Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_004_H07
(595 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P51121|GLNA_XENLA Glutamine synthetase (Glutamate--ammon... 267 2e-71
sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammon... 262 4e-70
sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammon... 261 9e-70
sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammon... 261 1e-69
sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammon... 260 2e-69
sp|Q4R7U3|GLNA_MACFA Glutamine synthetase (Glutamate--ammon... 260 2e-69
sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammon... 259 4e-69
sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia... 258 6e-69
sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (... 258 8e-69
sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammon... 258 8e-69
>sp|P51121|GLNA_XENLA Glutamine synthetase (Glutamate--ammonia ligase)
Length = 392
Score = 267 bits (682), Expect = 2e-71
Identities = 118/167 (70%), Positives = 144/167 (86%)
Frame = +2
Query: 2 VMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNY 181
VMP+QWEFQ+GPCEGI++ DHLWMAR++LHRV EDFGVV + DPKP+ G+WNGAG HTNY
Sbjct: 197 VMPSQWEFQVGPCEGIDMGDHLWMARFILHRVCEDFGVVATLDPKPMTGNWNGAGCHTNY 256
Query: 182 STIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGV 361
ST MR GG+K+IE+AIEK+ KRH HI YDP G+DN RRLTG+HETS+I +FS+GV
Sbjct: 257 STESMRVEGGLKHIEDAIEKLGKRHDYHICVYDPRGGKDNSRRLTGQHETSSIHEFSAGV 316
Query: 362 ANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 502
ANRGASIRIPRQV ++G+GY EDRRP++NCDPY+VTE +VRTTIL +
Sbjct: 317 ANRGASIRIPRQVGQEGYGYFEDRRPAANCDPYAVTEALVRTTILNE 363
>sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 262 bits (670), Expect = 4e-70
Identities = 120/167 (71%), Positives = 139/167 (83%)
Frame = +2
Query: 2 VMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNY 181
VMPAQWEFQIGPCEGI + DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+
Sbjct: 197 VMPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNF 256
Query: 182 STIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGV 361
ST MR G+KYIEEAI+K+SKRH HI AYDP G DN RRLTG HETS I+DFS+GV
Sbjct: 257 STKAMREENGLKYIEEAIDKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGV 316
Query: 362 ANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 502
ANRGASIRIPR V ++ GY EDRRPS+NCDPY+VTE IVRT +L +
Sbjct: 317 ANRGASIRIPRTVGQEKRGYFEDRRPSANCDPYAVTEAIVRTCLLNE 363
>sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 261 bits (667), Expect = 9e-70
Identities = 118/167 (70%), Positives = 140/167 (83%)
Frame = +2
Query: 2 VMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNY 181
VMPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+
Sbjct: 197 VMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNF 256
Query: 182 STIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGV 361
ST MR G+KYIEE+IEK+SKRH HI AYDP G DN RRLTG HETS I+DFS+GV
Sbjct: 257 STKAMREENGLKYIEESIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGV 316
Query: 362 ANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 502
ANRGASIRIPR V ++ GY EDRRPS+NCDP+SVTE ++RT +L +
Sbjct: 317 ANRGASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLLNE 363
>sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 261 bits (666), Expect = 1e-69
Identities = 119/167 (71%), Positives = 139/167 (83%)
Frame = +2
Query: 2 VMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNY 181
VMPAQWEFQ+GPCEGI + DHLW+AR++LHRV EDFGV+VSFDPKPI G+WNGAG HTN+
Sbjct: 197 VMPAQWEFQVGPCEGIEMGDHLWIARFILHRVCEDFGVIVSFDPKPIPGNWNGAGCHTNF 256
Query: 182 STIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGV 361
ST MR GG+K+IEEAIEK+SKRH HI AYDP G DN RRLTG HETS+I +FS+GV
Sbjct: 257 STKNMREDGGLKHIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSSIHEFSAGV 316
Query: 362 ANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 502
ANRGASIRIPR V + GY EDR PS+NCDPY+VTE +VRT +L +
Sbjct: 317 ANRGASIRIPRNVGHEKKGYFEDRGPSANCDPYAVTEALVRTCLLNE 363
>sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 260 bits (664), Expect = 2e-69
Identities = 118/167 (70%), Positives = 139/167 (83%)
Frame = +2
Query: 2 VMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNY 181
VMPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+
Sbjct: 197 VMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNF 256
Query: 182 STIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGV 361
ST MR G+KYIEEAIEK+SKRH HI AYDP G DN RRLTG HETS I+DFS+GV
Sbjct: 257 STKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGV 316
Query: 362 ANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 502
ANR ASIRIPR V ++ GY EDRRPS+NCDP+SVTE ++RT +L +
Sbjct: 317 ANRSASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLLNE 363
>sp|Q4R7U3|GLNA_MACFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 374
Score = 260 bits (664), Expect = 2e-69
Identities = 118/167 (70%), Positives = 139/167 (83%)
Frame = +2
Query: 2 VMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNY 181
VMPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+
Sbjct: 198 VMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNF 257
Query: 182 STIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGV 361
ST MR G+KYIEEAIEK+SKRH HI AYDP G DN RRLTG HETS I+DFS+GV
Sbjct: 258 STKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGV 317
Query: 362 ANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 502
ANR ASIRIPR V ++ GY EDRRPS+NCDP+SVTE ++RT +L +
Sbjct: 318 ANRSASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLLNE 364
>sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammonia ligase)
Length = 361
Score = 259 bits (662), Expect = 4e-69
Identities = 122/167 (73%), Positives = 139/167 (83%)
Frame = +2
Query: 2 VMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNY 181
VMPAQWEFQ+GPCEGI + D LWMARYLLHRVAEDF VVV+ DPKPI GDWNGAG HTN+
Sbjct: 194 VMPAQWEFQVGPCEGITMGDDLWMARYLLHRVAEDFDVVVTLDPKPIPGDWNGAGMHTNF 253
Query: 182 STIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGV 361
ST MR P GI IE AI+K+SK H +HI+AYDPH G+DN RRLTG +ETS+I DFS+GV
Sbjct: 254 STEAMRGPNGILEIESAIDKLSKVHEKHIKAYDPHAGKDNERRLTGHYETSSIHDFSAGV 313
Query: 362 ANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 502
ANRGASIRIPR V+E+ GYLEDRRPSSN DPY V+ER+VRT L +
Sbjct: 314 ANRGASIRIPRGVAEEKTGYLEDRRPSSNADPYVVSERLVRTICLNE 360
>sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 258 bits (660), Expect = 6e-69
Identities = 117/167 (70%), Positives = 139/167 (83%)
Frame = +2
Query: 2 VMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNY 181
VMPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+
Sbjct: 197 VMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNF 256
Query: 182 STIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGV 361
ST MR G+KYIEEAIEK+SKRH HI AYDP G DN RRLTG HETS I+DFS+GV
Sbjct: 257 STKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNTRRLTGFHETSNINDFSAGV 316
Query: 362 ANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 502
ANRGASIRIPR ++ GY EDRRPS+NCDP++VTE ++RT +L +
Sbjct: 317 ANRGASIRIPRTGGQEKKGYFEDRRPSANCDPFAVTEALIRTCLLNE 363
>sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (Glutamate--ammonia ligase 2)
Length = 369
Score = 258 bits (659), Expect = 8e-69
Identities = 116/167 (69%), Positives = 141/167 (84%)
Frame = +2
Query: 2 VMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNY 181
VMPAQWEFQ+GPCEGI++ D LWMAR+LLHR++E+FG+V + DPKP+ GDWNGAGAHTN
Sbjct: 203 VMPAQWEFQVGPCEGISIGDDLWMARFLLHRISEEFGIVSTLDPKPMPGDWNGAGAHTNV 262
Query: 182 STIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGV 361
ST MR GGI+ IE+A+ K+SK H HI AYDP +G+DN RRLTG+HETS+I+DFS+GV
Sbjct: 263 STKAMREDGGIRDIEKAVAKLSKCHERHIRAYDPKQGQDNARRLTGKHETSSINDFSAGV 322
Query: 362 ANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 502
ANRG SIRIPR V++DG GY EDRRPSSNCDPYSV E I+RT L++
Sbjct: 323 ANRGCSIRIPRGVNDDGKGYFEDRRPSSNCDPYSVVEAILRTICLDE 369
>sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 258 bits (659), Expect = 8e-69
Identities = 118/167 (70%), Positives = 138/167 (82%)
Frame = +2
Query: 2 VMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNY 181
VMPAQWEFQIGPCEGI + DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+
Sbjct: 197 VMPAQWEFQIGPCEGIRMGDHLWIARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNF 256
Query: 182 STIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGV 361
ST MR G+K+IEEAI+K+SKRH HI AYDP G DN R LTG HETS I+DFS+GV
Sbjct: 257 STKAMREENGLKWIEEAIDKLSKRHQYHIRAYDPKGGLDNARALTGFHETSNINDFSAGV 316
Query: 362 ANRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 502
ANRGASIRIPR V ++ GY EDRRPS+NCDPY+VTE IVRT +L +
Sbjct: 317 ANRGASIRIPRTVGQEKKGYFEDRRPSANCDPYAVTEAIVRTCLLNE 363
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,491,706
Number of Sequences: 369166
Number of extensions: 1233221
Number of successful extensions: 3560
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3475
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4504118060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)