Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_003_H22
(460 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P50502|F10A1_HUMAN Hsc70-interacting protein (Hip) (Puta... 63 4e-10
sp|Q5RF31|F10A1_PONPY Hsc70-interacting protein (Hip) (Prot... 63 4e-10
sp|P50503|F10A1_RAT Hsc70-interacting protein (Hip) (Protei... 62 5e-10
sp|Q8NFI4|F10A5_HUMAN Protein FAM10A5 62 6e-10
sp|Q5ZLF0|F10A1_CHICK Hsc70-interacting protein (Hip) (Prot... 61 1e-09
sp|Q99L47|F10A1_MOUSE Hsc70-interacting protein (Hip) (Prot... 60 2e-09
sp|Q9USI5|STI1_SCHPO Heat shock protein sti1 homolog 37 0.016
sp|P15705|STI1_YEAST Heat shock protein STI1 35 0.061
sp|Q08168|HRP_PLABE 58 kDa phosphoprotein (Heat shock-relat... 35 0.080
sp|Q60864|STIP1_MOUSE Stress-induced-phosphoprotein 1 (STI1... 32 0.68
>sp|P50502|F10A1_HUMAN Hsc70-interacting protein (Hip) (Putative tumor suppressor ST13)
(Protein FAM10A1) (Progesterone receptor-associated p48
protein)
Length = 369
Score = 62.8 bits (151), Expect = 4e-10
Identities = 27/55 (49%), Positives = 40/55 (72%)
Frame = +2
Query: 158 DLFNDPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKMQSKFGGAA 322
++ +DPE++ ++DPEVM A +V NPA + KYQ+NPKV +I K+ +KFGG A
Sbjct: 315 EILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGGQA 369
>sp|Q5RF31|F10A1_PONPY Hsc70-interacting protein (Hip) (Protein ST13 homolog) (Protein
FAM10A1)
Length = 369
Score = 62.8 bits (151), Expect = 4e-10
Identities = 27/55 (49%), Positives = 40/55 (72%)
Frame = +2
Query: 158 DLFNDPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKMQSKFGGAA 322
++ +DPE++ ++DPEVM A +V NPA + KYQ+NPKV +I K+ +KFGG A
Sbjct: 315 EILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGGQA 369
>sp|P50503|F10A1_RAT Hsc70-interacting protein (Hip) (Protein ST13 homolog) (Protein
FAM10A1)
Length = 368
Score = 62.4 bits (150), Expect = 5e-10
Identities = 26/53 (49%), Positives = 39/53 (73%)
Frame = +2
Query: 158 DLFNDPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKMQSKFGG 316
++ +DPE++ ++DPEVM A +V NP+ + KYQNNPKV +I K+ +KFGG
Sbjct: 314 EILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQNNPKVMNLISKLSAKFGG 366
>sp|Q8NFI4|F10A5_HUMAN Protein FAM10A5
Length = 369
Score = 62.0 bits (149), Expect = 6e-10
Identities = 27/55 (49%), Positives = 39/55 (70%)
Frame = +2
Query: 158 DLFNDPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKMQSKFGGAA 322
++ +DPE + ++DPEVM A +V NPA + KYQ+NPKV +I K+ +KFGG A
Sbjct: 315 EILSDPEALAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGGQA 369
>sp|Q5ZLF0|F10A1_CHICK Hsc70-interacting protein (Hip) (Protein ST13 homolog) (Protein
FAM10A1)
Length = 361
Score = 61.2 bits (147), Expect = 1e-09
Identities = 26/52 (50%), Positives = 38/52 (73%)
Frame = +2
Query: 158 DLFNDPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKMQSKFG 313
++ +DPE++ ++DPEVM A +V NPA + KYQNNPKV +I K+ +KFG
Sbjct: 307 EILSDPEVLAAMQDPEVMAAFQDVAQNPANMSKYQNNPKVMSLITKLSAKFG 358
>sp|Q99L47|F10A1_MOUSE Hsc70-interacting protein (Hip) (Protein ST13 homolog) (Protein
FAM10A1)
Length = 371
Score = 60.5 bits (145), Expect = 2e-09
Identities = 25/53 (47%), Positives = 39/53 (73%)
Frame = +2
Query: 158 DLFNDPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKMQSKFGG 316
++ +DPE++ ++DPEVM A +V NP+ + KYQ+NPKV +I K+ +KFGG
Sbjct: 317 EILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQSNPKVMNLISKLSAKFGG 369
>sp|Q9USI5|STI1_SCHPO Heat shock protein sti1 homolog
Length = 591
Score = 37.4 bits (85), Expect = 0.016
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +2
Query: 170 DPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKM 298
DPE++ L+DP + L + NPAAL+++ NP V I+K+
Sbjct: 540 DPEVLGILQDPAMQAILGQARENPAALMEHMKNPTVKSKIEKL 582
Score = 29.3 bits (64), Expect = 4.4
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 161 LFNDPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKII 289
L ++PE L D M L ++ NP +++ N+P++ K+I
Sbjct: 146 LASNPETASLLADSAFMAKLQKIQQNPGSIMAELNDPRMMKVI 188
>sp|P15705|STI1_YEAST Heat shock protein STI1
Length = 589
Score = 35.4 bits (80), Expect = 0.061
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +2
Query: 170 DPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKM 298
DPE+ ++DP + L + NPAAL ++ NP+V K I+ +
Sbjct: 537 DPEVAAIMQDPVMQSILQQAQQNPAALQEHMKNPEVFKKIQTL 579
>sp|Q08168|HRP_PLABE 58 kDa phosphoprotein (Heat shock-related protein) (HRP)
Length = 423
Score = 35.0 bits (79), Expect = 0.080
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 167 NDPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKMQ-SKFGGAAG 325
N PE+ E +P+ + + +++NP + KY ++PK I + ++ S GG G
Sbjct: 365 NSPEMKELFNNPQFFQMMQNMMSNPDLINKYASDPKYKNIFENLKNSDLGGMMG 418
>sp|Q60864|STIP1_MOUSE Stress-induced-phosphoprotein 1 (STI1) (Hsc70/Hsp90-organizing
protein) (Hop) (mSTI1)
Length = 543
Score = 32.0 bits (71), Expect = 0.68
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +2
Query: 170 DPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKM 298
DPE+ + + DP + L ++ +P AL ++ NP +A+ I+K+
Sbjct: 492 DPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKL 534
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,663,298
Number of Sequences: 369166
Number of extensions: 743632
Number of successful extensions: 2425
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2424
length of database: 68,354,980
effective HSP length: 101
effective length of database: 49,696,745
effective search space used: 2534533995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)