Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_003_J10
(925 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P83563|ALL6_APIME Allergen Api m 6 52 2e-06
sp|P35448|TSP1_XENLA Thrombospondin-1 precursor 51 5e-06
sp|Q13591|SEM5A_HUMAN Semaphorin-5A precursor (Semaphorin F... 50 1e-05
sp|O88799|ZAN_MOUSE Zonadhesin precursor 49 2e-05
sp|P98167|SSPO_BOVIN SCO-spondin 49 2e-05
sp|Q62217|SEM5A_MOUSE Semaphorin-5A precursor (Semaphorin F... 49 3e-05
sp|Q4VC17|ATS18_MOUSE ADAMTS-18 precursor (A disintegrin an... 49 3e-05
sp|O75443|TECTA_HUMAN Alpha-tectorin precursor 47 6e-05
sp|O08523|TECTA_MOUSE Alpha-tectorin precursor 47 8e-05
sp|Q69Z28|ATS16_MOUSE ADAMTS-16 precursor (A disintegrin an... 47 8e-05
>sp|P83563|ALL6_APIME Allergen Api m 6
Length = 71
Score = 52.4 bits (124), Expect = 2e-06
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = +3
Query: 243 CENNVAFSLKNSFCEQTCDDVINKQHPTHICDEGCKCQSGYVRNSNNTCVPTSEC 407
C +N FS + C++ C +V+ K IC GC C+ GY+RN CVP S+C
Sbjct: 16 CPSNEIFSRCDGRCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKC 70
>sp|P35448|TSP1_XENLA Thrombospondin-1 precursor
Length = 1173
Score = 50.8 bits (120), Expect = 5e-06
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 54 CTKNICTKDCQWSDWKISTPCNVTCGQGIQILERTVAR-VAQYEGKDCQGSNRTEEMC 224
C K+ C + QW W + C VTCG G+Q ER QYEGKDC G ++C
Sbjct: 487 CQKDPCPINGQWGPWSLWDTCTVTCGGGMQKRERLCNNPKPQYEGKDCIGEPTDSQIC 544
Score = 44.7 bits (104), Expect = 4e-04
Identities = 27/100 (27%), Positives = 34/100 (34%), Gaps = 23/100 (23%)
Frame = +3
Query: 18 CNNCSCRQGKWICTKNIC-----------------------TKDCQWSDWKISTPCNVTC 128
C C+C+ IC K C + D WS W TPC+VTC
Sbjct: 339 CTECTCQNSATICRKVSCPLMPCTNATIPDGECCPRCWPSDSADDDWSPWSDWTPCSVTC 398
Query: 129 GQGIQILERTVARVAQYEGKDCQGSNRTEEMCYAATKCCE 248
G GI Q G+ C N E T+ C+
Sbjct: 399 GHGI-----------QQRGRSCDSLNNPCEGSSVQTRSCQ 427
Score = 41.2 bits (95), Expect = 0.004
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Frame = +3
Query: 15 DCNNCSCRQGKWICTKNICTKDCQ--------WSDWKISTPCNVTCGQG-IQILERTVAR 167
D N C +G + T++ +DC WS W + C+VTCG G I + +
Sbjct: 410 DSLNNPC-EGSSVQTRSCQIQDCDKRFKQDGGWSHWSPWSSCSVTCGSGQITRIRLCNSP 468
Query: 168 VAQYEGKDCQGSNRTEEMC 224
V Q GK C+G R + C
Sbjct: 469 VPQLNGKQCEGEGRENKPC 487
>sp|Q13591|SEM5A_HUMAN Semaphorin-5A precursor (Semaphorin F) (Sema F)
Length = 1074
Score = 49.7 bits (117), Expect = 1e-05
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +3
Query: 9 TKDCNNCSCRQGKWICTKN-----ICTKDCQWSDWKISTPCNVTCGQGIQILERTVAR-V 170
T+ C++ + + G W C C+++ W+ W +PC+ TCG G Q+ +R+ +
Sbjct: 567 TRSCDSPAPQCGGWQCEGPGMEIANCSRNGGWTPWTSWSPCSTTCGIGFQVRQRSCSNPT 626
Query: 171 AQYEGKDCQGSNRTEEMCYAATKC 242
++ G+ C G NR E C C
Sbjct: 627 PRHGGRVCVGQNREERYCNEHLLC 650
Score = 37.4 bits (85), Expect = 0.060
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 54 CTKNICTKDCQWSDWKISTPCNVTCGQGIQILERTVARVA-QYEGKDCQGSNRTEEMC 224
C C D WS W T C+ TCG G + R+ + A Y G C G + E +C
Sbjct: 833 CNTLPCPVDGVWSCWSPWTKCSATCGGGHYMRTRSCSNPAPAYGGDICLGLHTEEALC 890
Score = 33.5 bits (75), Expect = 0.87
Identities = 21/82 (25%), Positives = 28/82 (34%), Gaps = 11/82 (13%)
Frame = +3
Query: 12 KDCNNCSCRQGKWICTKN-----------ICTKDCQWSDWKISTPCNVTCGQGIQILERT 158
+ C+N + R G +C +C W+ W C CG GIQ R
Sbjct: 620 RSCSNPTPRHGGRVCVGQNREERYCNEHLLCPPHMFWTGWGPWERCTAQCGGGIQARRRI 679
Query: 159 VARVAQYEGKDCQGSNRTEEMC 224
G DC G N + C
Sbjct: 680 CE-----NGPDCAGCNVEYQSC 696
>sp|O88799|ZAN_MOUSE Zonadhesin precursor
Length = 5376
Score = 48.9 bits (115), Expect = 2e-05
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +3
Query: 243 CENNVAFSLKNSFCEQTCDDVINKQHPTHICDEGCKCQSGYVRNSNNTCVPTSEC 407
C N +SL C +TC + QH + C EGC+C G++ S + CVP+S+C
Sbjct: 1555 CPKNSRYSLCAKPCPETCHPISTTQHCSDKCVEGCECDPGFIL-SGSECVPSSQC 1608
Score = 48.9 bits (115), Expect = 2e-05
Identities = 41/138 (29%), Positives = 54/138 (39%), Gaps = 17/138 (12%)
Frame = +3
Query: 183 GKDCQGSNRTEEMCYAATKCCENNVAFSLKNSFCEQTCDDVINKQHPTH-----ICDEGC 347
G +CQ C T C + +S C+ +C D T C+EGC
Sbjct: 4484 GAECQDIEDGNSNCVEITVQCPAHSHYSKCLPPCQPSCSDPDGHCEGTSPEAPSTCEEGC 4543
Query: 348 KCQSGYVRNSNNTCVPTSECFRCEVNGV------TW------QNGQTKKDVYACRLFICV 491
C+ YV SN+ CVP+SEC + +GV TW +N K C F C
Sbjct: 4544 VCEPDYVL-SNDKCVPSSECGCKDAHGVLIPESKTWVSRGCTKNCTCKGGTVQCHDFSCP 4602
Query: 492 RGEIISKKLDITNGLPAC 545
G S+ LD G C
Sbjct: 4603 TG---SRCLDNNEGNSNC 4617
Score = 44.3 bits (103), Expect = 5e-04
Identities = 52/208 (25%), Positives = 79/208 (37%), Gaps = 32/208 (15%)
Frame = +3
Query: 27 CSCRQGKWICTKNICT-------KDCQWSDWK-----ISTPCNVTCGQGIQILERTVARV 170
C C+ G ++ KN C KD Q S K IS+ C+ C + +
Sbjct: 4663 CICQSG-YVLHKNKCMLRIHCDCKDFQGSLIKTGQTWISSGCSKIC-----TCKGGFFQC 4716
Query: 171 AQYE---GKDCQGSNRTEEMCYAATKCCENNVAFSLKNSFCEQTCDDVINKQHPTH---- 329
Y+ G C+ S C ++T C N ++ C +C + + T
Sbjct: 4717 QSYKCPSGTQCEESEDGSSNCVSSTMKCPANSLYTHCLPTCLPSCSNPDGRCEGTSHKAP 4776
Query: 330 -ICDEGCKCQSGYVRNSNNTCVPTSECFRCEVN------GVTW------QNGQTKKDVYA 470
C EGC CQ GY+ N +TCV ++C ++ G TW Q+ V
Sbjct: 4777 STCREGCVCQPGYLLN-KDTCVHKNQCGCKDIRGNIIPAGNTWISSDCTQSCACTDGVIQ 4835
Query: 471 CRLFICVRGEIISKKLDITNGLPACSLE 554
C+ F+C G D ++ A LE
Sbjct: 4836 CQNFVCPSGSHCQYNEDGSSDCAANKLE 4863
Score = 42.7 bits (99), Expect = 0.001
Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
Frame = +3
Query: 183 GKDCQGSNRTEEMCYAATKCCENNVAFSLKNSFCEQTCDDVINKQHPT--HICDEGCKCQ 356
G C+ + C T C N F+ C +C + P+ C EGC C
Sbjct: 3280 GTYCKNGDNGSSNCTEITLQCPTNSQFTDCLPSCVPSCSNRCEVTSPSVPSSCREGCLCN 3339
Query: 357 SGYVRNSNNTCVPTSECFRCEVNGVTWQNGQTKKDVYACRLFICVRGEI 503
G+V S + CVP ++C + G G+T + CV G I
Sbjct: 3340 HGFVF-SEDKCVPRTQCGCKDARGAIIPAGKTWTSKGCTQSCACVEGNI 3387
Score = 42.4 bits (98), Expect = 0.002
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 7/111 (6%)
Frame = +3
Query: 192 CQGSNRTEEMCYAATKCCENNVAFSLKNSFC-------EQTCDDVINKQHPTHICDEGCK 350
C+ ++ C T C + ++ C E C D+ K T C EGC
Sbjct: 3400 CKDNSEGSSTCTKITLQCPAHTQYTSCLPSCLPSCLDPEGLCKDISPKVPST--CKEGCV 3457
Query: 351 CQSGYVRNSNNTCVPTSECFRCEVNGVTWQNGQTKKDVYACRLFICVRGEI 503
CQSGYV NS+ CV +EC + G G+T + C+ G +
Sbjct: 3458 CQSGYVLNSDK-CVLRAECDCKDAQGALIPAGKTWTSPGCTQSCACMGGAV 3507
Score = 40.8 bits (94), Expect = 0.005
Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 8/154 (5%)
Frame = +3
Query: 126 CGQGIQILERTVARVAQYE---GKDCQGSNRTEEMCYAATKCCENNVAFSLKNSFCEQTC 296
C Q +E + R ++ G CQ C T C + +F+ C+ +C
Sbjct: 2539 CSQSCDCMEGVI-RCQNFQCPSGTYCQDIEDGTSNCANITLQCPAHSSFTNCLPPCQPSC 2597
Query: 297 DDVI-----NKQHPTHICDEGCKCQSGYVRNSNNTCVPTSECFRCEVNGVTWQNGQTKKD 461
D + C EGC C+ YV NN CVP EC + GV + +
Sbjct: 2598 SDPEGHCGGSTTKAPSACQEGCVCEPDYV-VLNNKCVPRIECGCKDAQGVLIPADKIWIN 2656
Query: 462 VYACRLFICVRGEIISKKLDITNGLPACSLEDEA 563
+ CV G I + +G ++D+A
Sbjct: 2657 KGCTQTCACVTGTIHCRDFQCPSGTYCKDIKDDA 2690
Score = 38.9 bits (89), Expect = 0.021
Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Frame = +3
Query: 192 CQGSNRTEEMCYAATKCCENNVAFSLKNSFCEQTCDDVI-----NKQHPTHICDEGCKCQ 356
CQ C + C + ++ C+ +C D + C EGC C+
Sbjct: 2803 CQDMEDGNSNCTSIPLQCPAHSHYTNCLPTCQPSCSDPDGHCEGSSTKAPSACKEGCVCE 2862
Query: 357 SGYVRNSNNTCVPTSECFRCEVNGVTWQNGQTKKDVYACRLFICVRGEIISKKLDITNGL 536
YV NN CVP EC + GV +T + + C G I +K ++G
Sbjct: 2863 PDYVM-LNNKCVPRIECGCKDTQGVLIPADKTWINRGCTQSCTCRGGAIQCQKYHCSSGT 2921
Query: 537 PACSLEDEA 563
+ED++
Sbjct: 2922 YCKDMEDDS 2930
Score = 38.5 bits (88), Expect = 0.027
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 282 CEQTCDDVINKQH-PTHICDEGCKCQSGYVRNSNNTCVPTSEC 407
C TC + + PT C EGC+CQSG++ S TCVP +C
Sbjct: 1954 CPATCLTLSTPRDCPTLPCVEGCECQSGHIL-SGTTCVPLRQC 1995
Score = 38.1 bits (87), Expect = 0.035
Identities = 38/142 (26%), Positives = 51/142 (35%), Gaps = 20/142 (14%)
Frame = +3
Query: 183 GKDCQGSNRTEEMCYAATKCCENNVAFSLKNSFCEQTCDD-------VINKQHPTHICDE 341
G C+ SN C + C + F+ C +C D + H C E
Sbjct: 2440 GTYCKNSNDGSSNCVKISLQCPAHSKFTDCLPPCHPSCSDPDGHCEGISTNAHSN--CKE 2497
Query: 342 GCKCQSGYVRNSNNTCVPTSECFRCEVN-------GVTW------QNGQTKKDVYACRLF 482
GC CQ GYV N+ CV EC C+ G W Q+ + V C+ F
Sbjct: 2498 GCVCQPGYVLR-NDKCVLRIEC-GCQHTQGGFIPAGKNWTSRGCSQSCDCMEGVIRCQNF 2555
Query: 483 ICVRGEIISKKLDITNGLPACS 548
C G DI +G C+
Sbjct: 2556 QCPSGTYCQ---DIEDGTSNCA 2574
Score = 37.4 bits (85), Expect = 0.060
Identities = 34/147 (23%), Positives = 57/147 (38%), Gaps = 5/147 (3%)
Frame = +3
Query: 27 CSCRQGKWICTKNICTKDCQWSDWKISTPCNVTCGQGIQILERTVARVAQYEGKDCQGSN 206
C C+ + + + D W + + C TC G ++ Y KD + N
Sbjct: 2998 CGCKDAQGV----LIPADKTWINRGCTQSC--TCKGGAIQCQKFQCPSETY-CKDIEDGN 3050
Query: 207 RTEEMCYAATKCCENNVAFSLKNSFCEQTCDDVI-----NKQHPTHICDEGCKCQSGYVR 371
C + C N F+ C+ +C + + + C EGC CQSGYV
Sbjct: 3051 SN---CTRISLQCPANSNFTSCLPSCQPSCSNTDVHCEGSSPNTLSSCREGCVCQSGYVL 3107
Query: 372 NSNNTCVPTSECFRCEVNGVTWQNGQT 452
+ N+ C+ ++C + G G+T
Sbjct: 3108 H-NDKCILRNQCGCKDAQGALIPEGKT 3133
Score = 37.0 bits (84), Expect = 0.078
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 6/113 (5%)
Frame = +3
Query: 183 GKDCQGSNRTEEMCYAATKCCENNVAFSLKNSFCEQTCDDV------INKQHPTHICDEG 344
G C+ + C T C + ++ FC +C D + + P+ C EG
Sbjct: 3757 GTYCKDNEDGNSNCAKITLQCPTHSNYTDCLPFCLPSCLDPSALCGGTSPKGPS-TCKEG 3815
Query: 345 CKCQSGYVRNSNNTCVPTSECFRCEVNGVTWQNGQTKKDVYACRLFICVRGEI 503
C CQ GYV + + C+ EC + G G+T + CV G I
Sbjct: 3816 CVCQPGYVLDKDK-CILKIECGCRDTQGAVIPAGKTWLSTGCIQSCACVEGTI 3867
Score = 36.6 bits (83), Expect = 0.10
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 5/112 (4%)
Frame = +3
Query: 183 GKDCQGSNRTEEMCYAATKCCENNVAFSLKNSFCEQTC---DDVINKQHPT--HICDEGC 347
G C+ + C T C + F+ C +C D + P C EGC
Sbjct: 3517 GTYCKDNEDGNSNCAKITLQCPAHSLFTNCLPPCLPSCLDPDGLCKGASPKVPSTCKEGC 3576
Query: 348 KCQSGYVRNSNNTCVPTSECFRCEVNGVTWQNGQTKKDVYACRLFICVRGEI 503
CQSGYV SNN C+ + C + +G +T + +C G I
Sbjct: 3577 ICQSGYVL-SNNKCLLRNRCGCKDAHGALIPEDKTWVSRGCTQSCVCTGGSI 3627
Score = 35.8 bits (81), Expect = 0.17
Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 17/119 (14%)
Frame = +3
Query: 183 GKDCQGSNRTEEMCYAATKCCENNVAFSLKNSFCEQTCDDVI-----NKQHPTHICDEGC 347
G C+ C T C + F+ C+ +C D + C EGC
Sbjct: 2920 GTYCKDMEDDSSSCATITLQCPAHSHFTNCLPPCQPSCLDSEGHCEGSTTKAPSACQEGC 2979
Query: 348 KCQSGYVRNSNNTCVPTSECFRCEVNGV------TW------QNGQTKKDVYACRLFIC 488
C+ YV NN CVP EC + GV TW Q+ K C+ F C
Sbjct: 2980 VCEPDYV-VLNNKCVPRIECGCKDAQGVLIPADKTWINRGCTQSCTCKGGAIQCQKFQC 3037
Score = 35.8 bits (81), Expect = 0.17
Identities = 37/160 (23%), Positives = 57/160 (35%), Gaps = 9/160 (5%)
Frame = +3
Query: 183 GKDCQGSNRTEEMCYAATKCCENNVAFSLKNSFCEQTCDDV------INKQHPTHICDEG 344
G C +N C C + ++ C +C D + + P+ C EG
Sbjct: 4604 GSRCLDNNEGNSNCVTYALKCPAHSLYTNCLPSCLPSCSDPEGLCGGTSPEVPS-TCKEG 4662
Query: 345 CKCQSGYVRNSNNTCVPTSECFRCEVNGVTWQNGQTKKDVYACRLFICVRGEIISKKLDI 524
C CQSGYV + N C+ C + G + GQT ++ C G +
Sbjct: 4663 CICQSGYVLHKNK-CMLRIHCDCKDFQGSLIKTGQTWISSGCSKICTCKGGFFQCQSYKC 4721
Query: 525 TNGLPACSLEDEA--LVNNGAKSIIND-YRCCYTAAIERC 635
+G ED + V++ K N Y C + C
Sbjct: 4722 PSGTQCEESEDGSSNCVSSTMKCPANSLYTHCLPTCLPSC 4761
Score = 35.4 bits (80), Expect = 0.23
Identities = 37/169 (21%), Positives = 57/169 (33%), Gaps = 8/169 (4%)
Frame = +3
Query: 21 NNCSCRQGKWICTKNICTKDCQWSDWKISTPCNVTC---GQGIQILERTVARVAQYEGKD 191
N C C+ + +D W +S C +C G IQ L G
Sbjct: 3593 NRCGCKDAHGA----LIPEDKTW----VSRGCTQSCVCTGGSIQCLSSQCP-----PGAY 3639
Query: 192 CQGSNRTEEMCYAATKCCENNVAFSLKNSFCEQTCDDV-----INKQHPTHICDEGCKCQ 356
C+ + C C N ++ C +C D + C EGC C
Sbjct: 3640 CKDNEDGSSNCARIPPQCPANSHYTDCFPPCPPSCSDPEGHCEASGPRVLSTCREGCLCN 3699
Query: 357 SGYVRNSNNTCVPTSECFRCEVNGVTWQNGQTKKDVYACRLFICVRGEI 503
G+V + + CVP EC + G +G+T + C+ G +
Sbjct: 3700 PGFVLD-RDKCVPRVECGCKDAQGALIPSGKTWTSPGCTQSCACMGGVV 3747
Score = 35.4 bits (80), Expect = 0.23
Identities = 43/171 (25%), Positives = 63/171 (36%), Gaps = 18/171 (10%)
Frame = +3
Query: 282 CEQTCDDVINKQHPTHICDEGCKCQSGYVRNSNNTCVPTSECFRCEVNGVTWQNGQ--TK 455
CEQT V + C EGC CQ GY N N CV + C + G G+ T
Sbjct: 3917 CEQTSPKVPST------CKEGCLCQPGYFLN-NGKCVLQTHCDCKDAEGGLVPAGKTWTS 3969
Query: 456 KD----------VYACRLFICVRGEIISKKLDITNGLPAC------SLEDEALVNNGAKS 587
KD C+ F C G D +G C ++ D L+ G ++
Sbjct: 3970 KDCTQSCACTGGAVQCQNFQCPLGTYCK---DSGDGSSNCTKIHKGAMGDGVLMAGGIRA 4026
Query: 588 IINDYRCCYTAAIERCKVKNVKVNQITLANGDPCKLIDGNFIQKTVCGGGC 740
+ +T+ + C + +N D ++ NF +VC GC
Sbjct: 4027 LQCPAHSHFTSCLPSCPP--------SCSNLDG-SCVESNFKAPSVCKKGC 4068
Score = 35.4 bits (80), Expect = 0.23
Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 5/112 (4%)
Frame = +3
Query: 183 GKDCQGSNRTEEMCYAATKCCENNVAFSLKNSFCEQTCDDVINKQHPTHI-----CDEGC 347
G C+ SN + C C + ++ C ++C D+ T C EGC
Sbjct: 4129 GTYCKESNDSSRTCAKIPLQCPAHSHYTNCLPACSRSCTDLDGHCEGTSPKVPSPCKEGC 4188
Query: 348 KCQSGYVRNSNNTCVPTSECFRCEVNGVTWQNGQTKKDVYACRLFICVRGEI 503
CQ GYV + N+ CV C + G G+T + CV G +
Sbjct: 4189 LCQPGYVVH-NHKCVLQIHCGCKDAQGGFVPAGKTWISRGCTQSCACVGGAV 4239
Score = 35.4 bits (80), Expect = 0.23
Identities = 29/130 (22%), Positives = 48/130 (36%), Gaps = 5/130 (3%)
Frame = +3
Query: 183 GKDCQGSNRTEEMCYAATKCCENNVAFSLKNSFCEQTCDDVINKQHPTHI-----CDEGC 347
G +C+ S C C + + C +C +V ++ T + C EGC
Sbjct: 4364 GTECKDSVDGGSNCTKIALQCPAHSHHTYCLPSCIPSCSNVNDRCESTSLQRPSTCIEGC 4423
Query: 348 KCQSGYVRNSNNTCVPTSECFRCEVNGVTWQNGQTKKDVYACRLFICVRGEIISKKLDIT 527
C SG+V S + CVP ++C + G G+ + C G +
Sbjct: 4424 LCHSGFV-FSKDKCVPRTQCGCKDSQGTLIPAGKNWITTGCSQRCTCTGGLVQCHDFQCP 4482
Query: 528 NGLPACSLED 557
+G +ED
Sbjct: 4483 SGAECQDIED 4492
Score = 35.0 bits (79), Expect = 0.30
Identities = 29/102 (28%), Positives = 38/102 (37%), Gaps = 29/102 (28%)
Frame = +3
Query: 330 ICDEGCKCQSGYVRNSNNTCVPTSECFRCEVN------GVTWQNGQTKKD------VYAC 473
+C +GC CQ GY+ N N+ CV +C + G TW + K + C
Sbjct: 4063 VCKKGCICQPGYLLN-NDKCVLRIQCGCKDTQGGLIPAGRTWISSDCTKSCSCMGGIIQC 4121
Query: 474 RLFICVRGEIISKKLD-----------------ITNGLPACS 548
R F C G + D TN LPACS
Sbjct: 4122 RDFQCPPGTYCKESNDSSRTCAKIPLQCPAHSHYTNCLPACS 4163
Score = 31.2 bits (69), Expect = 4.3
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 333 CDEGCKCQSGYVRNSNNTCVPTSECFRCEVNGVTWQNGQTKKDVYACRLFICVRGEI 503
C EGC CQ YV N+ CV S C + GV G+T + C++G +
Sbjct: 2375 CREGCICQPDYVL-LNDKCVLRSHCGCKDAQGVFIPAGKTWISEDCTQSCTCMKGSM 2430
Score = 31.2 bits (69), Expect = 4.3
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 333 CDEGCKCQSGYVRNSNNTCVPTSECFRCEVNGVTWQNGQT 452
C EGC C YV SN+ CV EC + GV G+T
Sbjct: 2735 CKEGCVCDPDYVL-SNDKCVLRIECGCKDAQGVLIPAGKT 2773
>sp|P98167|SSPO_BOVIN SCO-spondin
Length = 867
Score = 48.9 bits (115), Expect = 2e-05
Identities = 47/160 (29%), Positives = 63/160 (39%), Gaps = 12/160 (7%)
Frame = +3
Query: 54 CTKNICTKDCQWSDWKISTPCNVTCGQGIQILERTVARVAQYEGKDCQ----GSNRTEEM 221
C C +D W+ W +PC+ CG G+ R Q G+ C G T E
Sbjct: 21 CFAAACPEDGVWTSWSRWSPCSEPCG-GVTARHRE-CHPPQNGGRTCATLPGGPPSTRET 78
Query: 222 CYAATKCCENNVAFSLKNSF-----CEQTCDDVINKQ--HPTHIC-DEGCKCQSGYVRNS 377
C NV S + F C TCDD+ + P C GC C +G V +
Sbjct: 79 RPCPQDGCP-NVTCSGELVFHACVPCPLTCDDISGQATCPPDRPCGGPGCWCPAGQVLGA 137
Query: 378 NNTCVPTSECFRCEVNGVTWQNGQTKKDVYACRLFICVRG 497
CV +C C V+G + GQ K C+L +C G
Sbjct: 138 QGRCVWPRQC-PCLVDGSRYWPGQRVKT--DCQLCVCQDG 174
Score = 32.7 bits (73), Expect = 1.5
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = +3
Query: 15 DCNNCSCRQGK-WICTKNI-CTKDCQWSDWKISTPCNVTCG-QGIQILERTVARVAQY-E 182
DC C C+ G+ C ++ C +C WS W C CG + +Q R+
Sbjct: 165 DCQLCVCQDGRPRRCQPSLDCAVNCGWSAWSPWAECLGPCGSRSVQWSFRSPNNPRPAGR 224
Query: 183 GKDCQGSNRTEEMCYAATKCCE 248
G C+G +R C T+ CE
Sbjct: 225 GHQCRGLHRKARRC--QTEPCE 244
>sp|Q62217|SEM5A_MOUSE Semaphorin-5A precursor (Semaphorin F) (Sema F)
Length = 1077
Score = 48.5 bits (114), Expect = 3e-05
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = +3
Query: 9 TKDCNNCSCRQGKWICTK-----NICTKDCQWSDWKISTPCNVTCGQGIQILERTVAR-V 170
++ C+ + + G W C C+++ W+ W +PC+ TCG G Q+ +R+ +
Sbjct: 567 SRSCDRPAPQCGGWQCEGPRMEITNCSRNGGWTPWTSWSPCSTTCGIGFQVRQRSCSNPT 626
Query: 171 AQYEGKDCQGSNRTEEMCYAATKC 242
++ G+ C G NR E C C
Sbjct: 627 PRHGGRVCVGQNREERYCNEHLLC 650
Score = 36.6 bits (83), Expect = 0.10
Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 11/82 (13%)
Frame = +3
Query: 12 KDCNNCSCRQGKWICTKN-----------ICTKDCQWSDWKISTPCNVTCGQGIQILERT 158
+ C+N + R G +C +C W+ W C CG GIQ RT
Sbjct: 620 RSCSNPTPRHGGRVCVGQNREERYCNEHLLCPPHVFWTGWGPWERCTAQCGGGIQARRRT 679
Query: 159 VARVAQYEGKDCQGSNRTEEMC 224
G DC GSN C
Sbjct: 680 CE-----NGPDCAGSNVEYHPC 696
Score = 36.2 bits (82), Expect = 0.13
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 69 CTKDCQWSDWKISTPCNVTCGQGIQILERTVARVA-QYEGKDCQGSNRTEEMCYAAT 236
C D WS W + C+ TCG G + R+ + A Y G C G + E +C T
Sbjct: 838 CPVDGVWSCWSSWSKCSATCGGGHYMRTRSCSNPAPAYGGDICLGLHTEEALCNTQT 894
>sp|Q4VC17|ATS18_MOUSE ADAMTS-18 precursor (A disintegrin and metalloproteinase with
thrombospondin motifs 18) (ADAM-TS 18) (ADAM-TS18)
Length = 1219
Score = 48.5 bits (114), Expect = 3e-05
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +3
Query: 33 CRQGKWICTKNICTKDC--QWSDWKISTPCNVTCGQGIQILERTVAR-VAQYEGKDCQGS 203
CRQG+ + + + QWS W + C+ TCG G++ ER + QY GK C GS
Sbjct: 572 CRQGQCVKLGELGPRPIHGQWSAWSKWSECSRTCGGGVKFQERHCSNPKPQYGGKYCPGS 631
Query: 204 NRTEEMCYAATKCCENNVAFSLKNSFCEQTCDDVINK 314
+R ++C C EN++ F Q C + NK
Sbjct: 632 SRIYKLC-NINPCPENSL------DFRAQQCAEYNNK 661
>sp|O75443|TECTA_HUMAN Alpha-tectorin precursor
Length = 2155
Score = 47.4 bits (111), Expect = 6e-05
Identities = 26/84 (30%), Positives = 43/84 (51%)
Frame = +3
Query: 198 GSNRTEEMCYAATKCCENNVAFSLKNSFCEQTCDDVINKQHPTHICDEGCKCQSGYVRNS 377
G RT+ C + +C + +S+ S C TC D+ ++ C EGC+C G+V S
Sbjct: 583 GDWRTQTGCVSTVQCPSFS-HYSVCTSSCPDTCSDLTASRNCATPCTEGCECNQGFVL-S 640
Query: 378 NNTCVPTSECFRCEVNGVTWQNGQ 449
+ CVP +C C+ +G + G+
Sbjct: 641 TSQCVPLHKC-GCDFDGHYYTMGE 663
Score = 43.1 bits (100), Expect = 0.001
Identities = 39/163 (23%), Positives = 61/163 (37%)
Frame = +3
Query: 228 AATKCCENNVAFSLKNSFCEQTCDDVINKQHPTHICDEGCKCQSGYVRNSNNTCVPTSEC 407
+ T C N + S C+ C + K +H C EGC C +GYV N + +P S
Sbjct: 1367 SCTVTCPPNSHYESCVSVCQPRCAAIRLKSDCSHYCVEGCHCDAGYVLNGKSCILPHS-- 1424
Query: 408 FRCEVNGVTWQNGQTKKDVYACRLFICVRGEIISKKLDITNGLPACSLEDEALVNNGAKS 587
C +G ++ Q + R C R +I + D C ++E + NG
Sbjct: 1425 CGCYSDGKYYEPKQLFWNSDCTRRCRCFRRNVI--QCDPRQ----CKSDEECALRNGV-- 1476
Query: 588 IINDYRCCYTAAIERCKVKNVKVNQITLANGDPCKLIDGNFIQ 716
R C++ C A G + DG F++
Sbjct: 1477 -----RGCFSTKTSYC----------LAAGGGVFRTFDGAFLR 1504
Score = 35.0 bits (79), Expect = 0.30
Identities = 21/72 (29%), Positives = 29/72 (40%)
Frame = +3
Query: 282 CEQTCDDVINKQHPTHICDEGCKCQSGYVRNSNNTCVPTSECFRCEVNGVTWQNGQTKKD 461
C +TC+ + C EGC+C GY + CV SEC C G +T
Sbjct: 996 CTETCETLTLGPICVDSCSEGCQCDEGYAL-LGSQCVTRSEC-GCNFEGHQLATNETFWV 1053
Query: 462 VYACRLFICVRG 497
C++F G
Sbjct: 1054 DLDCQIFCYCSG 1065
>sp|O08523|TECTA_MOUSE Alpha-tectorin precursor
Length = 2155
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/84 (30%), Positives = 42/84 (50%)
Frame = +3
Query: 198 GSNRTEEMCYAATKCCENNVAFSLKNSFCEQTCDDVINKQHPTHICDEGCKCQSGYVRNS 377
G R + C + +C + +S+ S C TC D+ Q+ C EGC+C G+V S
Sbjct: 583 GDWRIQTGCVSTVRCPSFS-HYSVCTSSCPDTCSDLTASQNCATPCTEGCECNEGFVL-S 640
Query: 378 NNTCVPTSECFRCEVNGVTWQNGQ 449
+ CVP +C C+ +G + G+
Sbjct: 641 TSQCVPLHKC-GCDFDGHYYTMGE 663
Score = 39.3 bits (90), Expect = 0.016
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 243 CENNVAFSLKNSFCEQTCDDVINKQHPTHICDEGCKCQSGYVRNSNNTCVP 395
C N + S C+ C + K H C EGC+C +GYV N + +P
Sbjct: 1372 CPPNSHYESCVSVCQPRCAAIRLKSDCNHYCVEGCQCDAGYVLNGKSCILP 1422
Score = 38.1 bits (87), Expect = 0.035
Identities = 29/100 (29%), Positives = 40/100 (40%)
Frame = +3
Query: 198 GSNRTEEMCYAATKCCENNVAFSLKNSFCEQTCDDVINKQHPTHICDEGCKCQSGYVRNS 377
G RT + C +C EN+ C +TC+ + C EGC+C GY R
Sbjct: 972 GPWRTYDFC--PLECPENSHFEECMT--CTETCETLALGPICVDSCSEGCQCDEGY-RLQ 1026
Query: 378 NNTCVPTSECFRCEVNGVTWQNGQTKKDVYACRLFICVRG 497
+ CV SEC C G +T C++F G
Sbjct: 1027 GSQCVTRSEC-GCNFEGHQLATNETFWVDQDCQIFCYCNG 1065
>sp|Q69Z28|ATS16_MOUSE ADAMTS-16 precursor (A disintegrin and metalloproteinase with
thrombospondin motifs 16) (ADAM-TS 16) (ADAM-TS16)
Length = 1222
Score = 47.0 bits (110), Expect = 8e-05
Identities = 31/95 (32%), Positives = 39/95 (41%), Gaps = 21/95 (22%)
Frame = +3
Query: 33 CRQGKWICTKNICTK---------DCQWSDWKISTPCNVTCGQGIQILERTVARV-AQYE 182
C Q W C C K WSDW +PC+ TCG GI +R +
Sbjct: 561 CGQDMW-CRGGQCVKYGDEGPKPTHGHWSDWSPWSPCSRTCGGGISHRDRLCTNPRPSHG 619
Query: 183 GKDCQGSNRTEEMC-----------YAATKCCENN 254
GK CQGS RT ++C + A +C E N
Sbjct: 620 GKFCQGSTRTLKLCNSQRCPLDSVDFRAAQCAEYN 654
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,244,965
Number of Sequences: 369166
Number of extensions: 2225095
Number of successful extensions: 7080
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6987
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9462723610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)