ 1489
Query: 142 XXXXXXXXXXYDEKQNNLENIKNKLSAQLKLKMDDEDLRIRNAIAEKEEKFQNDETDKEK 321
EK+ + I+ +L A ++D+ I EKEE+ + + +
Sbjct: 1490 EETINELRVNLSEKETEISTIQKQLEA-----INDKLQNKIQEIYEKEEQLNIKQISEVQ 1544
Query: 322 KRQDTLKSIEDHRKNTMKALEEDQRLNKQRDLDSLL--ARKEADAILKENED--RRQKMR 489
+ + LK ++HRK AL+ + +K +L + L +++E ++KE E+ R Q+
Sbjct: 1545 ENVNELKQFKEHRKAKDSALQSIE--SKMLELTNRLQESQEEIQIMIKEKEEMKRVQEAL 1602
Query: 490 LTEAKKLAEEHLATAKAIKDSDEN--SMMNKLKIMEENQKLLDLE 618
E +L E +K+S E + + E +K+ ++E
Sbjct: 1603 QIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIE 1647
Score = 42.0 bits (97), Expect = 0.002
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Frame = +1
Query: 178 EKQNNLENIKNKLSAQLKLKMDD---EDLRIRNAIAEKEEKFQNDETDKEKKRQDTLKSI 348
EK +E++K + Q KL +++ E++R+ + E E+ ++ K +D L+S+
Sbjct: 1641 EKMCEIEHLKEQFETQ-KLNLENIETENIRLTQILHENLEEMRS-----VTKERDDLRSV 1694
Query: 349 EDHRKNTMKALEEDQRLNKQRDLDSLLARKEADAILKENEDRRQKMRLTEAKKLAEEHLA 528
E+ K L+E+ R RDL+ K LKE+++ K+R ++K E
Sbjct: 1695 EETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEK-TNEISN 1753
Query: 529 TAKAIKDSDENSMMNKLKIMEE 594
K ++ S++ LKI EE
Sbjct: 1754 MQKDLEHSNDALKAQDLKIQEE 1775
>sp|Q8R9D0|MUTS2_THETN MutS2 protein
Length = 790
Score = 47.8 bits (112), Expect = 4e-05
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 10/130 (7%)
Frame = +1
Query: 328 QDTLKSIEDHRKNTMKALEEDQRLNKQRDLDSLLARKEA-------DAILKENEDRRQKM 486
+D +K +E+ RK+ A +E +RL K+ ++ KE D ILKE +++ +++
Sbjct: 519 EDVIKDVEEKRKDLENAYQEVERLKKEVEVLKEELEKEKRKLESQKDKILKEAKEKAREI 578
Query: 487 RLTEAKKLAEEHLATAKAIKDSDENSMMNKLKIMEENQK-LLDLEESVF--QEYARKVIE 657
+ EAK+ AEE + K ++ ++N +I E+ +K L +LEE V +E++ I
Sbjct: 579 -IKEAKQTAEEVIKRIKEAEEKEKNKDRAIQEIREKIKKNLEELEEEVLKPKEFSYGKIP 637
Query: 658 HCEKGGRNTY 687
K G+ Y
Sbjct: 638 DSLKAGQTVY 647
>sp|P36044|MNN4_YEAST Protein MNN4
Length = 1178
Score = 47.0 bits (110), Expect = 7e-05
Identities = 42/172 (24%), Positives = 76/172 (44%)
Frame = +1
Query: 4 EERRFKMQEYMQQMDDVKKMREIDKLKNEEDDEEIRIFXXXXXXXXXXXXXXXXXXYDEK 183
EER+ + ++ ++ + KK E K K EE+ ++ +EK
Sbjct: 1035 EERKRREKKKKEEEEKKKKEEEEKKKKEEEEKKK--------------------KEEEEK 1074
Query: 184 QNNLENIKNKLSAQLKLKMDDEDLRIRNAIAEKEEKFQNDETDKEKKRQDTLKSIEDHRK 363
+ E K K + K K ++E+ + + E+EEK + +E +K K + K ED K
Sbjct: 1075 KKKEEEEKKKKEEEEKKKQEEEEKKKK----EEEEKKKQEEGEKMKNEDEENKKNEDEEK 1130
Query: 364 NTMKALEEDQRLNKQRDLDSLLARKEADAILKENEDRRQKMRLTEAKKLAEE 519
K EE+++ ++++ +K D K+ E+ +K E KK EE
Sbjct: 1131 K--KNEEEEKKKQEEKN------KKNEDEEKKKQEEEEKKKNEEEEKKKQEE 1174
Score = 45.8 bits (107), Expect = 1e-04
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 2/174 (1%)
Frame = +1
Query: 7 ERRFKMQEYMQQMDDVKKMREIDKLKNEEDDEEIRIFXXXXXXXXXXXXXXXXXXYDEKQ 186
E R + ++ ++ ++ KK E +K K EE++++ + +EK+
Sbjct: 1035 EERKRREKKKKEEEEKKKKEEEEKKKKEEEEKKKK-------------------EEEEKK 1075
Query: 187 NNLENIKNKLSAQLKLKMDDEDLRIRNAIAEKEEKFQNDETDKEKKRQDTLKSIEDH--R 360
E K K + K K ++E+ + + E+EEK + +E +K K + K ED +
Sbjct: 1076 KKEEEEKKKKEEEEKKKQEEEEKKKK----EEEEKKKQEEGEKMKNEDEENKKNEDEEKK 1131
Query: 361 KNTMKALEEDQRLNKQRDLDSLLARKEADAILKENEDRRQKMRLTEAKKLAEEH 522
KN + ++ + NK + E + K+ E+ ++K E KK E H
Sbjct: 1132 KNEEEEKKKQEEKNK---------KNEDEEKKKQEEEEKKKNEEEEKKKQEEGH 1176
Score = 41.6 bits (96), Expect = 0.003
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Frame = +1
Query: 277 EKEEKFQNDETDKEKKRQDTLKSIEDHRKNTMKALEEDQRLNKQRDLDSLLARKEADAIL 456
++ EK + +E +K+KK ++ K E+ K K EE+++ +KE +
Sbjct: 1038 KRREKKKKEEEEKKKKEEEEKKKKEEEEK---KKKEEEEK-----------KKKEEEEKK 1083
Query: 457 KENEDRRQKMRLTEAKKLAEEH---LATAKAIKDSDENSMMNKLKIMEENQKLLDLEESV 627
K+ E+ ++K E KK EE + +K+ DE + N+ +E +K + EE
Sbjct: 1084 KKEEEEKKKQEEEEKKKKEEEEKKKQEEGEKMKNEDEENKKNE----DEEKKKNEEEEKK 1139
Query: 628 FQEYARKVIEHCEK 669
QE K E EK
Sbjct: 1140 KQEEKNKKNEDEEK 1153
Score = 38.1 bits (87), Expect = 0.031
Identities = 31/103 (30%), Positives = 48/103 (46%)
Frame = +1
Query: 373 KALEEDQRLNKQRDLDSLLARKEADAILKENEDRRQKMRLTEAKKLAEEHLATAKAIKDS 552
K LEE +R K++ + +KE + K+ E+ ++K E KK EE K K+
Sbjct: 1032 KLLEERKRREKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEE----KKKKEE 1087
Query: 553 DENSMMNKLKIMEENQKLLDLEESVFQEYARKVIEHCEKGGRN 681
+E K K EE +K + EE QE K+ E+ +N
Sbjct: 1088 EE-----KKKQEEEEKKKKEEEEKKKQEEGEKMKNEDEENKKN 1125
>sp|Q09863|YAFA_SCHPO Hypothetical protein C29E6.10c in chromosome I
Length = 1085
Score = 46.6 bits (109), Expect = 9e-05
Identities = 44/218 (20%), Positives = 99/218 (45%), Gaps = 10/218 (4%)
Frame = +1
Query: 4 EERRFKMQEYMQQMDDVKKMREIDKLKNEEDDEEIRIFXXXXXXXXXXXXXXXXXXYDEK 183
++R+ K+ E +++ + K+ RE+ K++ +E + +
Sbjct: 566 QQRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAA 625
Query: 184 QNNLENIKNKLSAQLKLKMDDEDLRIRNAIAEKE-EKFQNDETDKEKKRQDTLKSIEDHR 360
Q LE K + + K +++ L+ ++E E+ + +E K+K+R+ LK + +
Sbjct: 626 QKALEA---KRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLK--KQQQ 680
Query: 361 KNTMKALEEDQRLNKQRDLDSLLARKEADAILKENEDRRQKMRLTEAKKLAEEHLATAKA 540
+ + + +QRL ++ + L RK + + KE E+RR++ L + + E L AK
Sbjct: 681 EADREKMAREQRLREEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKI 740
Query: 541 I---------KDSDENSMMNKLKIMEENQKLLDLEESV 627
+ SD + ++L + E+ L++ E+ +
Sbjct: 741 AAFFAPNQTKEGSDGCTTSSQLGLFEKKGDLVNDEDKL 778
Score = 39.3 bits (90), Expect = 0.014
Identities = 37/177 (20%), Positives = 82/177 (46%), Gaps = 1/177 (0%)
Frame = +1
Query: 178 EKQNNLENIKNKLSAQLKLKMDDEDLRIRNAIAEKEEKFQNDETDKEKKRQDTLKSIEDH 357
E++N + + + K K D+ +++ A KEE+ Q E ++ + Q K++E
Sbjct: 577 EEENKRKQERELKKIREKEKKRDKKKQLKLA---KEEERQRREAERLAE-QAAQKALEAK 632
Query: 358 RKNTMKALEEDQRLNKQRDLDSLLARKEADAILKENEDRRQKMRLTEAKKLAEEHLATAK 537
R+ + E+QRL ++++ K+ + ++ + +QK + E K ++ A +
Sbjct: 633 RQEEARKKREEQRLKREQE-------KKQQELERQKREEKQKQKEREKKLKKQQQEADRE 685
Query: 538 AIKDSDENSMMNKLKIMEENQKLLDLEESVFQEYARKVIE-HCEKGGRNTYPLKIAA 705
+ + +I+EE ++ L++ + R+++E E+ R KIAA
Sbjct: 686 KMAREQRLREEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAA 742
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.309 0.126 0.328
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,649,491
Number of Sequences: 369166
Number of extensions: 1033674
Number of successful extensions: 5818
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5532
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8245425915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)