Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_003_B01
(868 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precu... 276 7e-74
sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine protei... 275 1e-73
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 275 2e-73
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 270 5e-72
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 268 1e-71
sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted ... 268 1e-71
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 266 5e-71
sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathe... 265 2e-70
sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted pr... 265 2e-70
sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (C... 263 6e-70
>sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precursor
Length = 323
Score = 276 bits (705), Expect = 7e-74
Identities = 142/265 (53%), Positives = 176/265 (66%), Gaps = 6/265 (2%)
Frame = +3
Query: 3 GHHSHSLGINEFSDLTYKEFEKLYLLSKNIEYNDG--IDYLPPLNIDNLPDSVDWRTKGY 176
G + +L +N+F D+T +EF + + NI + P VDWRTKG
Sbjct: 61 GEVTFNLAMNKFGDMTLEEFNAV--MKGNIPRRSAPVSVFYPKKETGPQATEVDWRTKGA 118
Query: 177 VTNVKNQGQCGSCWAFSTTGSLEGQHFRKHKVLQNISEQQLVDCVTKNS--GCNGGWMNI 350
VT VK+QGQCGSCWAFSTTGSLEGQHF K L +++EQQLVDC GCNGGWMN
Sbjct: 119 VTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMND 178
Query: 351 AFEYI-SSHGIESEDNYPYQAKQGNCVFDKSKVVANCKGFQNINSCNEKDLAVAVATVGP 527
AF+YI +++GI++E YPY+A+ G+C FD + V A C G NI S +E L AV +GP
Sbjct: 179 AFDYIKANNGIDTEAAYPYEARDGSCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGP 238
Query: 528 ISVAIDVGYS-FQQYKQGVYYEAKCDPTIQNHAVLVVGYGVENGHKYWLVKNSWGPSWGM 704
ISV ID +S FQ Y GVYYE C P+ +HAVL VGYG E G +WLVKNSW SWG
Sbjct: 239 ISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGD 298
Query: 705 NGYIKMSKDRDNNCGIATTASFPIV 779
GYIKMS++R+NNCGIAT AS+P+V
Sbjct: 299 AGYIKMSRNRNNNCGIATVASYPLV 323
>sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine proteinase 1) [Contains: Cathepsin
L heavy chain; Cathepsin L light chain]
Length = 341
Score = 275 bits (703), Expect = 1e-73
Identities = 143/273 (52%), Positives = 190/273 (69%), Gaps = 14/273 (5%)
Frame = +3
Query: 3 GHHSHSLGINEFSDLTYKEFEKL-----YLLSKNIEYND----GIDYLPPLNIDNLPDSV 155
G S L +N+++DL + EF +L Y L K + D G+ ++ P ++ LP SV
Sbjct: 70 GKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHV-TLPKSV 128
Query: 156 DWRTKGYVTNVKNQGQCGSCWAFSTTGSLEGQHFRKHKVLQNISEQQLVDCVTK--NSGC 329
DWRTKG VT VK+QG CGSCWAFS+TG+LEGQHFRK VL ++SEQ LVDC TK N+GC
Sbjct: 129 DWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGC 188
Query: 330 NGGWMNIAFEYISSH-GIESEDNYPYQAKQGNCVFDKSKVVANCKGFQNINSCNEKDLAV 506
NGG M+ AF YI + GI++E +YPY+A +C F+K V A +GF +I +EK +A
Sbjct: 189 NGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAE 248
Query: 507 AVATVGPISVAIDVGY-SFQQYKQGVYYEAKCDPTIQNHAVLVVGYGV-ENGHKYWLVKN 680
AVATVGP+SVAID + SFQ Y +GVY E +CD +H VLVVG+G E+G YWLVKN
Sbjct: 249 AVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKN 308
Query: 681 SWGPSWGMNGYIKMSKDRDNNCGIATTASFPIV 779
SWG +WG G+IKM ++++N CGIA+ +S+P+V
Sbjct: 309 SWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 341
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 275 bits (702), Expect = 2e-73
Identities = 142/267 (53%), Positives = 179/267 (67%), Gaps = 8/267 (2%)
Frame = +3
Query: 3 GHHSHSLGINEFSDLTYKEFEKLYLLSKNIEYNDGIDYLPPLNIDNLPDSVDWRTKGYVT 182
G H ++ +N F D+T +EF ++ +N ++ G + PL +D LP SVDWR KGYVT
Sbjct: 69 GKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFREPLFLD-LPKSVDWRKKGYVT 127
Query: 183 NVKNQGQCGSCWAFSTTGSLEGQHFRKHKVLQNISEQQLVDCVTK--NSGCNGGWMNIAF 356
VKNQ QCGSCWAFS TG+LEGQ FRK L ++SEQ LVDC N GCNGG+M AF
Sbjct: 128 PVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAF 187
Query: 357 EYISSH-GIESEDNYPYQAKQGNCVFDKSKVVANCKGFQNINSCNEKDLAVAVATVGPIS 533
+Y+ + G++SE++YPY A C + VAN GF + EK L AVATVGPIS
Sbjct: 188 QYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPIS 247
Query: 534 VAIDVGY-SFQQYKQGVYYEAKCDPTIQNHAVLVVGYGVE----NGHKYWLVKNSWGPSW 698
VA+D G+ SFQ YK G+Y+E C +H VLVVGYG E N KYWLVKNSWGP W
Sbjct: 248 VAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEW 307
Query: 699 GMNGYIKMSKDRDNNCGIATTASFPIV 779
G NGY+K++KD++N+CGIAT AS+P V
Sbjct: 308 GSNGYVKIAKDKNNHCGIATAASYPNV 334
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 270 bits (689), Expect = 5e-72
Identities = 142/267 (53%), Positives = 182/267 (68%), Gaps = 8/267 (2%)
Frame = +3
Query: 3 GHHSHSLGINEFSDLTYKEFEKLYLLSKNIEYNDGIDYLPPLNIDNLPDSVDWRTKGYVT 182
G HS ++ +N F D+T +EF ++ +N + G + PL + P SVDWR KGYVT
Sbjct: 69 GKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYE-APRSVDWREKGYVT 127
Query: 183 NVKNQGQCGSCWAFSTTGSLEGQHFRKHKVLQNISEQQLVDC--VTKNSGCNGGWMNIAF 356
VKNQGQCGSCWAFS TG+LEGQ FRK L ++SEQ LVDC N GCNGG M+ AF
Sbjct: 128 PVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAF 187
Query: 357 EYISSH-GIESEDNYPYQAKQGNCVFDKSKVVANCKGFQNINSCNEKDLAVAVATVGPIS 533
+Y+ + G++SE++YPY+A + +C ++ VAN GF +I EK L AVATVGPIS
Sbjct: 188 QYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPIS 246
Query: 534 VAIDVGY-SFQQYKQGVYYEAKCDPTIQNHAVLVVGYGVE----NGHKYWLVKNSWGPSW 698
VAID G+ SF YK+G+Y+E C +H VLVVGYG E + +KYWLVKNSWG W
Sbjct: 247 VAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEW 306
Query: 699 GMNGYIKMSKDRDNNCGIATTASFPIV 779
GM GY+KM+KDR N+CGIA+ AS+P V
Sbjct: 307 GMGGYVKMAKDRRNHCGIASAASYPTV 333
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 268 bits (686), Expect = 1e-71
Identities = 143/268 (53%), Positives = 181/268 (67%), Gaps = 9/268 (3%)
Frame = +3
Query: 3 GHHSHSLGINEFSDLTYKEFEKLYLLSKNIEYNDGIDYLPPLNIDNLPDSVDWRTKGYVT 182
G H+ + +N F D+T +EF ++ +N ++ G + PL +D +P SVDW KGYVT
Sbjct: 69 GKHAFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLVD-VPKSVDWTKKGYVT 127
Query: 183 NVKNQGQCGSCWAFSTTGSLEGQHFRKHKVLQNISEQQLVDC--VTKNSGCNGGWMNIAF 356
VKNQGQCGSCWAFS TG+LEGQ FRK L ++SEQ LVDC N GCNGG M+ AF
Sbjct: 128 PVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAF 187
Query: 357 EYISSH-GIESEDNYPYQAKQGN-CVFDKSKVVANCKGFQNINSCNEKDLAVAVATVGPI 530
+YI + G++SE++YPY A N C + AN GF +I EK L AVATVGPI
Sbjct: 188 QYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIPQ-REKALMKAVATVGPI 246
Query: 531 SVAIDVGY-SFQQYKQGVYYEAKCDPTIQNHAVLVVGYGVE----NGHKYWLVKNSWGPS 695
SVAID G+ SFQ YK G+YY+ C +H VLVVGYG E N +K+W+VKNSWGP
Sbjct: 247 SVAIDAGHTSFQFYKSGIYYDPDCSCKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPE 306
Query: 696 WGMNGYIKMSKDRDNNCGIATTASFPIV 779
WG NGY+KM+KD++N+CGIAT AS+P V
Sbjct: 307 WGWNGYVKMAKDQNNHCGIATAASYPTV 334
>sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted protein) (MEP) (p39 cysteine
proteinase) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 268 bits (685), Expect = 1e-71
Identities = 140/267 (52%), Positives = 179/267 (67%), Gaps = 8/267 (2%)
Frame = +3
Query: 3 GHHSHSLGINEFSDLTYKEFEKLYLLSKNIEYNDGIDYLPPLNIDNLPDSVDWRTKGYVT 182
G H S+ +N F D+T +EF ++ ++ ++ G + PL + +P SVDWR KG VT
Sbjct: 69 GQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLML-KIPKSVDWREKGCVT 127
Query: 183 NVKNQGQCGSCWAFSTTGSLEGQHFRKHKVLQNISEQQLVDC--VTKNSGCNGGWMNIAF 356
VKNQGQCGSCWAFS +G LEGQ F K L ++SEQ LVDC N GCNGG M+ AF
Sbjct: 128 PVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAF 187
Query: 357 EYISSH-GIESEDNYPYQAKQGNCVFDKSKVVANCKGFQNINSCNEKDLAVAVATVGPIS 533
+YI + G++SE++YPY+AK G+C + VAN GF +I EK L AVATVGPIS
Sbjct: 188 QYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQ-QEKALMKAVATVGPIS 246
Query: 534 VAIDVGY-SFQQYKQGVYYEAKCDPTIQNHAVLVVGYGVE----NGHKYWLVKNSWGPSW 698
VA+D + S Q Y G+YYE C +H VL+VGYG E N +KYWLVKNSWG W
Sbjct: 247 VAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEW 306
Query: 699 GMNGYIKMSKDRDNNCGIATTASFPIV 779
GM GYIK++KDRDN+CG+AT AS+P+V
Sbjct: 307 GMEGYIKIAKDRDNHCGLATAASYPVV 333
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 266 bits (680), Expect = 5e-71
Identities = 139/268 (51%), Positives = 181/268 (67%), Gaps = 9/268 (3%)
Frame = +3
Query: 3 GHHSHSLGINEFSDLTYKEFEKLYLLSKNIEYNDGIDYLPPLNIDNLPDSVDWRTKGYVT 182
G H S+ +N F D+T +EF ++ +N ++ G + L ++ +P SVDWR KGYVT
Sbjct: 69 GKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKVFHESLVLE-VPKSVDWREKGYVT 127
Query: 183 NVKNQGQCGSCWAFSTTGSLEGQHFRKHKVLQNISEQQLVDCVTK--NSGCNGGWMNIAF 356
VKNQGQCGSCWAFS TG+LEGQ FRK L ++SEQ LVDC N GCNGG M+ AF
Sbjct: 128 AVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAF 187
Query: 357 EYISSH-GIESEDNYPYQAKQGN-CVFDKSKVVANCKGFQNINSCNEKDLAVAVATVGPI 530
+Y+ + G+++E++YPY ++ N C + AN GF +I EK L AVATVGPI
Sbjct: 188 QYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIPQ-REKALMKAVATVGPI 246
Query: 531 SVAIDVGY-SFQQYKQGVYYEAKCDPTIQNHAVLVVGYGVE----NGHKYWLVKNSWGPS 695
SVAID G+ SFQ YK G+YY+ C +H VLVVGYG E N K+W+VKNSWGP
Sbjct: 247 SVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPE 306
Query: 696 WGMNGYIKMSKDRDNNCGIATTASFPIV 779
WG NGY+KM+KD++N+CGI+T AS+P V
Sbjct: 307 WGWNGYVKMAKDQNNHCGISTAASYPTV 334
>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 339
Score = 265 bits (676), Expect = 2e-70
Identities = 137/272 (50%), Positives = 186/272 (68%), Gaps = 13/272 (4%)
Frame = +3
Query: 3 GHHSHSLGINEFSDLTYKEFEK--------LYLLSKNIEYNDGIDYLPPLNIDNLPDSVD 158
G S+ LG+N+++D+ + EF++ L L + G Y+PP ++ +P SVD
Sbjct: 69 GKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHV-TVPKSVD 127
Query: 159 WRTKGYVTNVKNQGQCGSCWAFSTTGSLEGQHFRKHKVLQNISEQQLVDCVTK--NSGCN 332
WR G VT VK+QG CGSCWAFS+TG+LEGQHFRK VL ++SEQ LVDC TK N+GCN
Sbjct: 128 WREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCN 187
Query: 333 GGWMNIAFEYISSH-GIESEDNYPYQAKQGNCVFDKSKVVANCKGFQNINSCNEKDLAVA 509
GG M+ AF YI + GI++E +YPY+ +C F+K+ + A GF +I +E+ + A
Sbjct: 188 GGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNKATIGATDTGFVDIPEGDEEKMKKA 247
Query: 510 VATVGPISVAIDVGY-SFQQYKQGVYYEAKCDPTIQNHAVLVVGYGV-ENGHKYWLVKNS 683
VAT+GP+SVAID + SFQ Y +GVY E +CD +H VLVVGYG E+G YWLVKNS
Sbjct: 248 VATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNS 307
Query: 684 WGPSWGMNGYIKMSKDRDNNCGIATTASFPIV 779
WG +WG GYIKM+++++N CGIAT +S+P V
Sbjct: 308 WGTTWGEQGYIKMARNQNNQCGIATASSYPTV 339
>sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted protein) (MEP) (Cyclic
protein 2) (CP-2) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 265 bits (676), Expect = 2e-70
Identities = 139/267 (52%), Positives = 179/267 (67%), Gaps = 8/267 (2%)
Frame = +3
Query: 3 GHHSHSLGINEFSDLTYKEFEKLYLLSKNIEYNDGIDYLPPLNIDNLPDSVDWRTKGYVT 182
G H ++ +N F D+T +EF ++ ++ ++ G + PL + +P +VDWR KG VT
Sbjct: 69 GKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQEPLMLQ-IPKTVDWREKGCVT 127
Query: 183 NVKNQGQCGSCWAFSTTGSLEGQHFRKHKVLQNISEQQLVDCV--TKNSGCNGGWMNIAF 356
VKNQGQCGSCWAFS +G LEGQ F K L ++SEQ LVDC N GCNGG M+ AF
Sbjct: 128 PVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAF 187
Query: 357 EYISSH-GIESEDNYPYQAKQGNCVFDKSKVVANCKGFQNINSCNEKDLAVAVATVGPIS 533
+YI + G++SE++YPY+AK G+C + VAN GF +I EK L AVATVGPIS
Sbjct: 188 QYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTGFVDIPQ-QEKALMKAVATVGPIS 246
Query: 534 VAIDVGY-SFQQYKQGVYYEAKCDPTIQNHAVLVVGYGVE----NGHKYWLVKNSWGPSW 698
VA+D + S Q Y G+YYE C +H VLVVGYG E N KYWLVKNSWG W
Sbjct: 247 VAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEW 306
Query: 699 GMNGYIKMSKDRDNNCGIATTASFPIV 779
GM+GYIK++KDR+N+CG+AT AS+PIV
Sbjct: 307 GMDGYIKIAKDRNNHCGLATAASYPIV 333
>sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (Cathepsin X) (Cathepsin O2)
Length = 329
Score = 263 bits (671), Expect = 6e-70
Identities = 130/262 (49%), Positives = 179/262 (68%), Gaps = 5/262 (1%)
Frame = +3
Query: 3 GHHSHSLGINEFSDLTYKEF-EKLYLLSKNIEYNDGID--YLPPLNIDNLPDSVDWRTKG 173
G H++ L +N D+T +E +K+ L + ++ D Y+P PDSVD+R KG
Sbjct: 67 GVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWE-GRAPDSVDYRKKG 125
Query: 174 YVTNVKNQGQCGSCWAFSTTGSLEGQHFRKHKVLQNISEQQLVDCVTKNSGCNGGWMNIA 353
YVT VKNQGQCGSCWAFS+ G+LEGQ +K L N+S Q LVDCV++N GC GG+M A
Sbjct: 126 YVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNA 185
Query: 354 FEYI-SSHGIESEDNYPYQAKQGNCVFDKSKVVANCKGFQNINSCNEKDLAVAVATVGPI 530
F+Y+ + GI+SED YPY ++ +C+++ + A C+G++ I NEK L AVA VGP+
Sbjct: 186 FQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPV 245
Query: 531 SVAIDVGY-SFQQYKQGVYYEAKCDPTIQNHAVLVVGYGVENGHKYWLVKNSWGPSWGMN 707
SVAID SFQ Y +GVYY+ C+ NHAVL VGYG++ G+K+W++KNSWG +WG
Sbjct: 246 SVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNK 305
Query: 708 GYIKMSKDRDNNCGIATTASFP 773
GYI M+++++N CGIA ASFP
Sbjct: 306 GYILMARNKNNACGIANLASFP 327
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,201,907
Number of Sequences: 369166
Number of extensions: 2165794
Number of successful extensions: 6256
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5615
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8550075140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)