Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_004_A02
(839 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q26065|ACT_PLAMG Actin, adductor muscle 553 e-157
sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3) 553 e-157
sp|P30163|ACT2_ONCVO Actin-2 553 e-157
sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cyt... 552 e-157
sp|P41340|ACT3_LIMPO Actin-3 552 e-157
sp|P92176|ACT2_LUMTE Actin-2 552 e-157
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 552 e-157
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 552 e-157
sp|O42161|ACTB_SALSA Actin, cytoplasmic 1 (Beta-actin) 552 e-157
sp|P68143|ACTB_OREMO Actin, cytoplasmic 1 (Beta-actin) >gi|... 552 e-157
>sp|Q26065|ACT_PLAMG Actin, adductor muscle
Length = 376
Score = 553 bits (1426), Expect = e-157
Identities = 270/279 (96%), Positives = 276/279 (98%)
Frame = +1
Query: 1 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 180
SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 15 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 181 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMY 360
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMY
Sbjct: 75 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMY 134
Query: 361 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 540
VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 135 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Query: 541 TERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNE 720
TERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNE
Sbjct: 195 TERGYSFTTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNE 254
Query: 721 RFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKD 837
RFRCPE+LFQPSFLG+ES GIHETTYNSIMKCDVDIRKD
Sbjct: 255 RFRCPESLFQPSFLGMESAGIHETTYNSIMKCDVDIRKD 293
>sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3)
Length = 375
Score = 553 bits (1425), Expect = e-157
Identities = 270/279 (96%), Positives = 275/279 (98%)
Frame = +1
Query: 1 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 180
SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 14 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 73
Query: 181 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMY 360
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMY
Sbjct: 74 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 133
Query: 361 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 540
VAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 134 VAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 193
Query: 541 TERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNE 720
TERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TAS+SSSLEKSYELPDGQVITIGNE
Sbjct: 194 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATASSSSSLEKSYELPDGQVITIGNE 253
Query: 721 RFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKD 837
RFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKD
Sbjct: 254 RFRCPEALFQPSFLGMESSGIHETTYNSIMKCDVDIRKD 292
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 553 bits (1424), Expect = e-157
Identities = 268/279 (96%), Positives = 275/279 (98%)
Frame = +1
Query: 1 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 180
SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 15 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 181 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMY 360
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMY
Sbjct: 75 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 134
Query: 361 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 540
VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 135 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Query: 541 TERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNE 720
TERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVIT+GNE
Sbjct: 195 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNE 254
Query: 721 RFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKD 837
RFRCPEALFQPSFLG+ES GIHETTYNSIMKCD+DIRKD
Sbjct: 255 RFRCPEALFQPSFLGMESAGIHETTYNSIMKCDIDIRKD 293
>sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cytoplasmic beta actin)
Length = 375
Score = 552 bits (1423), Expect = e-157
Identities = 269/279 (96%), Positives = 275/279 (98%)
Frame = +1
Query: 1 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 180
SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 14 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 73
Query: 181 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMY 360
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMY
Sbjct: 74 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 133
Query: 361 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 540
VAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 134 VAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 193
Query: 541 TERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNE 720
TERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNE
Sbjct: 194 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNE 253
Query: 721 RFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKD 837
RFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKD
Sbjct: 254 RFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKD 292
>sp|P41340|ACT3_LIMPO Actin-3
Length = 376
Score = 552 bits (1423), Expect = e-157
Identities = 269/279 (96%), Positives = 275/279 (98%)
Frame = +1
Query: 1 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 180
SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 15 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 181 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMY 360
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMY
Sbjct: 75 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 134
Query: 361 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 540
VAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 135 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Query: 541 TERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNE 720
TERGYSFTTTAEREIVRDIKEKLCY+ALDFD EM TA++SSSLEKSYELPDGQVITIGNE
Sbjct: 195 TERGYSFTTTAEREIVRDIKEKLCYVALDFDQEMATAASSSSLEKSYELPDGQVITIGNE 254
Query: 721 RFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKD 837
RFRCPEALFQPSFLG+ES GIHETTYNSIMKCD+DIRKD
Sbjct: 255 RFRCPEALFQPSFLGMESSGIHETTYNSIMKCDIDIRKD 293
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 552 bits (1423), Expect = e-157
Identities = 270/279 (96%), Positives = 275/279 (98%)
Frame = +1
Query: 1 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 180
SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 15 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 181 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMY 360
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMY
Sbjct: 75 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 134
Query: 361 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 540
VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 135 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Query: 541 TERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNE 720
TERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TASASSSLEKSYELPDGQVITIGNE
Sbjct: 195 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMNTASASSSLEKSYELPDGQVITIGNE 254
Query: 721 RFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKD 837
RFRCPEA+F SFLG+ESVGIHETTYNSIMKCDVDIRKD
Sbjct: 255 RFRCPEAMFHASFLGMESVGIHETTYNSIMKCDVDIRKD 293
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 552 bits (1423), Expect = e-157
Identities = 268/279 (96%), Positives = 275/279 (98%)
Frame = +1
Query: 1 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 180
SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 15 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 181 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMY 360
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMY
Sbjct: 75 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 134
Query: 361 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 540
VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKIL
Sbjct: 135 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKIL 194
Query: 541 TERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNE 720
TERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNE
Sbjct: 195 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNE 254
Query: 721 RFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKD 837
RFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKD
Sbjct: 255 RFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKD 293
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 552 bits (1423), Expect = e-157
Identities = 268/279 (96%), Positives = 276/279 (98%)
Frame = +1
Query: 1 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 180
SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 15 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 181 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMY 360
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMY
Sbjct: 75 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 134
Query: 361 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 540
VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKIL
Sbjct: 135 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKIL 194
Query: 541 TERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNE 720
TERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQVITIGNE
Sbjct: 195 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDGQVITIGNE 254
Query: 721 RFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKD 837
RFRCPEALFQPSFLG+E+ GIHETTYNSIMKCDVDIRKD
Sbjct: 255 RFRCPEALFQPSFLGMEAAGIHETTYNSIMKCDVDIRKD 293
>sp|O42161|ACTB_SALSA Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 552 bits (1422), Expect = e-157
Identities = 269/279 (96%), Positives = 275/279 (98%)
Frame = +1
Query: 1 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 180
SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 14 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 73
Query: 181 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMY 360
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMY
Sbjct: 74 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 133
Query: 361 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 540
VAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 134 VAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 193
Query: 541 TERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNE 720
TERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNE
Sbjct: 194 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNE 253
Query: 721 RFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKD 837
RFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKD
Sbjct: 254 RFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKD 292
>sp|P68143|ACTB_OREMO Actin, cytoplasmic 1 (Beta-actin)
sp|P68142|ACT1_FUGRU Actin, cytoplasmic 1 (Beta-actin-1)
Length = 375
Score = 552 bits (1422), Expect = e-157
Identities = 269/279 (96%), Positives = 275/279 (98%)
Frame = +1
Query: 1 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 180
SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 14 SGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 73
Query: 181 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMY 360
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMY
Sbjct: 74 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 133
Query: 361 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 540
VAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 134 VAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 193
Query: 541 TERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNE 720
TERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNE
Sbjct: 194 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNE 253
Query: 721 RFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKD 837
RFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKD
Sbjct: 254 RFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKD 292
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,908,286
Number of Sequences: 369166
Number of extensions: 2014444
Number of successful extensions: 6529
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6369
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8197207050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)