Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_003_F18
(844 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O15503|INSI1_HUMAN Insulin-induced gene 1 protein (INSIG-1) 163 6e-40
sp|Q08755|INSI1_RAT Insulin-induced gene 1 protein (INSIG-1... 161 2e-39
sp|Q8BGI3|INSI1_MOUSE Insulin-induced gene 1 protein (INSIG-1) 161 2e-39
sp|Q8CFA6|INSI1_CRIGR Insulin-induced gene 1 protein (INSIG-1) 161 2e-39
sp|P27904|VENV_BEV Envelope protein 32 1.7
sp|Q9SYX7|A22B_ARATH HVA22-like protein b (AtHVA22b) 32 1.7
sp|P10090|WHITE_DROME White protein 32 2.2
sp|P38837|YHT3_YEAST Hypothetical 32.2 kDa protein in ACT5-... 32 2.2
sp|Q8LKW0|TERT_ORYSA Telomerase reverse transcriptase (OsTERT) 30 8.3
>sp|O15503|INSI1_HUMAN Insulin-induced gene 1 protein (INSIG-1)
Length = 277
Score = 163 bits (412), Expect = 6e-40
Identities = 84/181 (46%), Positives = 111/181 (61%), Gaps = 3/181 (1%)
Frame = +3
Query: 36 RILLLFIVGVSFAYVTHXXXXXXXXXXXXXXXXXXXXXPSVWIPLFCGITAVFIGCLYPC 215
R L+LF VGV A V + + W+P CG A +G LYPC
Sbjct: 87 RSLVLFSVGVVLALVLNLLQIQRNVTLFPEEVIATIFSSAWWVPPCCGTAAAVVGLLYPC 146
Query: 216 IDIKLGQIKFYNQEWASVLRCIALFLGINHAPDKLDFTSDSQLQLSLFAMCIGLWWLFDQ 395
ID LG+ + +EWASV+RCIA+F+GINHA KLDF ++ QL L+L A+ +GLWW FD+
Sbjct: 147 IDSHLGEPHKFKREWASVMRCIAVFVGINHASAKLDFANNVQLSLTLAALSLGLWWTFDR 206
Query: 396 SFTGLGLTSITTFLATMFYRLLEYIGLYRFSHP---AMHSWLPFVFFSGAVTVGIVGRQL 566
S +GLGL FLAT+ + L Y G+Y+++ P + SWLP +FFSG VTVG +GRQL
Sbjct: 207 SRSGLGLGITIAFLATLITQFLVYNGVYQYTSPDFLYIRSWLPCIFFSGGVTVGNIGRQL 266
Query: 567 A 569
A
Sbjct: 267 A 267
>sp|Q08755|INSI1_RAT Insulin-induced gene 1 protein (INSIG-1) (Insulin-induced growth
response protein CL-6) (Immediate-early protein CL-6)
Length = 259
Score = 161 bits (407), Expect = 2e-39
Identities = 83/181 (45%), Positives = 110/181 (60%), Gaps = 3/181 (1%)
Frame = +3
Query: 36 RILLLFIVGVSFAYVTHXXXXXXXXXXXXXXXXXXXXXPSVWIPLFCGITAVFIGCLYPC 215
R L+LF GV A V + + W+P CG A +G LYPC
Sbjct: 69 RSLVLFSFGVVLALVLNLLQIQRNVTLFPDEVIATIFSSAWWVPPCCGTAAAVVGLLYPC 128
Query: 216 IDIKLGQIKFYNQEWASVLRCIALFLGINHAPDKLDFTSDSQLQLSLFAMCIGLWWLFDQ 395
ID LG+ + +EWASV+RCIA+F+GINHA KLDF ++ QL L+L A+ +GLWW FD+
Sbjct: 129 IDSHLGEPHKFKREWASVMRCIAVFVGINHASAKLDFANNVQLSLTLAALSLGLWWTFDR 188
Query: 396 SFTGLGLTSITTFLATMFYRLLEYIGLYRFSHP---AMHSWLPFVFFSGAVTVGIVGRQL 566
S +GLGL FLAT+ + L Y G+Y+++ P + SWLP +FFSG VTVG +GRQL
Sbjct: 189 SRSGLGLGITIAFLATLITQFLVYNGVYQYTSPDFLYIRSWLPCIFFSGGVTVGNIGRQL 248
Query: 567 A 569
A
Sbjct: 249 A 249
>sp|Q8BGI3|INSI1_MOUSE Insulin-induced gene 1 protein (INSIG-1)
Length = 259
Score = 161 bits (407), Expect = 2e-39
Identities = 83/181 (45%), Positives = 110/181 (60%), Gaps = 3/181 (1%)
Frame = +3
Query: 36 RILLLFIVGVSFAYVTHXXXXXXXXXXXXXXXXXXXXXPSVWIPLFCGITAVFIGCLYPC 215
R L+LF GV A V + + W+P CG A +G LYPC
Sbjct: 69 RSLVLFSFGVVLALVLNLLQIQRNVTLFPDEVIATIFSSAWWVPPCCGTAAAVVGLLYPC 128
Query: 216 IDIKLGQIKFYNQEWASVLRCIALFLGINHAPDKLDFTSDSQLQLSLFAMCIGLWWLFDQ 395
ID LG+ + +EWASV+RCIA+F+GINHA KLDF ++ QL L+L A+ +GLWW FD+
Sbjct: 129 IDSHLGEPHKFKREWASVMRCIAVFVGINHASAKLDFANNVQLSLTLAALSLGLWWTFDR 188
Query: 396 SFTGLGLTSITTFLATMFYRLLEYIGLYRFSHP---AMHSWLPFVFFSGAVTVGIVGRQL 566
S +GLGL FLAT+ + L Y G+Y+++ P + SWLP +FFSG VTVG +GRQL
Sbjct: 189 SRSGLGLGITIAFLATLITQFLVYNGVYQYTSPDFLYIRSWLPCIFFSGGVTVGNIGRQL 248
Query: 567 A 569
A
Sbjct: 249 A 249
>sp|Q8CFA6|INSI1_CRIGR Insulin-induced gene 1 protein (INSIG-1)
Length = 257
Score = 161 bits (407), Expect = 2e-39
Identities = 83/181 (45%), Positives = 110/181 (60%), Gaps = 3/181 (1%)
Frame = +3
Query: 36 RILLLFIVGVSFAYVTHXXXXXXXXXXXXXXXXXXXXXPSVWIPLFCGITAVFIGCLYPC 215
R L+LF GV A V + + W+P CG A +G LYPC
Sbjct: 67 RSLVLFSFGVVLALVLNLLQIQRNVTLFPDEVIATIFSSAWWVPPCCGTAAAVVGLLYPC 126
Query: 216 IDIKLGQIKFYNQEWASVLRCIALFLGINHAPDKLDFTSDSQLQLSLFAMCIGLWWLFDQ 395
ID LG+ + +EWASV+RCIA+F+GINHA KLDF ++ QL L+L A+ +GLWW FD+
Sbjct: 127 IDSHLGEPHKFKREWASVMRCIAVFVGINHASAKLDFANNVQLSLTLAALSLGLWWTFDR 186
Query: 396 SFTGLGLTSITTFLATMFYRLLEYIGLYRFSHP---AMHSWLPFVFFSGAVTVGIVGRQL 566
S +GLGL FLAT+ + L Y G+Y+++ P + SWLP +FFSG VTVG +GRQL
Sbjct: 187 SRSGLGLGITIAFLATLITQFLVYNGVYQYTSPDFLYIRSWLPCIFFSGGVTVGNIGRQL 246
Query: 567 A 569
A
Sbjct: 247 A 247
>sp|P27904|VENV_BEV Envelope protein
Length = 233
Score = 32.3 bits (72), Expect = 1.7
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Frame = +3
Query: 342 LQLSLFAMCIGLWWLFDQSFTGL-GLTSITTFLA-----TMFYRLLEYIGL-YRFSHPAM 500
L LSL ++ I WWL +FTG LT I T L MF + + ++ L YR A+
Sbjct: 72 LFLSLASLAIAYWWLPSMTFTGYWALTIIATILVFILLIMMFVKFVNFVKLFYRTGSFAI 131
Query: 501 HSWLPFVFFSGAVTV 545
P V + VT+
Sbjct: 132 AIRGPIVLVALDVTI 146
>sp|Q9SYX7|A22B_ARATH HVA22-like protein b (AtHVA22b)
Length = 167
Score = 32.3 bits (72), Expect = 1.7
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +3
Query: 393 QSFTGLGLTSITTFLATMFYRLLEYIGLYRFSHPAMHSWLPFVFFSGA 536
Q T L S+ F+RLLE+I LY ++ A+ SWL +GA
Sbjct: 47 QWLTYWALYSLIKLFELTFFRLLEWIPLYPYAKLALTSWLVLPGMNGA 94
>sp|P10090|WHITE_DROME White protein
Length = 687
Score = 32.0 bits (71), Expect = 2.2
Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +3
Query: 162 IPLFCGITAVFIGCLYPCIDIKLGQIKFYNQEWASVLRCIALFLGINHAPDKLDF----- 326
+PLF + VF YP I ++ G + F+N C+AL + + +
Sbjct: 515 LPLFLTVPLVFTAIAYPMIGLRAGVLHFFN--------CLALVTLVANVSTSFGYLISCA 566
Query: 327 TSDSQLQLSLFAMCIGLWWLFDQSFTGLGLTSITTFLATMFYRLLEYIGLYRFSHPAM 500
+S + + LS+ I + LF F G + + + L Y+ +R+++ +
Sbjct: 567 SSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPV-------YLKWLSYLSWFRYANEGL 617
>sp|P38837|YHT3_YEAST Hypothetical 32.2 kDa protein in ACT5-YCK1 intergenic region
Length = 291
Score = 32.0 bits (71), Expect = 2.2
Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 11/141 (7%)
Frame = +3
Query: 177 GITAVFIGCLYPCIDIKLG-------QIKFYNQEWASVLRCIALFLGINHAPDKLDFTSD 335
G V G + P ID + + Y S +RC LG+ KL+++S
Sbjct: 160 GTEGVIFGSIVPFIDSFVRYQHQPKTRSSVYKNTLGSFIRCANTLLGLIFGIRKLEWSSS 219
Query: 336 SQLQLSLFAMCIGLWWLFDQS----FTGLGLTSITTFLATMFYRLLEYIGLYRFSHPAMH 503
Q + + I LW FD + F GL + +++ F + + L + LY
Sbjct: 220 LQAAGAWSLLNIVLWLFFDGTLTVFFPGLVIGALSAFTCSQCFSQLS-LALY-------- 270
Query: 504 SWLPFVFFSGAVTVGIVGRQL 566
++ F FF G + +GR L
Sbjct: 271 -FIDFYFF-GFLMFSKLGRYL 289
>sp|Q8LKW0|TERT_ORYSA Telomerase reverse transcriptase (OsTERT)
Length = 1261
Score = 30.0 bits (66), Expect = 8.3
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 450 YRLLEYIGLYRFSHPAMHSWLPFVFFSGAVTVGIVGRQLAKSDILEIVKLKN 605
++L + IG + SH +SWL + FS I+G+Q S E K KN
Sbjct: 632 FQLSDCIGDLKVSH---YSWLSNIEFSNCFCSAIIGKQTGSSTSAEEQKQKN 680
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,883,767
Number of Sequences: 369166
Number of extensions: 1917919
Number of successful extensions: 3980
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3974
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8245425915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)