Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_K20
(209 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P26624|GST28_SCHJA Glutathione S-transferase 28 kDa (GST... 67 1e-11
sp|P09792|GST28_SCHMA Glutathione S-transferase 28 kDa (GST... 59 3e-09
sp|P30114|GST28_SCHHA Glutathione S-transferase 28 kDa (GST... 59 5e-09
sp|P46429|GST2_MANSE Glutathione S-transferase 2 (GST class... 57 1e-08
sp|P30113|GST28_SCHBO Glutathione S-transferase 28 kDa (GST... 56 3e-08
sp|O16116|GST3_CAEEL Glutathione S-transferase 3 (GST class... 53 2e-07
sp|P46088|GST_OMMSL Glutathione S-transferase (GST class-si... 52 3e-07
sp|P91252|GST6_CAEEL Probable glutathione S-transferase 6 (... 51 7e-07
sp|Q21355|GST4_CAEEL Glutathione S-transferase 4 (GST class... 50 1e-06
sp|P81706|GSTA1_CAVPO Glutathione S-transferase A (GST A) (... 50 2e-06
>sp|P26624|GST28_SCHJA Glutathione S-transferase 28 kDa (GST 28) (SJ28 antigen) (GST
class-mu)
Length = 206
Score = 67.0 bits (162), Expect = 1e-11
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Frame = +2
Query: 5 VKPTTPTGKLPVVEYEGKK-----LTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMV 169
+KPT P G+LP+V+ K+ +++S+AIAR IARK+ MG+ D EYY+IE+ IGQ+
Sbjct: 39 IKPTIPGGRLPIVKITDKRGDVKTMSESLAIARFIARKHNMMGDTDDEYYIIEKMIGQVE 98
Query: 170 DVLEGMYKIYFAP 208
DV +K P
Sbjct: 99 DVESEYHKTLIKP 111
>sp|P09792|GST28_SCHMA Glutathione S-transferase 28 kDa (GST 28) (SM28 antigen)
(Protective 28 kDa antigen) (GST class-mu)
Length = 211
Score = 59.3 bits (142), Expect = 3e-09
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Frame = +2
Query: 5 VKPTTPTGKLPVVEYEG-----KKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMV 169
+KPT P G+LP V+ K + +S+AIAR +A+K+ MGE D+EYY +E+ IGQ
Sbjct: 44 IKPTIPGGRLPAVKVTDDHGHVKWMLESLAIARYMAKKHHMMGETDEEYYSVEKLIGQAE 103
Query: 170 DVLEGMYKIYFAP 208
DV +K P
Sbjct: 104 DVEHEYHKTLMKP 116
>sp|P30114|GST28_SCHHA Glutathione S-transferase 28 kDa (GST 28) (GST class-mu)
Length = 211
Score = 58.5 bits (140), Expect = 5e-09
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Frame = +2
Query: 5 VKPTTPTGKLPVVEYEG-----KKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMV 169
+KPT P G+LP V+ K + +S+AIAR +A+K+ MGE D+EYY +E+ IGQ+
Sbjct: 44 IKPTIPGGRLPAVKITDNHGHVKWMLESLAIARYMAKKHHMMGETDEEYYNVEKLIGQVE 103
Query: 170 DVLEGMYKIYFAP 208
D+ +K P
Sbjct: 104 DLEHEYHKTLMKP 116
>sp|P46429|GST2_MANSE Glutathione S-transferase 2 (GST class-sigma)
Length = 203
Score = 57.0 bits (136), Expect = 1e-08
Identities = 25/58 (43%), Positives = 40/58 (68%)
Frame = +2
Query: 2 DVKPTTPTGKLPVVEYEGKKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMVDV 175
+ KP TP G++PV+E +GKK QS+AI+R + RKYG G D +E + I++ + + D+
Sbjct: 40 EFKPNTPFGQMPVLEIDGKKYAQSLAISRYLGRKYGLAGNDIEEDFEIDQIVDFVNDI 97
>sp|P30113|GST28_SCHBO Glutathione S-transferase 28 kDa (GST 28) (GST class-mu)
Length = 211
Score = 55.8 bits (133), Expect = 3e-08
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Frame = +2
Query: 5 VKPTTPTGKLPVVEYEG-----KKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMV 169
+KPT P G+LP V+ K + +S+AIAR +A+K+ MG ++EYY +E+ IGQ
Sbjct: 44 IKPTIPGGRLPAVKITDNHGHVKWMVESLAIARYMAKKHHMMGGTEEEYYNVEKLIGQAE 103
Query: 170 DVLEGMYKIYFAP 208
D+ YK P
Sbjct: 104 DLEHEYYKTLMKP 116
>sp|O16116|GST3_CAEEL Glutathione S-transferase 3 (GST class-sigma) (CeGST3)
Length = 207
Score = 53.1 bits (126), Expect = 2e-07
Identities = 24/67 (35%), Positives = 41/67 (61%)
Frame = +2
Query: 5 VKPTTPTGKLPVVEYEGKKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMVDVLEG 184
+KPT P+G++P++ +G + +QS AIAR +ARK+GF+G+ +E + + D +E
Sbjct: 42 LKPTFPSGQVPILCIDGAQFSQSTAIARYLARKFGFVGQTAEEELQADEVVDTFKDFIES 101
Query: 185 MYKIYFA 205
K A
Sbjct: 102 FRKFVIA 108
>sp|P46088|GST_OMMSL Glutathione S-transferase (GST class-sigma)
Length = 203
Score = 52.4 bits (124), Expect = 3e-07
Identities = 24/69 (34%), Positives = 42/69 (60%)
Frame = +2
Query: 2 DVKPTTPTGKLPVVEYEGKKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMVDVLE 181
++K T + +PV++ +G K++QSM IAR +AR++G G+ E Y ++ + D+
Sbjct: 41 NLKATMYSNAMPVLDIDGTKMSQSMCIARHLAREFGLDGKTSLEKYRVDEITETLQDIFN 100
Query: 182 GMYKIYFAP 208
+ KI FAP
Sbjct: 101 DVVKIKFAP 109
>sp|P91252|GST6_CAEEL Probable glutathione S-transferase 6 (GST class-sigma)
Length = 206
Score = 51.2 bits (121), Expect = 7e-07
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +2
Query: 8 KPTTPTGKLPVVEYEGKKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMVDVL 178
K TP G+LP++E +GK L QS AIAR +AR++G G++D E ++ Q D L
Sbjct: 43 KNNTPFGQLPILEVDGKPLGQSYAIARYLAREFGIAGQNDTEAAEVDAIADQFKDYL 99
>sp|Q21355|GST4_CAEEL Glutathione S-transferase 4 (GST class-sigma) (CeGST1)
Length = 207
Score = 50.4 bits (119), Expect = 1e-06
Identities = 22/58 (37%), Positives = 38/58 (65%)
Frame = +2
Query: 5 VKPTTPTGKLPVVEYEGKKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMVDVL 178
+KPTTP G+LP+++ +G++ QSM+I R +ARK+G G+ +E + + Q D +
Sbjct: 42 LKPTTPFGQLPILQVDGEQFGQSMSITRYLARKFGLAGKTAEEEAYADSIVDQYRDFI 99
>sp|P81706|GSTA1_CAVPO Glutathione S-transferase A (GST A) (Class-alpha) (GGST A1-1)
Length = 218
Score = 49.7 bits (117), Expect = 2e-06
Identities = 25/60 (41%), Positives = 35/60 (58%)
Frame = +2
Query: 29 KLPVVEYEGKKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMVDVLEGMYKIYFAP 208
++P+VE +G K+ QS AI IA KY G+D KE LI+ M D+ E +K+ AP
Sbjct: 53 QVPMVEMDGMKMVQSRAILNYIATKYNLYGKDTKERLLIDMYTEGMTDLYELFFKVILAP 112
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,373,007
Number of Sequences: 369166
Number of extensions: 504018
Number of successful extensions: 1583
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1579
length of database: 68,354,980
effective HSP length: 41
effective length of database: 60,780,845
effective search space used: 1701863660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)