Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_003_P05
(567 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase 213 3e-55
sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase 212 5e-55
sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle... 176 3e-44
sp|P53448|ALDOC_CARAU Fructose-bisphosphate aldolase C (Bra... 176 3e-44
sp|P00883|ALDOA_RABIT Fructose-bisphosphate aldolase A (Mus... 173 3e-43
sp|P05064|ALDOA_MOUSE Fructose-bisphosphate aldolase A (Mus... 172 5e-43
sp|P05065|ALDOA_RAT Fructose-bisphosphate aldolase A (Muscl... 172 7e-43
sp|P04075|ALDOA_HUMAN Fructose-bisphosphate aldolase A (Mus... 171 9e-43
sp|P09117|ALDOC_RAT Fructose-bisphosphate aldolase C (Brain... 169 4e-42
sp|P53449|ALDOC_CHICK Fructose-bisphosphate aldolase C (Bra... 168 1e-41
>sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase
Length = 363
Score = 213 bits (541), Expect = 3e-55
Identities = 106/138 (76%), Positives = 117/138 (84%)
Frame = +2
Query: 2 GTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLN 181
GTLLKPNMVT GQSCT KY++E NA ATV+ALQRTVP AV GV FLSGGQSE DAT NLN
Sbjct: 226 GTLLKPNMVTCGQSCTKKYSVEDNARATVEALQRTVPVAVPGVVFLSGGQSELDATRNLN 285
Query: 182 AINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDG 361
AINKY G+KPW L+FSFGRALQAS + AW+GK ENVKA Q + L LA ANGAA++GKF+G
Sbjct: 286 AINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQLAKANGAASLGKFEG 345
Query: 362 NLKTAAGGKSLFVANHAY 415
LKTAAG KSLFVANHAY
Sbjct: 346 ELKTAAGQKSLFVANHAY 363
>sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase
Length = 363
Score = 212 bits (540), Expect = 5e-55
Identities = 107/138 (77%), Positives = 116/138 (84%)
Frame = +2
Query: 2 GTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLN 181
GTLLKPNMVTAGQ+C YT ++NA ATV+ALQRTVPPAV G+TFLSGGQSE DAT NLN
Sbjct: 226 GTLLKPNMVTAGQACKKAYTPQENALATVRALQRTVPPAVPGITFLSGGQSELDATKNLN 285
Query: 182 AINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDG 361
INK G KPW LTFSFGRALQASVL WKGKKENV AAQ++LL LA ANGAAAVGKF+G
Sbjct: 286 EINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEG 345
Query: 362 NLKTAAGGKSLFVANHAY 415
N+ T G KSLFVANHAY
Sbjct: 346 NMGTTLGDKSLFVANHAY 363
>sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle type
Length = 363
Score = 176 bits (447), Expect = 3e-44
Identities = 91/138 (65%), Positives = 106/138 (76%)
Frame = +2
Query: 2 GTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLN 181
GTLLKPNMVT G + EQ A AT+ AL+RTVPPAV G+TFLSGGQSE DA+I+LN
Sbjct: 226 GTLLKPNMVTVGTAAPASTRPEQVAMATLTALRRTVPPAVPGITFLSGGQSEEDASIHLN 285
Query: 182 AINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDG 361
AINK H KPW LTFS+GRALQASVL+AW GKKEN+KAAQD+L+ A NG A+ G++
Sbjct: 286 AINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYKP 345
Query: 362 NLKTAAGGKSLFVANHAY 415
AA G+SLFVANHAY
Sbjct: 346 TGTGAAAGESLFVANHAY 363
>sp|P53448|ALDOC_CARAU Fructose-bisphosphate aldolase C (Brain-type aldolase)
Length = 363
Score = 176 bits (447), Expect = 3e-44
Identities = 90/138 (65%), Positives = 106/138 (76%)
Frame = +2
Query: 2 GTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLN 181
GTLLKPNMVTAG SC TK++ ++ A ATV AL+RTVPPAV GVTFLSGGQSE +A+INLN
Sbjct: 226 GTLLKPNMVTAGHSCPTKFSNQEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLN 285
Query: 182 AINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDG 361
AIN KPW LTFS+GRALQAS L AW+G KEN KAA ++ L A ANG AA GK+
Sbjct: 286 AINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVS 345
Query: 362 NLKTAAGGKSLFVANHAY 415
+ + G+SL+VANHAY
Sbjct: 346 SGMDGSAGQSLYVANHAY 363
>sp|P00883|ALDOA_RABIT Fructose-bisphosphate aldolase A (Muscle-type aldolase)
Length = 364
Score = 173 bits (438), Expect = 3e-43
Identities = 90/139 (64%), Positives = 108/139 (77%), Gaps = 1/139 (0%)
Frame = +2
Query: 2 GTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLN 181
GTLLKPNMVT G +CT KY+ E+ A ATV AL+RTVPPAV GVTFLSGGQSE +A+INLN
Sbjct: 226 GTLLKPNMVTPGHACTQKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLN 285
Query: 182 AINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDG 361
AINK KPW LTFS+GRALQAS L+AW GKKEN+KAAQ++ + A AN A GK+
Sbjct: 286 AINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTP 345
Query: 362 NLKT-AAGGKSLFVANHAY 415
+ + AA +SLF++NHAY
Sbjct: 346 SGQAGAAASESLFISNHAY 364
>sp|P05064|ALDOA_MOUSE Fructose-bisphosphate aldolase A (Muscle-type aldolase) (Aldolase
1)
Length = 364
Score = 172 bits (436), Expect = 5e-43
Identities = 89/139 (64%), Positives = 109/139 (78%), Gaps = 1/139 (0%)
Frame = +2
Query: 2 GTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLN 181
GTLLKPNMVT G +CT K++ E+ A ATV AL+RTVPPAV GVTFLSGGQSE +A+INLN
Sbjct: 226 GTLLKPNMVTPGHACTQKFSNEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLN 285
Query: 182 AINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDG 361
AINK KPW LTFS+GRALQAS L+AW GKKEN+KAAQ++ + A AN A GK+
Sbjct: 286 AINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTP 345
Query: 362 NLKT-AAGGKSLFVANHAY 415
+ ++ AA +SLF++NHAY
Sbjct: 346 SGQSGAAASESLFISNHAY 364
>sp|P05065|ALDOA_RAT Fructose-bisphosphate aldolase A (Muscle-type aldolase)
Length = 364
Score = 172 bits (435), Expect = 7e-43
Identities = 89/139 (64%), Positives = 109/139 (78%), Gaps = 1/139 (0%)
Frame = +2
Query: 2 GTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLN 181
GTLLKPNMVT G +CT K++ E+ A ATV AL+RTVPPAV GVTFLSGGQSE +A+INLN
Sbjct: 226 GTLLKPNMVTPGHACTQKFSNEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLN 285
Query: 182 AINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDG 361
AINK KPW LTFS+GRALQAS L+AW GKKEN+KAAQ++ + A AN A GK+
Sbjct: 286 AINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTP 345
Query: 362 NLKT-AAGGKSLFVANHAY 415
+ ++ AA +SLF++NHAY
Sbjct: 346 SGQSGAAASESLFISNHAY 364
>sp|P04075|ALDOA_HUMAN Fructose-bisphosphate aldolase A (Muscle-type aldolase) (Lung
cancer antigen NY-LU-1)
Length = 364
Score = 171 bits (434), Expect = 9e-43
Identities = 89/139 (64%), Positives = 108/139 (77%), Gaps = 1/139 (0%)
Frame = +2
Query: 2 GTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLN 181
GTLLKPNMVT G +CT K++ E+ A ATV AL+RTVPPAV G+TFLSGGQSE +A+INLN
Sbjct: 226 GTLLKPNMVTPGHACTQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLN 285
Query: 182 AINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDG 361
AINK KPW LTFS+GRALQAS L+AW GKKEN+KAAQ++ + A AN A GK+
Sbjct: 286 AINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTP 345
Query: 362 NLKT-AAGGKSLFVANHAY 415
+ + AA +SLFV+NHAY
Sbjct: 346 SGQAGAAASESLFVSNHAY 364
>sp|P09117|ALDOC_RAT Fructose-bisphosphate aldolase C (Brain-type aldolase)
Length = 363
Score = 169 bits (428), Expect = 4e-42
Identities = 83/138 (60%), Positives = 105/138 (76%)
Frame = +2
Query: 2 GTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLN 181
GTLLKPNMVT G +C KY+ E+ A ATV AL+RTVPPAV GVTFLSGGQSE +A++NLN
Sbjct: 226 GTLLKPNMVTPGHACPIKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLN 285
Query: 182 AINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDG 361
AIN+ +PW LTFS+GRALQAS L AW+G+++N AA ++ + A NG AA GK++G
Sbjct: 286 AINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEG 345
Query: 362 NLKTAAGGKSLFVANHAY 415
+ A +SL+VANHAY
Sbjct: 346 SGDGGAAAQSLYVANHAY 363
>sp|P53449|ALDOC_CHICK Fructose-bisphosphate aldolase C (Brain-type aldolase)
Length = 137
Score = 168 bits (425), Expect = 1e-41
Identities = 85/137 (62%), Positives = 106/137 (77%), Gaps = 1/137 (0%)
Frame = +2
Query: 8 LLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQSESDATINLNAI 187
LLKPNMVT G SC TKY+ E+ A ATV AL+RTVPPAV GVTFLSGGQSE +A+INLNAI
Sbjct: 1 LLKPNMVTPGHSCPTKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAI 60
Query: 188 NKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDGN- 364
N +PW LTFS+GRALQAS L AW+G+++N AA ++ + A NG AA+GK++G+
Sbjct: 61 NTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSG 120
Query: 365 LKTAAGGKSLFVANHAY 415
+ A G+SL+VANHAY
Sbjct: 121 DDSGAAGQSLYVANHAY 137
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,287,716
Number of Sequences: 369166
Number of extensions: 1448589
Number of successful extensions: 3943
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3911
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 4127973360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)