Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_P06
(423 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q99MI9|ANMX_CRILO Protein arginine N-methyltransferase 43 3e-04
sp|Q922X9|ANMX_MOUSE Protein arginine N-methyltransferase 42 4e-04
sp|Q9NVM4|ANMX_HUMAN Protein arginine N-methyltransferase 40 0.003
sp|Q9BQT9|CSTN3_HUMAN Calsyntenin-3 precursor 33 0.32
sp|Q9NIV1|E2AK3_DROME Eukaryotic translation initiation fac... 30 1.6
sp|Q9HTZ7|PPCK_PSEAE Phosphoenolpyruvate carboxykinase [ATP... 30 1.6
sp|P10070|GLI2_HUMAN Zinc finger protein GLI2 (Tax helper p... 29 3.5
sp|Q88AZ4|PPCK_PSESM Phosphoenolpyruvate carboxykinase [ATP... 29 3.5
sp|Q91661|GLI4_XENLA Zinc finger protein GLI4 (Neural-speci... 29 3.5
sp|O74851|ADG3_SCHPO Protein adg3 precursor 29 4.6
>sp|Q99MI9|ANMX_CRILO Protein arginine N-methyltransferase
Length = 729
Score = 42.7 bits (99), Expect = 3e-04
Identities = 27/93 (29%), Positives = 39/93 (41%)
Frame = -1
Query: 408 LWEYECFAKSEISDLIVVDMTDSIGELIEGNVTELEGVCAFKSVDFSEINGLVLWTAWEL 229
LWEY C + SE ++ D + + EG + S +G VLW + L
Sbjct: 603 LWEYPCRSLSEPQQILTFDFQQPVPQ----KPVHAEGSMELRRPGKS--HGAVLWMEYHL 656
Query: 228 AANVSVDTSLQSIDSTSGKMMWKPFSKQAVHIL 130
+ +V T L + G W P KQAV+ L
Sbjct: 657 TPDSTVSTGLMNPLEDKGDCCWNPHCKQAVYFL 689
>sp|Q922X9|ANMX_MOUSE Protein arginine N-methyltransferase
Length = 692
Score = 42.4 bits (98), Expect = 4e-04
Identities = 26/93 (27%), Positives = 42/93 (45%)
Frame = -1
Query: 408 LWEYECFAKSEISDLIVVDMTDSIGELIEGNVTELEGVCAFKSVDFSEINGLVLWTAWEL 229
LWEY C + S+ +++ D I + + +E KS +G VLW ++L
Sbjct: 566 LWEYPCRSLSKPQEILTFDFQQPIPQQPMQSKGTMELTRPGKS------HGAVLWMEYQL 619
Query: 228 AANVSVDTSLQSIDSTSGKMMWKPFSKQAVHIL 130
+ ++ T L + G W P KQAV+ L
Sbjct: 620 TPDSTISTGLINPAEDKGDCCWNPHCKQAVYFL 652
>sp|Q9NVM4|ANMX_HUMAN Protein arginine N-methyltransferase
Length = 692
Score = 39.7 bits (91), Expect = 0.003
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Frame = -1
Query: 408 LWEYECFAKSEISDLIVVDMTDSIGELIEGNVTELEGVCAFKSVDF---SEINGLVLWTA 238
LWEY C + SE ++ D + L+ +CA +V+ + + VLW
Sbjct: 566 LWEYPCRSLSEPWQILTFDFQQPV---------PLQPLCAEGTVELRRPGQSHAAVLWME 616
Query: 237 WELAANVSVDTSLQSIDSTSGKMMWKPFSKQAVH 136
+ L ++ T L G W P KQAV+
Sbjct: 617 YHLTPECTLSTGLLEPADPEGGCCWNPHCKQAVY 650
>sp|Q9BQT9|CSTN3_HUMAN Calsyntenin-3 precursor
Length = 956
Score = 32.7 bits (73), Expect = 0.32
Identities = 24/93 (25%), Positives = 40/93 (43%)
Frame = -1
Query: 402 EYECFAKSEISDLIVVDMTDSIGELIEGNVTELEGVCAFKSVDFSEINGLVLWTAWELAA 223
E C + E+ +VV D+ L+ G A +VDF NG+ L+ ++
Sbjct: 620 EESCVSIPEVEGYVVVLQPDAPQILLSGTAH-----FARPAVDFEGTNGVPLFPDLQITC 674
Query: 222 NVSVDTSLQSIDSTSGKMMWKPFSKQAVHILDG 124
++S + +S G + S + VH LDG
Sbjct: 675 SISHQVEAKKDESWQGTVTDTRMSDEIVHNLDG 707
>sp|Q9NIV1|E2AK3_DROME Eukaryotic translation initiation factor 2-alpha kinase precursor
(PRKR-like endoplasmic reticulum kinase) (PERK) (PEK)
(DmPEK)
Length = 1162
Score = 30.4 bits (67), Expect = 1.6
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +2
Query: 212 TETFAANSQAVHNTRPLISEKSTDLNAQTPSNSVTLPSINSPIESVMSTTIKSLISDFAK 391
TET Q + + L E ST + +TP +S T+PS+ ++ + S +SD A
Sbjct: 708 TETPPTGWQEEEDRKLLAHELSTSIQIETPDDS-TMPSLTEQLKEKRQQQLLSWVSDAAN 766
Query: 392 HSYSHRNF 415
+ +F
Sbjct: 767 STACSHDF 774
>sp|Q9HTZ7|PPCK_PSEAE Phosphoenolpyruvate carboxykinase [ATP] (PEP carboxykinase)
(Phosphoenolpyruvate carboxylase) (PEPCK)
Length = 513
Score = 30.4 bits (67), Expect = 1.6
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = -1
Query: 324 EGNVTELEGVCAFKSVDFSEINGLVLWTAWELAA---NVSVD 208
EG V +EG C K +D SE N V+W A + A NV +D
Sbjct: 247 EGVVFNVEGGCYAKCIDLSEKNEPVIWKAIKFGAVLENVVLD 288
>sp|P10070|GLI2_HUMAN Zinc finger protein GLI2 (Tax helper protein)
Length = 1258
Score = 29.3 bits (64), Expect = 3.5
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +2
Query: 263 ISEKSTDLNAQTPSNSVTLPSINSPIESVMSTTIKSLISDFAKHS 397
+S+ S+ L TP NS+TLPSI + I ++ + S+++ A+ S
Sbjct: 1209 LSQNSSRLT--TPRNSLTLPSIPAGISNMAVGDMSSMLTSLAEES 1251
>sp|Q88AZ4|PPCK_PSESM Phosphoenolpyruvate carboxykinase [ATP] (PEP carboxykinase)
(Phosphoenolpyruvate carboxylase) (PEPCK)
Length = 514
Score = 29.3 bits (64), Expect = 3.5
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -1
Query: 321 GNVTELEGVCAFKSVDFSEINGLVLWTAWELAA---NVSVDTSLQSID 187
G V +EG C K +D SE N V+W A + A NV +D ++ D
Sbjct: 248 GVVFNIEGGCYAKCIDLSEKNEPVIWKAIQHGAVLENVVLDPVTKTAD 295
>sp|Q91661|GLI4_XENLA Zinc finger protein GLI4 (Neural-specific DNA-binding protein xGLI4)
(xGLI-4)
Length = 1361
Score = 29.3 bits (64), Expect = 3.5
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 260 LISEKSTDLNAQTPSNSVTLPSINSPIESVMSTTIKSLISDFAKHS 397
L S T TP NS+TLPSI + I ++ + S+++ A+ S
Sbjct: 1309 LQSFSQTSSRLTTPRNSLTLPSIPAGINNMAIGDMSSMLTTLAEES 1354
>sp|O74851|ADG3_SCHPO Protein adg3 precursor
Length = 1131
Score = 28.9 bits (63), Expect = 4.6
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 209 STETFAANSQAVHNTRPLISEKS--TDLNAQTPSNSVTLPSINSPIESVMSTTIKSLISD 382
++E A + + + P I++ S T +++Q+ NS S +SPI S T+ S+IS
Sbjct: 772 ASEPQTAFTSSSSSATPTITQSSISTSVSSQSSMNS----SYSSPISSNSVTSSTSIISS 827
Query: 383 FAKHSYS 403
A SY+
Sbjct: 828 IASSSYT 834
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,678,768
Number of Sequences: 369166
Number of extensions: 1057012
Number of successful extensions: 3511
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3508
length of database: 68,354,980
effective HSP length: 99
effective length of database: 50,066,215
effective search space used: 2052714815
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)