Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_003_P16
(406 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9V3A4|CSUP_DROME Catecholamines up protein 99 2e-21
sp|Q9XTQ7|KE4L_CAEEL Hypothetical Ke4-like protein H13N06.5... 93 2e-19
sp|Q31125|KE4_MOUSE Zinc transporter SLC39A7 (Solute carrie... 85 5e-17
sp|Q92504|KE4_HUMAN Zinc transporter SLC39A7 (Solute carrie... 82 5e-16
sp|Q9XUC4|YGJK_CAEEL Hypothetical protein T28F3.3 in chromo... 74 1e-13
sp|Q9VAF0|Y816_DROME Hypothetical protein CG7816 61 1e-09
sp|Q9VSL7|FOI_DROME Zinc transporter foi precursor (Fear-of... 57 1e-08
sp|P40544|YIC3_YEAST Hypothetical 37.4 kDa protein in IRR1-... 50 2e-06
sp|Q5R9M9|S39A6_PONPY Zinc transporter SLC39A6 precursor (S... 42 4e-04
sp|Q13433|S39A6_HUMAN Zinc transporter SLC39A6 precursor (S... 42 4e-04
>sp|Q9V3A4|CSUP_DROME Catecholamines up protein
Length = 449
Score = 99.4 bits (246), Expect = 2e-21
Identities = 51/84 (60%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 AILLQLVTAVGAMLGTVLSLLAQDIGTSST-WILPFTAGGFIYISTVSVLPELLKNHSTF 179
A+LLQLVTA+GA+ GT L+LL G S W+LPFTAGGFIYI+TVSVLPELL+ +
Sbjct: 366 AMLLQLVTALGALAGTALALLGAGGGDGSAPWVLPFTAGGFIYIATVSVLPELLEESTKL 425
Query: 180 SQSISEIIAMVTGVGMMVAIAYFE 251
QS+ EI A++TGV +M+ IA FE
Sbjct: 426 KQSLKEIFALLTGVALMIVIAKFE 449
>sp|Q9XTQ7|KE4L_CAEEL Hypothetical Ke4-like protein H13N06.5 in chromosome X
Length = 515
Score = 93.2 bits (230), Expect = 2e-19
Identities = 48/88 (54%), Positives = 68/88 (77%), Gaps = 5/88 (5%)
Frame = +3
Query: 3 AILLQLVTAVGAMLGTVLSLLAQDI-----GTSSTWILPFTAGGFIYISTVSVLPELLKN 167
A+L+QLVTA+GA+ G V+SL + D +S+W+LPFTAGGFIYI+TVSV+PELL+N
Sbjct: 429 AMLIQLVTALGALSGCVISLFSADADALADAAASSWVLPFTAGGFIYIATVSVIPELLEN 488
Query: 168 HSTFSQSISEIIAMVTGVGMMVAIAYFE 251
S+F Q++ EI A++TG+ +M IA +E
Sbjct: 489 -SSFFQTVKEIFAILTGIFLMYLIAIYE 515
>sp|Q31125|KE4_MOUSE Zinc transporter SLC39A7 (Solute carrier family 39 member 7)
(Histidine-rich membrane protein Ke4)
Length = 476
Score = 85.1 bits (209), Expect = 5e-17
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 8/91 (8%)
Frame = +3
Query: 3 AILLQLVTAVGAMLGTVLSLLAQ------DI--GTSSTWILPFTAGGFIYISTVSVLPEL 158
A+ LQLVTA+GA+ GT +LL + D+ G W+LPFTAGGFIY++TVSVLPEL
Sbjct: 387 AMRLQLVTAIGALAGTACALLTEGGAVDSDVAGGAGPGWVLPFTAGGFIYVATVSVLPEL 446
Query: 159 LKNHSTFSQSISEIIAMVTGVGMMVAIAYFE 251
L+ S QS+ E++ ++ GV MMV IA+ E
Sbjct: 447 LREASPL-QSLLEVLGLLGGVAMMVLIAHLE 476
>sp|Q92504|KE4_HUMAN Zinc transporter SLC39A7 (Solute carrier family 39 member 7)
(Histidine-rich membrane protein Ke4)
Length = 469
Score = 81.6 bits (200), Expect = 5e-16
Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 8/91 (8%)
Frame = +3
Query: 3 AILLQLVTAVGAMLGTVLSLLAQDIGTSST--------WILPFTAGGFIYISTVSVLPEL 158
A+ LQL+TAVGA+ GT +LL + S W+LPFTAGGFIY++TVSVLPEL
Sbjct: 380 AMRLQLLTAVGALAGTACALLTEGGAVGSEIAGGAGPGWVLPFTAGGFIYVATVSVLPEL 439
Query: 159 LKNHSTFSQSISEIIAMVTGVGMMVAIAYFE 251
L+ S QS+ E++ ++ GV MMV IA+ E
Sbjct: 440 LREASPL-QSLLEVLGLLGGVIMMVLIAHLE 469
>sp|Q9XUC4|YGJK_CAEEL Hypothetical protein T28F3.3 in chromosome IV
Length = 393
Score = 73.9 bits (180), Expect = 1e-13
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 13/96 (13%)
Frame = +3
Query: 3 AILLQLVTAVGAMLGTVLSLLAQDIGT-----SSTWILPFTAGGFIYISTVSVLPELLK- 164
AI LQ VTA+GA+ G V SLL + G+ ++ I+PFTAGGFIYI+TVSV+PELL+
Sbjct: 298 AIRLQAVTALGAITGCVFSLLVSNPGSLNNDADTSAIMPFTAGGFIYIATVSVVPELLES 357
Query: 165 -NHSTFS------QSISEIIAMVTGVGMMVAIAYFE 251
+H+ S QS+ ++A+ GVGMM ++ E
Sbjct: 358 GDHNNLSKVAKMAQSLVHVLAICMGVGMMYIVSLVE 393
>sp|Q9VAF0|Y816_DROME Hypothetical protein CG7816
Length = 355
Score = 60.8 bits (146), Expect = 1e-09
Identities = 29/79 (36%), Positives = 54/79 (68%), Gaps = 4/79 (5%)
Frame = +3
Query: 15 QLVTAVGAMLGTVLSLLAQDIGTS----STWILPFTAGGFIYISTVSVLPELLKNHSTFS 182
QL+TA +LG ++++ + ++ ++WI+PFTAGGF++I+ V+VLP+LLK
Sbjct: 272 QLLTAGAGLLGALVAIGGSGVTSAMEARTSWIMPFTAGGFLHIALVTVLPDLLKEEER-K 330
Query: 183 QSISEIIAMVTGVGMMVAI 239
+SI +++A+V G+ +M +
Sbjct: 331 ESIKQLLALVFGIALMAVM 349
>sp|Q9VSL7|FOI_DROME Zinc transporter foi precursor (Fear-of-intimacy protein) (Kastchen
protein)
Length = 706
Score = 57.0 bits (136), Expect = 1e-08
Identities = 26/83 (31%), Positives = 48/83 (57%)
Frame = +3
Query: 3 AILLQLVTAVGAMLGTVLSLLAQDIGTSSTWILPFTAGGFIYISTVSVLPELLKNHSTFS 182
A+ L+T V + +G + + + W+ AG FIYI+ V ++PE+ +H +
Sbjct: 605 AVYYNLLTGVLSFIGMIFGIAFGQSQDVAQWMFAVAAGLFIYIALVDMMPEISASHKSLG 664
Query: 183 QSISEIIAMVTGVGMMVAIAYFE 251
Q + +I+ M++GVG+M+ IA +E
Sbjct: 665 QFLLQILGMLSGVGIMLLIALYE 687
>sp|P40544|YIC3_YEAST Hypothetical 37.4 kDa protein in IRR1-TIM44 intergenic region
Length = 346
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 11/72 (15%)
Frame = +3
Query: 3 AILLQLVTAVGAMLGTVLSLLAQDIGTSS-----------TWILPFTAGGFIYISTVSVL 149
AI Q VTA GA++GT + +IG +S +LPFTAGG IYI+T SV+
Sbjct: 248 AIRAQAVTAFGAVVGTSIGCWMNEIGNNSHKATSSSANASELMLPFTAGGLIYIATTSVV 307
Query: 150 PELLKNHSTFSQ 185
P++L + + S+
Sbjct: 308 PQILHSSAPDSK 319
>sp|Q5R9M9|S39A6_PONPY Zinc transporter SLC39A6 precursor (Solute carrier family 39 member
6)
Length = 743
Score = 42.4 bits (98), Expect = 4e-04
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Frame = +3
Query: 3 AILLQLVTAVGAMLGTVLSLLAQDIGTS-STWILPFTAGGFIYISTVSVLPELLKNH--- 170
A+L ++A+ A LG + + S WI TAG F+Y++ V ++PE+L N
Sbjct: 645 AVLYNALSAMLAYLGMATGIFIGHYAENVSMWIFALTAGLFMYVALVDMVPEMLHNDASD 704
Query: 171 ---STFSQSISEIIAMVTGVGMMVAIAYFE 251
S + + M+ G G+M+ I+ FE
Sbjct: 705 HGCSRWGYFFLQNAGMLLGFGIMLLISIFE 734
>sp|Q13433|S39A6_HUMAN Zinc transporter SLC39A6 precursor (Solute carrier family 39 member
6) (Estrogen regulated protein LIV-1)
Length = 749
Score = 42.4 bits (98), Expect = 4e-04
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Frame = +3
Query: 3 AILLQLVTAVGAMLGTVLSLLAQDIGTS-STWILPFTAGGFIYISTVSVLPELLKNH--- 170
A+L ++A+ A LG + + S WI TAG F+Y++ V ++PE+L N
Sbjct: 651 AVLYNALSAMLAYLGMATGIFIGHYAENVSMWIFALTAGLFMYVALVDMVPEMLHNDASD 710
Query: 171 ---STFSQSISEIIAMVTGVGMMVAIAYFE 251
S + + M+ G G+M+ I+ FE
Sbjct: 711 HGCSRWGYFFLQNAGMLLGFGIMLLISIFE 740
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,489,475
Number of Sequences: 369166
Number of extensions: 678186
Number of successful extensions: 1698
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1692
length of database: 68,354,980
effective HSP length: 98
effective length of database: 50,250,950
effective search space used: 1809034200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)