Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_003_H01
(898 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 476 e-134
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 476 e-134
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 476 e-134
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 475 e-134
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 471 e-132
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 470 e-132
sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (... 463 e-130
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 463 e-130
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 462 e-130
sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A 461 e-129
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 476 bits (1225), Expect = e-134
Identities = 248/299 (82%), Positives = 253/299 (84%)
Frame = +2
Query: 2 THLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEID 181
THLGGEDFDNRMVNHFI EFKRKHKKDIS+NKRAVRRLRTACERAKRTLSSS QA+IEID
Sbjct: 226 THLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEID 285
Query: 182 SLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPK 361
SLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IHDIVLVGGSTRIPK
Sbjct: 286 SLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPK 345
Query: 362 IQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIET 541
IQKLLQD FNGKELNKSINPDE ILSGDKSE VQD GIET
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIET 405
Query: 542 AGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIP 721
AGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIP
Sbjct: 406 AGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIP 465
Query: 722 PAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAEAEK 898
PAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV EAEK
Sbjct: 466 PAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEK 524
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 476 bits (1225), Expect = e-134
Identities = 248/299 (82%), Positives = 253/299 (84%)
Frame = +2
Query: 2 THLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEID 181
THLGGEDFDNRMVNHFI EFKRKHKKDIS+NKRAVRRLRTACERAKRTLSSS QA+IEID
Sbjct: 226 THLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEID 285
Query: 182 SLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPK 361
SLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IHDIVLVGGSTRIPK
Sbjct: 286 SLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPK 345
Query: 362 IQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIET 541
IQKLLQD FNGKELNKSINPDE ILSGDKSE VQD GIET
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIET 405
Query: 542 AGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIP 721
AGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIP
Sbjct: 406 AGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIP 465
Query: 722 PAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAEAEK 898
PAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV EAEK
Sbjct: 466 PAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEK 524
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 476 bits (1225), Expect = e-134
Identities = 248/299 (82%), Positives = 253/299 (84%)
Frame = +2
Query: 2 THLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEID 181
THLGGEDFDNRMVNHFI EFKRKHKKDIS+NKRAVRRLRTACERAKRTLSSS QA+IEID
Sbjct: 226 THLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEID 285
Query: 182 SLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPK 361
SLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IHDIVLVGGSTRIPK
Sbjct: 286 SLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPK 345
Query: 362 IQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIET 541
IQKLLQD FNGKELNKSINPDE ILSGDKSE VQD GIET
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIET 405
Query: 542 AGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIP 721
AGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIP
Sbjct: 406 AGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIP 465
Query: 722 PAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAEAEK 898
PAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV EAEK
Sbjct: 466 PAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEK 524
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 475 bits (1223), Expect = e-134
Identities = 247/299 (82%), Positives = 253/299 (84%)
Frame = +2
Query: 2 THLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEID 181
THLGGEDFDNRMVNHFI EFKRKHKKDISDNKRAVRRLRTACERAKRTLSSS QA+IEID
Sbjct: 226 THLGGEDFDNRMVNHFITEFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSTQASIEID 285
Query: 182 SLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPK 361
SLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAK+DK IHDIVLVGGSTRIPK
Sbjct: 286 SLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKMDKAQIHDIVLVGGSTRIPK 345
Query: 362 IQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIET 541
IQKLLQD FNGKELNKSINPDE ILSGDKSE VQD GIET
Sbjct: 346 IQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIET 405
Query: 542 AGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIP 721
AGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIP
Sbjct: 406 AGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIP 465
Query: 722 PAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAEAEK 898
PAPRGVPQIEVTFDIDANGI+NVSAV+K TGKENKITITNDKGRLSK+DIERMV EAEK
Sbjct: 466 PAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEK 524
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 471 bits (1211), Expect = e-132
Identities = 246/299 (82%), Positives = 251/299 (83%)
Frame = +2
Query: 2 THLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEID 181
THLGGEDFDNRMVNHFI EFKR KKDIS+NKRAVRRLRTACERAKRTLSSS QA+IEID
Sbjct: 226 THLGGEDFDNRMVNHFIAEFKRNDKKDISENKRAVRRLRTACERAKRTLSSSTQASIEID 285
Query: 182 SLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPK 361
SLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IHDIVLVGGSTRIPK
Sbjct: 286 SLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPK 345
Query: 362 IQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIET 541
IQKLLQD FNGKELNKSINPDE ILSGDKSE VQD GIET
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIET 405
Query: 542 AGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIP 721
AGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIP
Sbjct: 406 AGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIP 465
Query: 722 PAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAEAEK 898
PAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV EAEK
Sbjct: 466 PAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEK 524
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 470 bits (1210), Expect = e-132
Identities = 243/299 (81%), Positives = 252/299 (84%)
Frame = +2
Query: 2 THLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEID 181
THLGGEDFDNRMVNHFI EFKRK+KKDISDNKRAVRRLRTACERAKRTLSSS QA+IEID
Sbjct: 226 THLGGEDFDNRMVNHFIAEFKRKYKKDISDNKRAVRRLRTACERAKRTLSSSTQASIEID 285
Query: 182 SLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPK 361
SLYEGIDFYTSITRARFEELNADLFR TL+PVEK+LRDAK+DK +HDIVLVGGSTRIPK
Sbjct: 286 SLYEGIDFYTSITRARFEELNADLFRGTLDPVEKSLRDAKMDKAQVHDIVLVGGSTRIPK 345
Query: 362 IQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIET 541
IQKLLQD FNGKELNKSINPDE ILSGDKSE VQD GIET
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIET 405
Query: 542 AGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIP 721
AGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIP
Sbjct: 406 AGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIP 465
Query: 722 PAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAEAEK 898
PAPRGVPQIEVTFDIDANGI+NVSA +K TGKENKITITNDKGRLSK+DIERMV EAEK
Sbjct: 466 PAPRGVPQIEVTFDIDANGIMNVSAADKSTGKENKITITNDKGRLSKEDIERMVQEAEK 524
>sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (Hsc 70-4)
Length = 652
Score = 463 bits (1192), Expect = e-130
Identities = 238/299 (79%), Positives = 252/299 (84%)
Frame = +2
Query: 2 THLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEID 181
THLGGEDFDNRMVNHF+QEFKRK+KKD++ NKRA+RRLRTACERAKRTLSSS QA+IEID
Sbjct: 226 THLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEID 285
Query: 182 SLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPK 361
SL+EGIDFYTSITRARFEELNADLFRST+EPVEK+LRDAK+DK IHDIVLVGGSTRIPK
Sbjct: 286 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKSQIHDIVLVGGSTRIPK 345
Query: 362 IQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIET 541
+QKLLQD FNGKELNKSINPDE IL GDKSE VQD GIET
Sbjct: 346 VQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIET 405
Query: 542 AGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIP 721
AGGVMT LIKRN YSDNQPGVLIQV+EGERAMTKDNNLLGKFEL GIP
Sbjct: 406 AGGVMTTLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIP 465
Query: 722 PAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAEAEK 898
PAPRGVPQIEVTFDIDANGILNVSAVEK T KENKITITNDKGRLSK++IERMV EAEK
Sbjct: 466 PAPRGVPQIEVTFDIDANGILNVSAVEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 524
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 463 bits (1192), Expect = e-130
Identities = 239/299 (79%), Positives = 249/299 (83%)
Frame = +2
Query: 2 THLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEID 181
THLGGEDFDNRMVNHFI EFKRKHKKDISDNKRAVRRL TACERAKRTLSSS QA+IEID
Sbjct: 226 THLGGEDFDNRMVNHFIAEFKRKHKKDISDNKRAVRRLATACERAKRTLSSSTQASIEID 285
Query: 182 SLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPK 361
SLYEG+DFYTSITRARFEELNADLFR TL+PVEKALRDAK+DK +HDIVLVGGSTRIPK
Sbjct: 286 SLYEGVDFYTSITRARFEELNADLFRGTLDPVEKALRDAKMDKAQVHDIVLVGGSTRIPK 345
Query: 362 IQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIET 541
++KLLQD FNGKELNKSINPDE GDKSE VQD GIET
Sbjct: 346 MEKLLQDFFNGKELNKSINPDEAVAYGAAVQAESSLGDKSENVQDLVLLDVTPLSLGIET 405
Query: 542 AGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIP 721
AGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIP
Sbjct: 406 AGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIP 465
Query: 722 PAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAEAEK 898
PAPRGVPQIEVTFDIDANGI+NVSAV+K TGKENKITITNDKGRLSK+DIERMV EAEK
Sbjct: 466 PAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEK 524
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 462 bits (1189), Expect = e-130
Identities = 235/299 (78%), Positives = 255/299 (85%)
Frame = +2
Query: 2 THLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEID 181
THLGGEDFDNR+V+HF++EFKRKHKKDIS NKRA+RRLRTACERAKRTLSSS+QA+IEID
Sbjct: 228 THLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRALRRLRTACERAKRTLSSSSQASIEID 287
Query: 182 SLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPK 361
SL+EGIDFYTSITRARFEE+ +DLFR TLEPVEKALRDAK+DK IHD+VLVGGSTRIPK
Sbjct: 288 SLFEGIDFYTSITRARFEEMCSDLFRGTLEPVEKALRDAKMDKAQIHDVVLVGGSTRIPK 347
Query: 362 IQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIET 541
+QKLLQD FNG+ELNKSINPDE ILSGDKSE VQD GIET
Sbjct: 348 VQKLLQDFFNGRELNKSINPDEAVAYGAAIQAAILSGDKSENVQDLLLLDVAPLSLGIET 407
Query: 542 AGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIP 721
AGGVMTALIKRN YSDNQPGV+IQVYEGERAMTKDNNLLGKFEL+GIP
Sbjct: 408 AGGVMTALIKRNTTIPSKQTQTFTTYSDNQPGVMIQVYEGERAMTKDNNLLGKFELSGIP 467
Query: 722 PAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAEAEK 898
PAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV +A+K
Sbjct: 468 PAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQDADK 526
>sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A
Length = 640
Score = 461 bits (1185), Expect = e-129
Identities = 236/299 (78%), Positives = 253/299 (84%)
Frame = +2
Query: 2 THLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEID 181
THLGGEDFDNRMVNHF EFKRKHKKD++ N RA+RRLRTACERAKRTLSSS+QA+IEID
Sbjct: 227 THLGGEDFDNRMVNHFCAEFKRKHKKDLASNPRALRRLRTACERAKRTLSSSSQASIEID 286
Query: 182 SLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPK 361
SL+EGIDFYT+ITRARFEEL ADLFRST++PVEK+LRDAK+DK +HDIVLVGGSTRIPK
Sbjct: 287 SLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKSQVHDIVLVGGSTRIPK 346
Query: 362 IQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIET 541
+QKLL DLF+GKELNKSINPDE ILSGDKSEAVQD GIET
Sbjct: 347 VQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIET 406
Query: 542 AGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIP 721
AGGVMTALIKRN YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL+GIP
Sbjct: 407 AGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIP 466
Query: 722 PAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAEAEK 898
PAPRGVPQIEVTFDIDANGILNVSA +K TGK+NKITITNDKGRLSKDDIERMV EAEK
Sbjct: 467 PAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITITNDKGRLSKDDIERMVNEAEK 525
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,679,943
Number of Sequences: 369166
Number of extensions: 1481769
Number of successful extensions: 5449
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4569
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9030416440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)