Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_003_B06
(919 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P31153|METK_HUMAN S-adenosylmethionine synthetase gamma ... 449 e-126
sp|P18298|METK_RAT S-adenosylmethionine synthetase gamma fo... 448 e-125
sp|P13444|METL_RAT S-adenosylmethionine synthetase alpha an... 435 e-122
sp|Q00266|METL_HUMAN S-adenosylmethionine synthetase alpha ... 434 e-121
sp|P40320|METK_DROME S-adenosylmethionine synthetase (Methi... 421 e-117
sp|P50306|METL_CAEEL Probable S-adenosylmethionine syntheta... 421 e-117
sp|P50305|METK_CAEEL Probable S-adenosylmethionine syntheta... 419 e-117
sp|Q27522|METN_CAEEL Probable S-adenosylmethionine syntheta... 414 e-115
sp|O17680|METM_CAEEL Probable S-adenosylmethionine syntheta... 404 e-112
sp|O60198|METK_SCHPO S-adenosylmethionine synthetase (Methi... 400 e-111
>sp|P31153|METK_HUMAN S-adenosylmethionine synthetase gamma form (Methionine
adenosyltransferase) (AdoMet synthetase) (MAT-II)
Length = 395
Score = 449 bits (1156), Expect = e-126
Identities = 218/299 (72%), Positives = 249/299 (83%)
Frame = +1
Query: 22 EETFLFTSESVGEGHPDKICDQVSDAVLDAHLKQDPRAKVACETFSKTGMILIGGEITSN 201
E TFLFTSESVGEGHPDKICDQ+SDAVLDAHL+QDP AKVACET +KTGMIL+ GEITS
Sbjct: 15 EGTFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSR 74
Query: 202 AVVDYQSVIRQTIKEIGFDSCEKGFDYKTCNLLIAIEQQNPEIAKSVHEERSDEDIGAGD 381
A VDYQ V+R+ +K IG+D KGFDYKTCN+L+A+EQQ+P+IA+ VH +R++EDIGAGD
Sbjct: 75 AAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLDRNEEDIGAGD 134
Query: 382 QGLMFGYATDETEELMPLTVVLAHGLNRKLAECRRNGTLPYLRPDTKTQVTVLYKSVQGA 561
QGLMFGYATDETEE MPLT+VLAH LN KLAE RRNGTLP+LRPD+KTQVTV Y +GA
Sbjct: 135 QGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGA 194
Query: 562 CVPIRVHTVVISTQHDENVSIDQLREDLMCHVVKTVIPEIYLDANTIYHLNPSGRFVIGG 741
+PIRVHT+VIS QHDE V +D++R+ L V+K V+P YLD +TIYHL PSGRFVIGG
Sbjct: 195 VLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGG 254
Query: 742 PQGDAGLTGRKIIVDTYXXXXXXXXXXXXXKDYTKVDRSGAYAARWVAKSLVKAGLCKR 918
PQGDAGLTGRKIIVDTY KDYTKVDRS AYAARWVAKSLVK GLC+R
Sbjct: 255 PQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRR 313
>sp|P18298|METK_RAT S-adenosylmethionine synthetase gamma form (Methionine
adenosyltransferase) (AdoMet synthetase) (MAT-II)
Length = 395
Score = 448 bits (1152), Expect = e-125
Identities = 216/299 (72%), Positives = 249/299 (83%)
Frame = +1
Query: 22 EETFLFTSESVGEGHPDKICDQVSDAVLDAHLKQDPRAKVACETFSKTGMILIGGEITSN 201
E TFLFTSESVGEGHPDKICDQ++DAVLDAHL+QDP AKVACET +KTGMIL+ GEITS
Sbjct: 15 EGTFLFTSESVGEGHPDKICDQINDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSR 74
Query: 202 AVVDYQSVIRQTIKEIGFDSCEKGFDYKTCNLLIAIEQQNPEIAKSVHEERSDEDIGAGD 381
A +DYQ V+R+ IK IG+D KGFDYKTCN+L+A+EQQ+P+IA+ VH +R++EDIGAGD
Sbjct: 75 AAIDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLDRNEEDIGAGD 134
Query: 382 QGLMFGYATDETEELMPLTVVLAHGLNRKLAECRRNGTLPYLRPDTKTQVTVLYKSVQGA 561
QGLMFGYATDETEE MPLT+VLAH LN KLAE RRNGTLP+LRPD+KTQVTV Y +GA
Sbjct: 135 QGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGA 194
Query: 562 CVPIRVHTVVISTQHDENVSIDQLREDLMCHVVKTVIPEIYLDANTIYHLNPSGRFVIGG 741
+PIRVHT+VIS QHDE V +D++R+ L ++K V+P YLD +TIYHL PSGRFVIGG
Sbjct: 195 VIPIRVHTIVISVQHDEEVCLDEMRDALKEKLIKAVVPAKYLDEDTIYHLQPSGRFVIGG 254
Query: 742 PQGDAGLTGRKIIVDTYXXXXXXXXXXXXXKDYTKVDRSGAYAARWVAKSLVKAGLCKR 918
PQGDAGLTGRKIIVDTY KDYTKVDRS AYAARWVAKSLVK GLC+R
Sbjct: 255 PQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRR 313
>sp|P13444|METL_RAT S-adenosylmethionine synthetase alpha and beta forms (Methionine
adenosyltransferase) (AdoMet synthetase) (MAT-I/III)
Length = 397
Score = 435 bits (1119), Expect = e-122
Identities = 207/299 (69%), Positives = 248/299 (82%)
Frame = +1
Query: 22 EETFLFTSESVGEGHPDKICDQVSDAVLDAHLKQDPRAKVACETFSKTGMILIGGEITSN 201
E F+FTSESVGEGHPDKICDQ+SDAVLDAHLKQDP AKVACET KTGM+L+ GEITS
Sbjct: 16 EGAFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSM 75
Query: 202 AVVDYQSVIRQTIKEIGFDSCEKGFDYKTCNLLIAIEQQNPEIAKSVHEERSDEDIGAGD 381
A++DYQ V+R TIK IG+D KGFD+KTCN+L+A+EQQ+P+IA+ VH +R++ED+GAGD
Sbjct: 76 AMIDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGD 135
Query: 382 QGLMFGYATDETEELMPLTVVLAHGLNRKLAECRRNGTLPYLRPDTKTQVTVLYKSVQGA 561
QGLMFGYATDETEE MPLT+VLAH LN ++A+ RR+G LP+LRPD+KTQVTV Y GA
Sbjct: 136 QGLMFGYATDETEECMPLTIVLAHKLNTRMADLRRSGVLPWLRPDSKTQVTVQYVQDNGA 195
Query: 562 CVPIRVHTVVISTQHDENVSIDQLREDLMCHVVKTVIPEIYLDANTIYHLNPSGRFVIGG 741
+P+RVHT+VIS QH+E+++++ +RE L V+K V+P YLD +TIYHL PSGRFVIGG
Sbjct: 196 VIPVRVHTIVISVQHNEDITLEAMREALKEQVIKAVVPAKYLDEDTIYHLQPSGRFVIGG 255
Query: 742 PQGDAGLTGRKIIVDTYXXXXXXXXXXXXXKDYTKVDRSGAYAARWVAKSLVKAGLCKR 918
PQGDAG+TGRKIIVDTY KDYTKVDRS AYAARWVAKSLVKAGLC+R
Sbjct: 256 PQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRR 314
>sp|Q00266|METL_HUMAN S-adenosylmethionine synthetase alpha and beta forms (Methionine
adenosyltransferase) (AdoMet synthetase) (MAT-I/III)
Length = 395
Score = 434 bits (1115), Expect = e-121
Identities = 203/303 (66%), Positives = 250/303 (82%)
Frame = +1
Query: 10 YNFGEETFLFTSESVGEGHPDKICDQVSDAVLDAHLKQDPRAKVACETFSKTGMILIGGE 189
++ E F+FTSESVGEGHPDKICDQ+SDAVLDAHLKQDP AKVACET KTGM+L+ GE
Sbjct: 11 HSLSEGVFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGE 70
Query: 190 ITSNAVVDYQSVIRQTIKEIGFDSCEKGFDYKTCNLLIAIEQQNPEIAKSVHEERSDEDI 369
ITS A+VDYQ V+R TIK IG+D KGFD+KTCN+L+A+EQQ+P+IA+ VH +R++ED+
Sbjct: 71 ITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDV 130
Query: 370 GAGDQGLMFGYATDETEELMPLTVVLAHGLNRKLAECRRNGTLPYLRPDTKTQVTVLYKS 549
GAGDQGLMFGYATDETEE MPLT++LAH LN ++A+ RR+G LP+LRPD+KTQVTV Y
Sbjct: 131 GAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYMQ 190
Query: 550 VQGACVPIRVHTVVISTQHDENVSIDQLREDLMCHVVKTVIPEIYLDANTIYHLNPSGRF 729
GA +P+R+HT+VIS QH+E+++++++R L V++ V+P YLD +T+YHL PSGRF
Sbjct: 191 DNGAVIPVRIHTIVISVQHNEDITLEEMRRALKEQVIRAVVPAKYLDEDTVYHLQPSGRF 250
Query: 730 VIGGPQGDAGLTGRKIIVDTYXXXXXXXXXXXXXKDYTKVDRSGAYAARWVAKSLVKAGL 909
VIGGPQGDAG+TGRKIIVDTY KDYTKVDRS AYAARWVAKSLVKAGL
Sbjct: 251 VIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGL 310
Query: 910 CKR 918
C+R
Sbjct: 311 CRR 313
>sp|P40320|METK_DROME S-adenosylmethionine synthetase (Methionine adenosyltransferase)
(AdoMet synthetase)
Length = 408
Score = 421 bits (1083), Expect = e-117
Identities = 205/297 (69%), Positives = 240/297 (80%)
Frame = +1
Query: 28 TFLFTSESVGEGHPDKICDQVSDAVLDAHLKQDPRAKVACETFSKTGMILIGGEITSNAV 207
TFLFTSESVGEGHPDK+CDQ+SDA+LDAHLKQDP AKVACET +KTGMIL+ GEITS AV
Sbjct: 28 TFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAKTGMILLCGEITSKAV 87
Query: 208 VDYQSVIRQTIKEIGFDSCEKGFDYKTCNLLIAIEQQNPEIAKSVHEERSDEDIGAGDQG 387
VDYQ V+R+T++ IG+D KGFD+KTCN+L+A++QQ+PEIA VH R++E+IGAGDQG
Sbjct: 88 VDYQKVVRETVQHIGYDDSSKGFDFKTCNVLLALDQQSPEIAAGVHVNRAEEEIGAGDQG 147
Query: 388 LMFGYATDETEELMPLTVVLAHGLNRKLAECRRNGTLPYLRPDTKTQVTVLYKSVQGACV 567
+MFGYATDETEE MPLTVVLAH LN K+AE RR+ + RPD+KTQVT Y QG+ V
Sbjct: 148 IMFGYATDETEECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEYLFNQGSAV 207
Query: 568 PIRVHTVVISTQHDENVSIDQLREDLMCHVVKTVIPEIYLDANTIYHLNPSGRFVIGGPQ 747
P RVHT+V+S QH E +S++ LR ++M VVK VIP Y+DANTI H+NP G FVIGGP
Sbjct: 208 PKRVHTIVVSMQHSEKISLETLRSEVMEKVVKVVIPAKYIDANTIVHINPCGLFVIGGPM 267
Query: 748 GDAGLTGRKIIVDTYXXXXXXXXXXXXXKDYTKVDRSGAYAARWVAKSLVKAGLCKR 918
GDAGLTGRKIIVDTY KD+TKVDRS AYAARWVAKSLVKAGLCKR
Sbjct: 268 GDAGLTGRKIIVDTYGGWGAHGGGAFSGKDFTKVDRSAAYAARWVAKSLVKAGLCKR 324
>sp|P50306|METL_CAEEL Probable S-adenosylmethionine synthetase C06E7.3 (Methionine
adenosyltransferase) (AdoMet synthetase)
Length = 404
Score = 421 bits (1081), Expect = e-117
Identities = 203/299 (67%), Positives = 241/299 (80%)
Frame = +1
Query: 22 EETFLFTSESVGEGHPDKICDQVSDAVLDAHLKQDPRAKVACETFSKTGMILIGGEITSN 201
+ FLFTSESV EGHPDK+CDQ+SDAVLDAHL QDP AKVACET +KTGMI++ GEITS
Sbjct: 3 QHKFLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSK 62
Query: 202 AVVDYQSVIRQTIKEIGFDSCEKGFDYKTCNLLIAIEQQNPEIAKSVHEERSDEDIGAGD 381
AVVDYQ ++R IK+IG+D KGFDYKTCN+L+A+EQQ+PEIA VH ++ +D+GAGD
Sbjct: 63 AVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGD 122
Query: 382 QGLMFGYATDETEELMPLTVVLAHGLNRKLAECRRNGTLPYLRPDTKTQVTVLYKSVQGA 561
QG+MFGYATDETEE MPLT++L+H LNRKL E RR+G L ++RPD+KTQVT+ Y S GA
Sbjct: 123 QGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGA 182
Query: 562 CVPIRVHTVVISTQHDENVSIDQLREDLMCHVVKTVIPEIYLDANTIYHLNPSGRFVIGG 741
CVP+RVHTVVISTQH ++S+D LR++L+ V+K VIP +D TIYHLNP G F+IGG
Sbjct: 183 CVPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYHLNPCGSFIIGG 242
Query: 742 PQGDAGLTGRKIIVDTYXXXXXXXXXXXXXKDYTKVDRSGAYAARWVAKSLVKAGLCKR 918
P GDAGLTGRKIIVDTY KD TKVDRS AYAARWVAKSLVKAGLC+R
Sbjct: 243 PMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKAGLCRR 301
>sp|P50305|METK_CAEEL Probable S-adenosylmethionine synthetase C06E7.1 (Methionine
adenosyltransferase) (AdoMet synthetase)
Length = 404
Score = 419 bits (1078), Expect = e-117
Identities = 202/299 (67%), Positives = 241/299 (80%)
Frame = +1
Query: 22 EETFLFTSESVGEGHPDKICDQVSDAVLDAHLKQDPRAKVACETFSKTGMILIGGEITSN 201
+ FLFTSESV EGHPDK+CDQ+SDAVLDAHL QDP AKVACET +KTGMI++ GEITS
Sbjct: 3 QHKFLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSK 62
Query: 202 AVVDYQSVIRQTIKEIGFDSCEKGFDYKTCNLLIAIEQQNPEIAKSVHEERSDEDIGAGD 381
AVVDYQ ++R IK+IG+D KGFDYKTCN+L+A+EQQ+PEIA VH ++ +D+GAGD
Sbjct: 63 AVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGD 122
Query: 382 QGLMFGYATDETEELMPLTVVLAHGLNRKLAECRRNGTLPYLRPDTKTQVTVLYKSVQGA 561
QG+MFGYATDETEE MPLT++L+H LNRKL E RR+G L ++RPD+KTQVT+ Y S GA
Sbjct: 123 QGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGA 182
Query: 562 CVPIRVHTVVISTQHDENVSIDQLREDLMCHVVKTVIPEIYLDANTIYHLNPSGRFVIGG 741
CVP+RVHTVVISTQH ++S+D LR++L+ V+K VIP +D TIYHLNP G F+IGG
Sbjct: 183 CVPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYHLNPCGSFIIGG 242
Query: 742 PQGDAGLTGRKIIVDTYXXXXXXXXXXXXXKDYTKVDRSGAYAARWVAKSLVKAGLCKR 918
P GDAGLTGRKIIVDTY KD TKVDRS AYAARWVAKSLVK+GLC+R
Sbjct: 243 PMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKSGLCRR 301
>sp|Q27522|METN_CAEEL Probable S-adenosylmethionine synthetase T13A10.11 (Methionine
adenosyltransferase) (AdoMet synthetase)
Length = 404
Score = 414 bits (1063), Expect = e-115
Identities = 200/296 (67%), Positives = 239/296 (80%)
Frame = +1
Query: 31 FLFTSESVGEGHPDKICDQVSDAVLDAHLKQDPRAKVACETFSKTGMILIGGEITSNAVV 210
FLFTSESV EGHPDK+CDQ+SDAVLDAHL QDP AKVACET +KTGMI++ GEITS AVV
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 211 DYQSVIRQTIKEIGFDSCEKGFDYKTCNLLIAIEQQNPEIAKSVHEERSDEDIGAGDQGL 390
DYQ ++R IK+IG+D KGFDYKTCN+L+A+EQQ+PEIA VH ++ D+GAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDIADVGAGDQGI 125
Query: 391 MFGYATDETEELMPLTVVLAHGLNRKLAECRRNGTLPYLRPDTKTQVTVLYKSVQGACVP 570
MFGYATDETEE MPLT++L+H LN KL E RR+G L ++RPD+KTQVT+ Y S GACVP
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYSSEGGACVP 185
Query: 571 IRVHTVVISTQHDENVSIDQLREDLMCHVVKTVIPEIYLDANTIYHLNPSGRFVIGGPQG 750
+RVHTVVISTQH ++S++ LR++L+ V+K VIP +D +T+YHLNP G FV+GGP G
Sbjct: 186 LRVHTVVISTQHSPDISLEDLRKELIEKVIKVVIPGNLIDNDTVYHLNPCGSFVVGGPMG 245
Query: 751 DAGLTGRKIIVDTYXXXXXXXXXXXXXKDYTKVDRSGAYAARWVAKSLVKAGLCKR 918
DAGLTGRKIIVDTY KD TKVDRS AYAARWVAKSLVKAGLC+R
Sbjct: 246 DAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKAGLCRR 301
>sp|O17680|METM_CAEEL Probable S-adenosylmethionine synthetase C49F5.1 (Methionine
adenosyltransferase) (AdoMet synthetase)
Length = 403
Score = 404 bits (1037), Expect = e-112
Identities = 190/296 (64%), Positives = 239/296 (80%)
Frame = +1
Query: 31 FLFTSESVGEGHPDKICDQVSDAVLDAHLKQDPRAKVACETFSKTGMILIGGEITSNAVV 210
FLFTSESV EGHPDK+CDQ+SDAVLDAHLKQDP AKVACET +KTGM+++ GEITS AVV
Sbjct: 5 FLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKAVV 64
Query: 211 DYQSVIRQTIKEIGFDSCEKGFDYKTCNLLIAIEQQNPEIAKSVHEERSDEDIGAGDQGL 390
DYQ ++R+ I++IGF GFD+KTCN+L+A+EQQ+PEIA VH + ED+GAGDQG+
Sbjct: 65 DYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKDGEDVGAGDQGI 124
Query: 391 MFGYATDETEELMPLTVVLAHGLNRKLAECRRNGTLPYLRPDTKTQVTVLYKSVQGACVP 570
MFGYATDETEE MPLT++L+H +N +L + RRNGTLP++RPD+K+QVT+ Y+S GA +P
Sbjct: 125 MFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEYESRHGATIP 184
Query: 571 IRVHTVVISTQHDENVSIDQLREDLMCHVVKTVIPEIYLDANTIYHLNPSGRFVIGGPQG 750
+RVHTVV+STQH +V++++LRE ++ V+K VIP LD +T++H+NP G F++GGP G
Sbjct: 185 LRVHTVVVSTQHSPDVTLEKLRETILADVIKKVIPASLLDESTVFHINPCGTFIVGGPMG 244
Query: 751 DAGLTGRKIIVDTYXXXXXXXXXXXXXKDYTKVDRSGAYAARWVAKSLVKAGLCKR 918
DAG+TGRKIIVDTY KD TKVDRS AYAARWVA SLVKAGL KR
Sbjct: 245 DAGVTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVATSLVKAGLAKR 300
>sp|O60198|METK_SCHPO S-adenosylmethionine synthetase (Methionine adenosyltransferase)
(AdoMet synthetase)
Length = 382
Score = 400 bits (1027), Expect = e-111
Identities = 187/298 (62%), Positives = 238/298 (79%)
Frame = +1
Query: 25 ETFLFTSESVGEGHPDKICDQVSDAVLDAHLKQDPRAKVACETFSKTGMILIGGEITSNA 204
+TFLFTSESVGEGHPDKICDQ+SDA+LDA LK DP +KVACET SKTGM+++ GEIT+ +
Sbjct: 3 QTFLFTSESVGEGHPDKICDQISDAILDACLKDDPFSKVACETASKTGMVMVFGEITTRS 62
Query: 205 VVDYQSVIRQTIKEIGFDSCEKGFDYKTCNLLIAIEQQNPEIAKSVHEERSDEDIGAGDQ 384
+DYQ VIR TIK IG+D EKGFDYKTCN+L+AIEQQ+P+IA+ +H E++ E++GAGDQ
Sbjct: 63 QIDYQKVIRNTIKSIGYDDSEKGFDYKTCNVLVAIEQQSPDIAQGLHYEKALEELGAGDQ 122
Query: 385 GLMFGYATDETEELMPLTVVLAHGLNRKLAECRRNGTLPYLRPDTKTQVTVLYKSVQGAC 564
G+MFGYATDET E +PLT++LAH LN ++ RR+G+LP+LRPDTKTQVT+ Y+ GA
Sbjct: 123 GIMFGYATDETPEKLPLTILLAHKLNAAMSVARRDGSLPWLRPDTKTQVTIEYEEENGAV 182
Query: 565 VPIRVHTVVISTQHDENVSIDQLREDLMCHVVKTVIPEIYLDANTIYHLNPSGRFVIGGP 744
+P RV T+V+S QH +++S + LR +++ ++K +P LD T+YH+ PSGRFV+GGP
Sbjct: 183 IPRRVDTIVVSAQHADSISTEDLRSEILEKIIKPTVPAHLLDEKTVYHIQPSGRFVVGGP 242
Query: 745 QGDAGLTGRKIIVDTYXXXXXXXXXXXXXKDYTKVDRSGAYAARWVAKSLVKAGLCKR 918
QGDAGLTGRKIIVDTY KDY+KVDRS AYAARW+AKSLV AGL +R
Sbjct: 243 QGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYSKVDRSAAYAARWIAKSLVAAGLARR 300
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,850,197
Number of Sequences: 369166
Number of extensions: 2271874
Number of successful extensions: 6234
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5866
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9366655350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)