Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_003_B05
(634 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9IA79|BI1_PAROL Probable Bax inhibitor-1 (BI-1) 120 4e-27
sp|P55061|BI1_HUMAN Bax inhibitor-1 (BI-1) (Testis-enhanced... 114 2e-25
sp|Q5R7R1|BI1_PONPY Bax inhibitor-1 (BI-1) (Testis-enhanced... 114 2e-25
sp|Q9D2C7|BI1_MOUSE Bax inhibitor-1 (BI-1) (Testis-enhanced... 114 3e-25
sp|P55062|BI1_RAT Bax inhibitor-1 (BI-1) (Testis-enhanced g... 114 3e-25
sp|Q66RM2|BI1_PIG Bax inhibitor-1 (BI-1) (Testis-enhanced g... 112 1e-24
sp|Q9VSH3|BI1_DROME Probable Bax inhibitor-1 (BI-1) 90 4e-18
sp|Q9LD45|BI1_ARATH Bax inhibitor-1 (BI-1) (AtBI-1) 80 4e-15
sp|Q9MBD8|BI1_ORYSA Bax inhibitor-1 (BI-1) (OsBI-1) 64 3e-10
sp|Q9HC24|TMBI4_HUMAN Transmembrane BAX inhibitor motif-con... 45 1e-04
>sp|Q9IA79|BI1_PAROL Probable Bax inhibitor-1 (BI-1)
Length = 237
Score = 120 bits (300), Expect = 4e-27
Identities = 57/118 (48%), Positives = 80/118 (67%)
Frame = +3
Query: 9 TALLSTSVIFISFSLSALFNRSRXXXXXXXXXXXXXNILIVMSFLNFFIGSKMVMSAELY 188
TA L TSVIF+ F+LSAL+ + R +IL +MS +N F GS M+ A +Y
Sbjct: 116 TAFLGTSVIFVCFTLSALYAKRRSYLFLGGTLMSGLSILFLMSMMNMFFGSVMLFKAHMY 175
Query: 189 LGLAIFCLFILFDTQLIVEKKRTGDNDFIWHSLDLFLDIISIFRRIMMLLAKRNERRE 362
LGL I C F+L DTQLI+EK GD D++WHS+DLFLD I+IFR++M++LA ++ ++
Sbjct: 176 LGLLIMCGFVLXDTQLIIEKAENGDKDYVWHSVDLFLDFITIFRKLMVILALNDKDKK 233
>sp|P55061|BI1_HUMAN Bax inhibitor-1 (BI-1) (Testis-enhanced gene transcript)
(Transmembrane BAX inhibitor motif-containing protein 6)
Length = 237
Score = 114 bits (286), Expect = 2e-25
Identities = 54/120 (45%), Positives = 78/120 (65%)
Frame = +3
Query: 3 LPTALLSTSVIFISFSLSALFNRSRXXXXXXXXXXXXXNILIVMSFLNFFIGSKMVMSAE 182
LPTA + T++IF F+LSAL+ R R ++L++ S N F GS + A
Sbjct: 114 LPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSALSLLLLSSLGNVFFGSIWLFQAN 173
Query: 183 LYLGLAIFCLFILFDTQLIVEKKRTGDNDFIWHSLDLFLDIISIFRRIMMLLAKRNERRE 362
LY+GL + C F+LFDTQLI+EK GD D+IWH +DLFLD I++FR++MM+LA + ++
Sbjct: 174 LYVGLVVMCGFVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITVFRKLMMILAMNEKDKK 233
>sp|Q5R7R1|BI1_PONPY Bax inhibitor-1 (BI-1) (Testis-enhanced gene transcript)
Length = 237
Score = 114 bits (285), Expect = 2e-25
Identities = 54/120 (45%), Positives = 78/120 (65%)
Frame = +3
Query: 3 LPTALLSTSVIFISFSLSALFNRSRXXXXXXXXXXXXXNILIVMSFLNFFIGSKMVMSAE 182
LPTA + T++IF F+LSAL+ R R ++L++ S N F GS + A
Sbjct: 114 LPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSALSLLLLSSLGNVFFGSIWLFQAN 173
Query: 183 LYLGLAIFCLFILFDTQLIVEKKRTGDNDFIWHSLDLFLDIISIFRRIMMLLAKRNERRE 362
LY+GL + C F+LFDTQLI+EK GD D+IWH +DLFLD I++FR++MM+LA + ++
Sbjct: 174 LYVGLVVMCGFVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITLFRKLMMILAMNEKDKK 233
>sp|Q9D2C7|BI1_MOUSE Bax inhibitor-1 (BI-1) (Testis-enhanced gene transcript)
Length = 237
Score = 114 bits (284), Expect = 3e-25
Identities = 54/122 (44%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
Frame = +3
Query: 3 LPTALLSTSVIFISFSLSALFNRSRXXXXXXXXXXXXXNILIVMSFLNFFIGSKMVMSAE 182
LPTA + T++IF FSLSAL+ R R +++++ S N F GS + A
Sbjct: 114 LPTAFMGTAMIFTCFSLSALYARRRSYLFLGGILMSAMSLMLLSSLGNLFFGSIWLFQAN 173
Query: 183 LYLGLAIFCLFILFDTQLIVEKKRTGDNDFIWHSLDLFLDIISIFRRIMMLLA--KRNER 356
LYLGL + C F+LFDTQLI+EK GD D+IWH +DLFLD +++FR++M++LA +++++
Sbjct: 174 LYLGLLVMCGFVLFDTQLIIEKAEHGDKDYIWHCVDLFLDFVTLFRKLMLILAFNEKDKK 233
Query: 357 RE 362
+E
Sbjct: 234 KE 235
>sp|P55062|BI1_RAT Bax inhibitor-1 (BI-1) (Testis-enhanced gene transcript)
Length = 237
Score = 114 bits (284), Expect = 3e-25
Identities = 54/122 (44%), Positives = 81/122 (66%), Gaps = 2/122 (1%)
Frame = +3
Query: 3 LPTALLSTSVIFISFSLSALFNRSRXXXXXXXXXXXXXNILIVMSFLNFFIGSKMVMSAE 182
LPTA + T++IF FSLSAL+ R R +++ V S N F GS + A
Sbjct: 114 LPTAFMGTAMIFTCFSLSALYARRRSYLFLGGILMSAMSLMFVSSLGNLFFGSIWLFQAN 173
Query: 183 LYLGLAIFCLFILFDTQLIVEKKRTGDNDFIWHSLDLFLDIISIFRRIMMLLA--KRNER 356
LY+GL + C F+LFDTQLI+EK GD D+IWH +DLFLD +++FR++M++LA +++++
Sbjct: 174 LYMGLLVMCGFVLFDTQLIIEKAEHGDKDYIWHCIDLFLDFVTLFRKLMLILAFNEKDKK 233
Query: 357 RE 362
+E
Sbjct: 234 KE 235
>sp|Q66RM2|BI1_PIG Bax inhibitor-1 (BI-1) (Testis-enhanced gene transcript)
Length = 237
Score = 112 bits (279), Expect = 1e-24
Identities = 51/120 (42%), Positives = 77/120 (64%)
Frame = +3
Query: 3 LPTALLSTSVIFISFSLSALFNRSRXXXXXXXXXXXXXNILIVMSFLNFFIGSKMVMSAE 182
LPTA + T++IF F+LSAL+ R R +++++ S N F GS + A
Sbjct: 114 LPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSAMSLMVLSSLGNLFFGSIWLFQAN 173
Query: 183 LYLGLAIFCLFILFDTQLIVEKKRTGDNDFIWHSLDLFLDIISIFRRIMMLLAKRNERRE 362
LY+GL + C F+LFDTQLI+EK GD D+IWH +DLF D +++FR++MM+LA + ++
Sbjct: 174 LYVGLVVMCGFVLFDTQLIIEKAENGDKDYIWHCVDLFSDFVTLFRKLMMILAMNEKDKK 233
>sp|Q9VSH3|BI1_DROME Probable Bax inhibitor-1 (BI-1)
Length = 245
Score = 90.1 bits (222), Expect = 4e-18
Identities = 45/119 (37%), Positives = 70/119 (58%)
Frame = +3
Query: 9 TALLSTSVIFISFSLSALFNRSRXXXXXXXXXXXXXNILIVMSFLNFFIGSKMVMSAELY 188
+AL T V FIS SLSAL N + ++S N S V +LY
Sbjct: 119 SALTGTFVTFISLSLSALLAEQGKYLYLGGMLVSVINTMALLSLFNMVFKSYFVQVTQLY 178
Query: 189 LGLAIFCLFILFDTQLIVEKKRTGDNDFIWHSLDLFLDIISIFRRIMMLLAKRNERRED 365
+G+ + FI++DTQ IVEK R G+ D + H+LDLF D++S+FRR++++L ++ ER+++
Sbjct: 179 VGVFVMAAFIVYDTQNIVEKCRNGNRDVVQHALDLFFDVLSMFRRLLIILTQKEERKQN 237
>sp|Q9LD45|BI1_ARATH Bax inhibitor-1 (BI-1) (AtBI-1)
Length = 247
Score = 80.1 bits (196), Expect = 4e-15
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Frame = +3
Query: 3 LPTALLSTSVIFISFSLSALFNRSRXXXXXXXXXXXXXNILIVMSFLN-FFIGSKMVMSA 179
L TA + T++ F+ FS +A+ R R ++L+ + F + F GS +
Sbjct: 119 LITAFVGTAIAFVCFSAAAMLARRREYLYLGGLLSSGLSMLMWLQFASSIFGGSASIFKF 178
Query: 180 ELYLGLAIFCLFILFDTQLIVEKKRTGDNDFIWHSLDLFLDIISIFRRIMMLLAKRNERR 359
ELY GL IF +++ DTQ I+EK GD D++ HSL LF D +++F RI++++ K + +
Sbjct: 179 ELYFGLLIFVGYMVVDTQEIIEKAHLGDMDYVKHSLTLFTDFVAVFVRILIIMLKNSADK 238
Query: 360 ED 365
E+
Sbjct: 239 EE 240
>sp|Q9MBD8|BI1_ORYSA Bax inhibitor-1 (BI-1) (OsBI-1)
Length = 249
Score = 63.9 bits (154), Expect = 3e-10
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Frame = +3
Query: 3 LPTALLSTSVIFISFSLSALFNRSRXXXXXXXXXXXXXNILIVMSFLNFFIG-SKMVMSA 179
L TA + T++ F F+ +A+ + R +IL+ + F G S
Sbjct: 120 LVTAFVGTAIAFGCFTCAAIVAKRREYLYLGGLLSSGLSILLWLQFAASIFGHSTGSFMF 179
Query: 180 ELYLGLAIFCLFILFDTQLIVEKKRTGDNDFIWHSLDLFLDIISIFRRIMMLLAK 344
E+Y GL IF ++++DTQ I+E+ GD D+I H+L LF D +++ RI++++ K
Sbjct: 180 EVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRILVIMLK 234
>sp|Q9HC24|TMBI4_HUMAN Transmembrane BAX inhibitor motif-containing protein 4 (Z-protein)
(S1R protein)
Length = 238
Score = 45.4 bits (106), Expect = 1e-04
Identities = 23/79 (29%), Positives = 44/79 (55%)
Frame = +3
Query: 120 ILIVMSFLNFFIGSKMVMSAELYLGLAIFCLFILFDTQLIVEKKRTGDNDFIWHSLDLFL 299
IL + FL FF S+++ G +FC FI++DT ++ K +++ ++ L+L
Sbjct: 162 ILCLSGFLKFFFYSEIMELVLAAAGALLFCGFIIYDTHSLMHK--LSPEEYVLAAISLYL 219
Query: 300 DIISIFRRIMMLLAKRNER 356
DII++F ++ L N++
Sbjct: 220 DIINLFLHLLRFLEAVNKK 238
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,216,442
Number of Sequences: 369166
Number of extensions: 1276923
Number of successful extensions: 2925
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2918
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5072399280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)