Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_003_I19
(467 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2) 219 2e-57
sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2) 219 2e-57
sp|P05086|EF2_MESAU Elongation factor 2 (EF-2) 219 2e-57
sp|P05197|EF2_RAT Elongation factor 2 (EF-2) 219 2e-57
sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2) 219 2e-57
sp|P13060|EF2_DROME Elongation factor 2 (EF-2) 218 4e-57
sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2) 218 4e-57
sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2) 213 2e-55
sp|O23755|EF2_BETVU Elongation factor 2 (EF-2) 192 4e-49
sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2) 191 9e-49
>sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2)
Length = 858
Score = 219 bits (559), Expect = 2e-57
Identities = 102/145 (70%), Positives = 117/145 (80%)
Frame = +3
Query: 3 IHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSE 182
IHRGGGQIIPTARRC YASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E
Sbjct: 714 IHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEE 773
Query: 183 MQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGI 362
QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P
Sbjct: 774 SQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQ 833
Query: 363 TVKDTRKRKGLSEDVPLLDKFLDKL 437
V +TRKRKGL E +P LD FLDKL
Sbjct: 834 VVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2)
Length = 858
Score = 219 bits (559), Expect = 2e-57
Identities = 102/145 (70%), Positives = 117/145 (80%)
Frame = +3
Query: 3 IHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSE 182
IHRGGGQIIPTARRC YASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E
Sbjct: 714 IHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEE 773
Query: 183 MQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGI 362
QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P
Sbjct: 774 SQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQ 833
Query: 363 TVKDTRKRKGLSEDVPLLDKFLDKL 437
V +TRKRKGL E +P LD FLDKL
Sbjct: 834 VVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P05086|EF2_MESAU Elongation factor 2 (EF-2)
Length = 858
Score = 219 bits (559), Expect = 2e-57
Identities = 102/145 (70%), Positives = 117/145 (80%)
Frame = +3
Query: 3 IHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSE 182
IHRGGGQIIPTARRC YASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E
Sbjct: 714 IHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEE 773
Query: 183 MQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGI 362
QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P
Sbjct: 774 SQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQ 833
Query: 363 TVKDTRKRKGLSEDVPLLDKFLDKL 437
V +TRKRKGL E +P LD FLDKL
Sbjct: 834 VVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P05197|EF2_RAT Elongation factor 2 (EF-2)
Length = 858
Score = 219 bits (559), Expect = 2e-57
Identities = 102/145 (70%), Positives = 117/145 (80%)
Frame = +3
Query: 3 IHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSE 182
IHRGGGQIIPTARRC YASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E
Sbjct: 714 IHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEE 773
Query: 183 MQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGI 362
QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P
Sbjct: 774 SQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQ 833
Query: 363 TVKDTRKRKGLSEDVPLLDKFLDKL 437
V +TRKRKGL E +P LD FLDKL
Sbjct: 834 VVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2)
Length = 852
Score = 219 bits (558), Expect = 2e-57
Identities = 105/145 (72%), Positives = 118/145 (81%)
Frame = +3
Query: 3 IHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSE 182
IHRGGGQIIPTARR FYASVLTA P LLEPVY EIQ PE A+GGIY LN+RRG +F E
Sbjct: 708 IHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEE 767
Query: 183 MQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGI 362
QV GTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+PL+ +KP
Sbjct: 768 SQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQ 827
Query: 363 TVKDTRKRKGLSEDVPLLDKFLDKL 437
V DTRKRKGL E VP LD +LDK+
Sbjct: 828 IVLDTRKRKGLKEGVPALDNYLDKM 852
>sp|P13060|EF2_DROME Elongation factor 2 (EF-2)
Length = 844
Score = 218 bits (556), Expect = 4e-57
Identities = 101/145 (69%), Positives = 118/145 (81%)
Frame = +3
Query: 3 IHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSE 182
IHRGGGQIIPT RRC YA+ +TA P L+EPVY CEIQ PE A+GGIY LN+RRG +F E
Sbjct: 700 IHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE 759
Query: 183 MQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGI 362
QV GTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P +P SKP
Sbjct: 760 NQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYA 819
Query: 363 TVKDTRKRKGLSEDVPLLDKFLDKL 437
V+DTRKRKGL E +P L ++LDKL
Sbjct: 820 IVQDTRKRKGLKEGLPDLSQYLDKL 844
>sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2)
Length = 858
Score = 218 bits (556), Expect = 4e-57
Identities = 101/145 (69%), Positives = 116/145 (80%)
Frame = +3
Query: 3 IHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSE 182
IHRGGGQIIPTARRC YA VLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E
Sbjct: 714 IHRGGGQIIPTARRCLYACVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEE 773
Query: 183 MQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGI 362
QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P
Sbjct: 774 SQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDSASRPSQ 833
Query: 363 TVKDTRKRKGLSEDVPLLDKFLDKL 437
V +TRKRKGL E +P LD FLDKL
Sbjct: 834 VVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2)
Length = 858
Score = 213 bits (542), Expect = 2e-55
Identities = 100/145 (68%), Positives = 115/145 (79%)
Frame = +3
Query: 3 IHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSE 182
IHR GGQIIPTARRC YASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E
Sbjct: 714 IHRRGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEE 773
Query: 183 MQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGI 362
QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+
Sbjct: 774 SQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRGSQ 833
Query: 363 TVKDTRKRKGLSEDVPLLDKFLDKL 437
V +TRKRKGL E +P LD FLDKL
Sbjct: 834 VVAETRKRKGLKEGIPALDNFLDKL 858
>sp|O23755|EF2_BETVU Elongation factor 2 (EF-2)
Length = 843
Score = 192 bits (487), Expect = 4e-49
Identities = 96/145 (66%), Positives = 108/145 (74%)
Frame = +3
Query: 3 IHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSE 182
IHRGGGQIIPTARR FYAS LTA P LLEPVY EIQ PE ALGGIYS LN++RG +F E
Sbjct: 699 IHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEE 758
Query: 183 MQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGI 362
MQ GTP Y +KAYLPV ESF F+S LRA T GQAFPQCVFDHW++ P +PL+ S+
Sbjct: 759 MQRPGTPLYNIKAYLPVVESFGFSSTLRASTSGQAFPQCVFDHWEMMPSDPLEAGSQAST 818
Query: 363 TVKDTRKRKGLSEDVPLLDKFLDKL 437
V RKRKGL E + L +F DKL
Sbjct: 819 LVSVIRKRKGLKEQMTPLSEFEDKL 843
>sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2)
Length = 842
Score = 191 bits (484), Expect = 9e-49
Identities = 95/145 (65%), Positives = 107/145 (73%)
Frame = +3
Query: 3 IHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSE 182
IHRGGGQIIPTARR YAS L ASP + EPV+ EIQ E A+GGIYS LNK+RG +FSE
Sbjct: 698 IHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSE 757
Query: 183 MQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGI 362
Q GTP Y +KAYLPVNESF FT ELR T GQAFPQ VFDHW G+PLDP SKPG
Sbjct: 758 EQRVGTPLYNIKAYLPVNESFGFTGELRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQ 817
Query: 363 TVKDTRKRKGLSEDVPLLDKFLDKL 437
V + RKRKGL E+VP ++ D+L
Sbjct: 818 IVCEARKRKGLKENVPDYTEYYDRL 842
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,256,464
Number of Sequences: 369166
Number of extensions: 1200778
Number of successful extensions: 2663
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2552
length of database: 68,354,980
effective HSP length: 101
effective length of database: 49,696,745
effective search space used: 2683624230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)