Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_P19
(781 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P62140|PP1B_HUMAN Serine/threonine protein phosphatase P... 503 e-142
sp|Q8MJ47|PP1B_CANFA Serine/threonine protein phosphatase P... 499 e-141
sp|P48462|PP1B_DROME Serine/threonine protein phosphatase b... 491 e-139
sp|P62139|PP1A_RABIT Serine/threonine protein phosphatase P... 491 e-139
sp|P62137|PP1A_MOUSE Serine/threonine protein phosphatase P... 490 e-138
sp|P36873|PP1G_HUMAN Serine/threonine protein phosphatase P... 490 e-138
sp|P63088|PP1G_RAT Serine/threonine protein phosphatase PP1... 490 e-138
sp|Q8MJ46|PP1G_CANFA Serine/threonine protein phosphatase P... 486 e-137
sp|P36874|PP1G_XENLA Serine/threonine protein phosphatase P... 486 e-137
sp|P48727|YMEX_CAEEL Putative serine/threonine protein phos... 484 e-136
>sp|P62140|PP1B_HUMAN Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
sp|P62142|PP1B_RAT Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
sp|P62143|PP1B_RABIT Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
sp|P61292|PP1B_PIG Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
sp|P62207|PP1B_CHICK Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
sp|P62141|PP1B_MOUSE Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
Length = 327
Score = 503 bits (1296), Expect = e-142
Identities = 231/260 (88%), Positives = 250/260 (96%)
Frame = +2
Query: 2 MKEDEIRALCLKSKEIFLNQNVLLELEAPIKICGDIHGQYTDLLRLFEYGGFPPDSNYLF 181
M E E+R LC+KS+EIFL+Q +LLELEAP+KICGDIHGQYTDLLRLFEYGGFPP++NYLF
Sbjct: 29 MTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLF 88
Query: 182 LGDYVDRGKFSLETICLLLAYKIKYPENFFLLRGNHESAAINRIYGFYDECKRRFTIKLW 361
LGDYVDRGK SLETICLLLAYKIKYPENFFLLRGNHE A+INRIYGFYDECKRRF IKLW
Sbjct: 89 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIKLW 148
Query: 362 KTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRKITRPTEIPDTGLLCDILWSDP 541
KTFTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIR+I RPT++PDTGLLCD+LWSDP
Sbjct: 149 KTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDP 208
Query: 542 DKEVEAWGENDRGVSFTFGSDIVSKFLNRHDLDLICRAHQVVEDGYEFFARRQLVTLFSA 721
DK+V+ WGENDRGVSFTFG+D+VSKFLNRHDLDLICRAHQVVEDGYEFFA+RQLVTLFSA
Sbjct: 209 DKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSA 268
Query: 722 PNYCGEFDNAGGMMSVDENL 781
PNYCGEFDNAGGMMSVDE L
Sbjct: 269 PNYCGEFDNAGGMMSVDETL 288
>sp|Q8MJ47|PP1B_CANFA Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
Length = 327
Score = 499 bits (1285), Expect = e-141
Identities = 229/260 (88%), Positives = 248/260 (95%)
Frame = +2
Query: 2 MKEDEIRALCLKSKEIFLNQNVLLELEAPIKICGDIHGQYTDLLRLFEYGGFPPDSNYLF 181
M E E+R LC+KS+EIFL+Q +LLELEAP+KICGDIHGQY DLLRLFEYGGFPP++NYLF
Sbjct: 29 MTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHGQYADLLRLFEYGGFPPEANYLF 88
Query: 182 LGDYVDRGKFSLETICLLLAYKIKYPENFFLLRGNHESAAINRIYGFYDECKRRFTIKLW 361
LGDYVDRGK SLETICLLLAYKIKYPENFFLLRGNHE A+INRIYGFYDECKRRF IKLW
Sbjct: 89 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIKLW 148
Query: 362 KTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRKITRPTEIPDTGLLCDILWSDP 541
KTFTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIR+I RPT++PDTGLLCD+LWSDP
Sbjct: 149 KTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDP 208
Query: 542 DKEVEAWGENDRGVSFTFGSDIVSKFLNRHDLDLICRAHQVVEDGYEFFARRQLVTLFSA 721
DK+V+ WGENDRGVSFTFG+D+VSKFLNRHDLDLICRAHQVVEDGYEFFA+RQLV LFSA
Sbjct: 209 DKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVILFSA 268
Query: 722 PNYCGEFDNAGGMMSVDENL 781
PNYCGEFDNAGGMMSVDE L
Sbjct: 269 PNYCGEFDNAGGMMSVDETL 288
>sp|P48462|PP1B_DROME Serine/threonine protein phosphatase beta isoform (Flap wing
protein)
Length = 330
Score = 491 bits (1265), Expect = e-139
Identities = 225/260 (86%), Positives = 245/260 (94%)
Frame = +2
Query: 2 MKEDEIRALCLKSKEIFLNQNVLLELEAPIKICGDIHGQYTDLLRLFEYGGFPPDSNYLF 181
M E E+R LCLKS+EIFL Q +LLELEAP+ ICGDIHGQYTDLLRLFEYGGFPP +NYLF
Sbjct: 29 MTEAEVRGLCLKSREIFLQQPILLELEAPLIICGDIHGQYTDLLRLFEYGGFPPAANYLF 88
Query: 182 LGDYVDRGKFSLETICLLLAYKIKYPENFFLLRGNHESAAINRIYGFYDECKRRFTIKLW 361
LGDYVDRGK SLETICLLLAYKIKYPENFFLLRGNHE A+INRIYGFYDECKRR+ +KLW
Sbjct: 89 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNVKLW 148
Query: 362 KTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRKITRPTEIPDTGLLCDILWSDP 541
KTFTDCFNCLP+AAIIDEKIFCCHGGLSPDLQ MEQIR++ RPT++PDTGLLCD+LWSDP
Sbjct: 149 KTFTDCFNCLPVAAIIDEKIFCCHGGLSPDLQGMEQIRRLMRPTDVPDTGLLCDLLWSDP 208
Query: 542 DKEVEAWGENDRGVSFTFGSDIVSKFLNRHDLDLICRAHQVVEDGYEFFARRQLVTLFSA 721
DK+V+ WGENDRGVSFTFG D+VSKFLNRH+LDLICRAHQVVEDGYEFFARRQLVTLFSA
Sbjct: 209 DKDVQGWGENDRGVSFTFGVDVVSKFLNRHELDLICRAHQVVEDGYEFFARRQLVTLFSA 268
Query: 722 PNYCGEFDNAGGMMSVDENL 781
PNYCGEFDNAGGMM+VD+ L
Sbjct: 269 PNYCGEFDNAGGMMTVDDTL 288
>sp|P62139|PP1A_RABIT Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
sp|P62136|PP1A_HUMAN Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
sp|P62138|PP1A_RAT Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
Length = 330
Score = 491 bits (1265), Expect = e-139
Identities = 225/260 (86%), Positives = 248/260 (95%)
Frame = +2
Query: 2 MKEDEIRALCLKSKEIFLNQNVLLELEAPIKICGDIHGQYTDLLRLFEYGGFPPDSNYLF 181
+ E+EIR LCLKS+EIFL+Q +LLELEAP+KICGDIHGQY DLLRLFEYGGFPP+SNYLF
Sbjct: 30 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 89
Query: 182 LGDYVDRGKFSLETICLLLAYKIKYPENFFLLRGNHESAAINRIYGFYDECKRRFTIKLW 361
LGDYVDRGK SLETICLLLAYKIKYPENFFLLRGNHE A+INRIYGFYDECKRR+ IKLW
Sbjct: 90 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLW 149
Query: 362 KTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRKITRPTEIPDTGLLCDILWSDP 541
KTFTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIR+I RPT++PD GLLCD+LWSDP
Sbjct: 150 KTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDP 209
Query: 542 DKEVEAWGENDRGVSFTFGSDIVSKFLNRHDLDLICRAHQVVEDGYEFFARRQLVTLFSA 721
DK+V+ WGENDRGVSFTFG+++V+KFL++HDLDLICRAHQVVEDGYEFFA+RQLVTLFSA
Sbjct: 210 DKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSA 269
Query: 722 PNYCGEFDNAGGMMSVDENL 781
PNYCGEFDNAG MMSVDE L
Sbjct: 270 PNYCGEFDNAGAMMSVDETL 289
>sp|P62137|PP1A_MOUSE Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
Length = 330
Score = 490 bits (1262), Expect = e-138
Identities = 224/260 (86%), Positives = 248/260 (95%)
Frame = +2
Query: 2 MKEDEIRALCLKSKEIFLNQNVLLELEAPIKICGDIHGQYTDLLRLFEYGGFPPDSNYLF 181
+ E+EIR LCLKS+EIFL+Q +LLELEAP+KICGDIHGQY DLLRLFEYGGFPP+SNYLF
Sbjct: 30 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 89
Query: 182 LGDYVDRGKFSLETICLLLAYKIKYPENFFLLRGNHESAAINRIYGFYDECKRRFTIKLW 361
LGDYVDRGK SLETICLLLAYKI+YPENFFLLRGNHE A+INRIYGFYDECKRR+ IKLW
Sbjct: 90 LGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLW 149
Query: 362 KTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRKITRPTEIPDTGLLCDILWSDP 541
KTFTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIR+I RPT++PD GLLCD+LWSDP
Sbjct: 150 KTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDP 209
Query: 542 DKEVEAWGENDRGVSFTFGSDIVSKFLNRHDLDLICRAHQVVEDGYEFFARRQLVTLFSA 721
DK+V+ WGENDRGVSFTFG+++V+KFL++HDLDLICRAHQVVEDGYEFFA+RQLVTLFSA
Sbjct: 210 DKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSA 269
Query: 722 PNYCGEFDNAGGMMSVDENL 781
PNYCGEFDNAG MMSVDE L
Sbjct: 270 PNYCGEFDNAGAMMSVDETL 289
>sp|P36873|PP1G_HUMAN Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
Length = 323
Score = 490 bits (1262), Expect = e-138
Identities = 225/260 (86%), Positives = 248/260 (95%)
Frame = +2
Query: 2 MKEDEIRALCLKSKEIFLNQNVLLELEAPIKICGDIHGQYTDLLRLFEYGGFPPDSNYLF 181
++E+EIR LCLKS+EIFL+Q +LLELEAP+KICGDIHGQY DLLRLFEYGGFPP+SNYLF
Sbjct: 30 LQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 89
Query: 182 LGDYVDRGKFSLETICLLLAYKIKYPENFFLLRGNHESAAINRIYGFYDECKRRFTIKLW 361
LGDYVDRGK SLETICLLLAYKIKYPENFFLLRGNHE A+INRIYGFYDECKRR+ IKLW
Sbjct: 90 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLW 149
Query: 362 KTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRKITRPTEIPDTGLLCDILWSDP 541
KTFTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIR+I RPT++PD GLLCD+LWSDP
Sbjct: 150 KTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDP 209
Query: 542 DKEVEAWGENDRGVSFTFGSDIVSKFLNRHDLDLICRAHQVVEDGYEFFARRQLVTLFSA 721
DK+V WGENDRGVSFTFG+++V+KFL++HDLDLICRAHQVVEDGYEFFA+RQLVTLFSA
Sbjct: 210 DKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSA 269
Query: 722 PNYCGEFDNAGGMMSVDENL 781
PNYCGEFDNAG MMSVDE L
Sbjct: 270 PNYCGEFDNAGAMMSVDETL 289
>sp|P63088|PP1G_RAT Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
sp|P61287|PP1G_BOVIN Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
sp|P63087|PP1G_MOUSE Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
Length = 323
Score = 490 bits (1262), Expect = e-138
Identities = 225/260 (86%), Positives = 248/260 (95%)
Frame = +2
Query: 2 MKEDEIRALCLKSKEIFLNQNVLLELEAPIKICGDIHGQYTDLLRLFEYGGFPPDSNYLF 181
++E+EIR LCLKS+EIFL+Q +LLELEAP+KICGDIHGQY DLLRLFEYGGFPP+SNYLF
Sbjct: 30 LQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 89
Query: 182 LGDYVDRGKFSLETICLLLAYKIKYPENFFLLRGNHESAAINRIYGFYDECKRRFTIKLW 361
LGDYVDRGK SLETICLLLAYKIKYPENFFLLRGNHE A+INRIYGFYDECKRR+ IKLW
Sbjct: 90 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLW 149
Query: 362 KTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRKITRPTEIPDTGLLCDILWSDP 541
KTFTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIR+I RPT++PD GLLCD+LWSDP
Sbjct: 150 KTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDP 209
Query: 542 DKEVEAWGENDRGVSFTFGSDIVSKFLNRHDLDLICRAHQVVEDGYEFFARRQLVTLFSA 721
DK+V WGENDRGVSFTFG+++V+KFL++HDLDLICRAHQVVEDGYEFFA+RQLVTLFSA
Sbjct: 210 DKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSA 269
Query: 722 PNYCGEFDNAGGMMSVDENL 781
PNYCGEFDNAG MMSVDE L
Sbjct: 270 PNYCGEFDNAGAMMSVDETL 289
>sp|Q8MJ46|PP1G_CANFA Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
Length = 323
Score = 486 bits (1252), Expect = e-137
Identities = 223/260 (85%), Positives = 246/260 (94%)
Frame = +2
Query: 2 MKEDEIRALCLKSKEIFLNQNVLLELEAPIKICGDIHGQYTDLLRLFEYGGFPPDSNYLF 181
++E+EIR LCLKS+EIFL+Q +LLELEAP+KICGDIHGQY DLLRLFEYGGFPP+SNYLF
Sbjct: 30 LQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 89
Query: 182 LGDYVDRGKFSLETICLLLAYKIKYPENFFLLRGNHESAAINRIYGFYDECKRRFTIKLW 361
LGDYVDRGK SLETICLLLAYKIKYPENFFLLRGNHE +INRIYGFYDECKRR+ IKLW
Sbjct: 90 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECVSINRIYGFYDECKRRYNIKLW 149
Query: 362 KTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRKITRPTEIPDTGLLCDILWSDP 541
KTFTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIR+I RPT++PD GLLCD+LWSDP
Sbjct: 150 KTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDP 209
Query: 542 DKEVEAWGENDRGVSFTFGSDIVSKFLNRHDLDLICRAHQVVEDGYEFFARRQLVTLFSA 721
DK+V WGE DRGVSFTFG+++V+KFL++HDLDLICRAHQVVEDGYEFFA+RQLVTLFSA
Sbjct: 210 DKDVLGWGETDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSA 269
Query: 722 PNYCGEFDNAGGMMSVDENL 781
PNYCGEFDNAG MMSVDE L
Sbjct: 270 PNYCGEFDNAGAMMSVDETL 289
>sp|P36874|PP1G_XENLA Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G)
Length = 323
Score = 486 bits (1252), Expect = e-137
Identities = 223/260 (85%), Positives = 247/260 (95%)
Frame = +2
Query: 2 MKEDEIRALCLKSKEIFLNQNVLLELEAPIKICGDIHGQYTDLLRLFEYGGFPPDSNYLF 181
++E+EIR LCLKS+EIFL+Q +LLELEAP+KICGDIHGQY DLLRLFEYGGFPP+SNYLF
Sbjct: 30 LQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 89
Query: 182 LGDYVDRGKFSLETICLLLAYKIKYPENFFLLRGNHESAAINRIYGFYDECKRRFTIKLW 361
LGDYVDRGK SLETICLLLAYKIKYPENFFLLRGNHE A+INRIYGFYDECKRR+ IKLW
Sbjct: 90 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLW 149
Query: 362 KTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRKITRPTEIPDTGLLCDILWSDP 541
KTFTDCFNCLPIAAI+DEKIFCCHGGLSPDLQSMEQIR+I RPT++PD GLLCD+LWSDP
Sbjct: 150 KTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDP 209
Query: 542 DKEVEAWGENDRGVSFTFGSDIVSKFLNRHDLDLICRAHQVVEDGYEFFARRQLVTLFSA 721
DK++ WGEN RGVSFTFG+++V+KFL++HDLDLICRAHQVVEDGYEFFA+RQLVTLFSA
Sbjct: 210 DKDILGWGENYRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSA 269
Query: 722 PNYCGEFDNAGGMMSVDENL 781
PNYCGEFDNAG MMSVDE L
Sbjct: 270 PNYCGEFDNAGAMMSVDETL 289
>sp|P48727|YMEX_CAEEL Putative serine/threonine protein phosphatase F56C9.1 in chromosome
III
Length = 333
Score = 484 bits (1246), Expect = e-136
Identities = 221/260 (85%), Positives = 244/260 (93%)
Frame = +2
Query: 2 MKEDEIRALCLKSKEIFLNQNVLLELEAPIKICGDIHGQYTDLLRLFEYGGFPPDSNYLF 181
+ E EI+ LC KS+EIFL+Q +LLELEAP+KICGD+HGQY DLLRLFEYGGFPP+SNYLF
Sbjct: 29 LTESEIKGLCQKSREIFLSQPILLELEAPLKICGDVHGQYYDLLRLFEYGGFPPESNYLF 88
Query: 182 LGDYVDRGKFSLETICLLLAYKIKYPENFFLLRGNHESAAINRIYGFYDECKRRFTIKLW 361
LGDYVDRGK SLETICLLLAYKIKYPENFFLLRGNHE A+INRIYGFYDECKRR+ IKLW
Sbjct: 89 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLW 148
Query: 362 KTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQSMEQIRKITRPTEIPDTGLLCDILWSDP 541
KTFTDCFNCLP+AAIIDEKIFCCHGGLSPDLQSMEQIR+I RPT++PD GLLCD+LWSDP
Sbjct: 149 KTFTDCFNCLPVAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDP 208
Query: 542 DKEVEAWGENDRGVSFTFGSDIVSKFLNRHDLDLICRAHQVVEDGYEFFARRQLVTLFSA 721
DK+V WGENDRGVSFTFG ++V+KFL++HDLDLICRAHQVVEDGYEFFA+RQLVTLFSA
Sbjct: 209 DKDVTGWGENDRGVSFTFGPEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSA 268
Query: 722 PNYCGEFDNAGGMMSVDENL 781
PNYCGEFDNAG MM+VDE L
Sbjct: 269 PNYCGEFDNAGSMMTVDETL 288
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,616,573
Number of Sequences: 369166
Number of extensions: 1972043
Number of successful extensions: 5293
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5115
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7308943600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)