Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_004_F10
(440 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 127 8e-30
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 127 8e-30
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 127 8e-30
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 124 7e-29
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 124 9e-29
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 123 2e-28
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 121 6e-28
sp|Q24789|HSP70_ECHGR Heat shock cognate 70 kDa protein (HS... 121 6e-28
sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein 120 1e-27
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 120 1e-27
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 127 bits (320), Expect = 8e-30
Identities = 60/116 (51%), Positives = 79/116 (68%)
Frame = +2
Query: 14 RQKDRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKD 193
+Q+D++++KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+
Sbjct: 531 KQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKE 590
Query: 194 EFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 361
EF++ KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 591 EFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 127 bits (320), Expect = 8e-30
Identities = 60/116 (51%), Positives = 79/116 (68%)
Frame = +2
Query: 14 RQKDRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKD 193
+Q+D++++KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+
Sbjct: 531 KQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKE 590
Query: 194 EFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 361
EF++ KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 591 EFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 127 bits (320), Expect = 8e-30
Identities = 60/116 (51%), Positives = 79/116 (68%)
Frame = +2
Query: 14 RQKDRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKD 193
+Q+D++++KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+
Sbjct: 531 KQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKE 590
Query: 194 EFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 361
EF++ KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 591 EFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 124 bits (312), Expect = 7e-29
Identities = 64/115 (55%), Positives = 75/115 (65%)
Frame = +2
Query: 17 QKDRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDE 196
QKDRIAAKN+LESYA+ MK T+EDEKLKDKISE D+K I +KC E + WLD NQ A KDE
Sbjct: 531 QKDRIAAKNALESYAFNMKQTIEDEKLKDKISEEDKKKIQEKCDETVRWLDGNQTAEKDE 590
Query: 197 FDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 361
F++ KELE VCNPI+TK+YQ GPT+EEVD
Sbjct: 591 FEHRQKELESVCNPIITKLYQSAGGMPGGMPGGMPGGAPGAGSTG-GGPTIEEVD 644
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 124 bits (311), Expect = 9e-29
Identities = 61/118 (51%), Positives = 78/118 (66%), Gaps = 3/118 (2%)
Frame = +2
Query: 17 QKDRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDE 196
Q+D+++AKN LESYA+ MK+TVEDEKLK KIS+ D++ I+DKC E IGWLDKNQ A ++E
Sbjct: 532 QRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKQKILDKCNEVIGWLDKNQTAEREE 591
Query: 197 FDYHYKELEKVCNPIMTKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 361
F++ KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 592 FEHQQKELEKVCNPIITKLYQSAGGMPGGMPEGMPGGFPGAGAAPGGGSSGPTIEEVD 649
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 123 bits (308), Expect = 2e-28
Identities = 60/120 (50%), Positives = 79/120 (65%), Gaps = 5/120 (4%)
Frame = +2
Query: 17 QKDRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDE 196
Q+D++++KNSLESYA+ MK+TVEDEKL+ KIS+ D+ I++KC E IGWLDKNQ A K+E
Sbjct: 532 QRDKVSSKNSLESYAFNMKSTVEDEKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKEE 591
Query: 197 FDYHYKELEKVCNPIMTKMYQ-----XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 361
+++H KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 592 YEHHQKELEKVCNPIITKLYQGAGGMPGGMPEGMAGGFPGAGGAAPGGGGSSGPTIEEVD 651
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 121 bits (304), Expect = 6e-28
Identities = 60/118 (50%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Frame = +2
Query: 17 QKDRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDE 196
Q+D+++AKN LESYA+ MK+TVEDEKLK KIS+ D+ I+DKC E I WLDKNQ A KDE
Sbjct: 532 QRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDE 591
Query: 197 FDYHYKELEKVCNPIMTKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 361
+++ K+LEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 592 YEHQQKDLEKVCNPIITKLYQSDGGMPGGMPDGMPGGFQELGAAPGGGSSGPTIEEVD 649
>sp|Q24789|HSP70_ECHGR Heat shock cognate 70 kDa protein (HSP70)
Length = 665
Score = 121 bits (304), Expect = 6e-28
Identities = 53/82 (64%), Positives = 70/82 (85%)
Frame = +2
Query: 14 RQKDRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKD 193
+Q+DR+AAKN LESYA+ MK+TVEDEK+K+KI ESDR+ I++KC+E + WLD NQQA K+
Sbjct: 533 KQRDRVAAKNGLESYAFSMKSTVEDEKVKEKIGESDRRRIMEKCEETVKWLDGNQQAEKE 592
Query: 194 EFDYHYKELEKVCNPIMTKMYQ 259
E+++ KELE VCNPI+ KMYQ
Sbjct: 593 EYEHRQKELESVCNPIIAKMYQ 614
>sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein
Length = 654
Score = 120 bits (301), Expect = 1e-27
Identities = 59/116 (50%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Frame = +2
Query: 17 QKDRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDE 196
Q+D++ AKNSLESY Y MK TVEDEK+K KISE D+K I+ KC E + W+DKNQ A KD+
Sbjct: 539 QRDKVQAKNSLESYCYNMKQTVEDEKVKGKISEEDKKTIIKKCNETVEWVDKNQTAEKDQ 598
Query: 197 FDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQ-GPTVEEVD 361
+++ KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 599 YEHKQKELEKVCNPIITKLYQAGGGMPGGMPGGMPGGMPGSGSKASSGGPTIEEVD 654
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 120 bits (301), Expect = 1e-27
Identities = 59/120 (49%), Positives = 79/120 (65%), Gaps = 4/120 (3%)
Frame = +2
Query: 14 RQKDRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKD 193
+Q+D++++KNSL+SYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+
Sbjct: 531 KQRDKVSSKNSLKSYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKE 590
Query: 194 EFDYHYKELEKVCNPIMTKMYQ----XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 361
EF++ KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 591 EFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 650
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,642,722
Number of Sequences: 369166
Number of extensions: 447013
Number of successful extensions: 1801
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1700
length of database: 68,354,980
effective HSP length: 100
effective length of database: 49,881,480
effective search space used: 2294548080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)