Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_J24
(673 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P07229|FRI1_RANCA Ferritin, higher subunit (Ferritin H) 77 5e-14
sp|P49945|FRIL2_MOUSE Ferritin light chain 2 (Ferritin L su... 77 5e-14
sp|P42577|FRIS_LYMST Soma ferritin 76 7e-14
sp|P49948|FRIH2_XENLA Ferritin heavy chain 2 (XL2-17) 76 7e-14
sp|P07798|FRI2_RANCA Ferritin, middle subunit (Ferritin M) ... 76 7e-14
sp|Q7SXA5|FRIL_XENLA Ferritin light chain, oocyte isoform (... 76 9e-14
sp|P02793|FRIL1_RAT Ferritin light chain 1 (Ferritin L subu... 75 2e-13
sp|P17663|FRIH1_XENLA Ferritin heavy chain 1 74 3e-13
sp|P29391|FRIL1_MOUSE Ferritin light chain 1 (Ferritin L su... 74 3e-13
sp|P49947|FRIM_SALSA Ferritin, middle subunit (Ferritin M) 72 1e-12
>sp|P07229|FRI1_RANCA Ferritin, higher subunit (Ferritin H)
Length = 176
Score = 76.6 bits (187), Expect = 5e-14
Identities = 46/145 (31%), Positives = 77/145 (53%)
Frame = +1
Query: 22 EVEAEVSKLINRMLHLCQGYRQIQMRFLTNELNLMSFGRLFELIRQMEVRYTEEFIRFQI 201
+ EA +++++N L+ Y + F +++ L + + F+ E + E+ ++ Q
Sbjct: 12 DCEAAINRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREHAEKLMKDQN 71
Query: 202 SRGQRINWHDIKPVEHIENGKPVEILQTILNLEKDVHQATIKLAKIGIEKNDLVLTAFLE 381
RG RI D+K E E G +E +Q L LEK V+QA + L K+G +K D L FLE
Sbjct: 72 KRGGRIVLQDVKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKVGSDKVDPHLCDFLE 131
Query: 382 DRVILRQVKVIRKRANQLRDLKRSG 456
+ QVK I++ + + +LKR G
Sbjct: 132 TEYLEEQVKSIKQLGDYITNLKRLG 156
>sp|P49945|FRIL2_MOUSE Ferritin light chain 2 (Ferritin L subunit 2) (Ferritin subunit LG)
Length = 183
Score = 76.6 bits (187), Expect = 5e-14
Identities = 45/143 (31%), Positives = 75/143 (52%)
Frame = +1
Query: 22 EVEAEVSKLINRMLHLCQGYRQIQMRFLTNELNLMSFGRLFELIRQMEVRYTEEFIRFQI 201
EVEA V++L+N L Y + F +++ L G F + + + E ++ Q
Sbjct: 12 EVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLKLQN 71
Query: 202 SRGQRINWHDIKPVEHIENGKPVEILQTILNLEKDVHQATIKLAKIGIEKNDLVLTAFLE 381
RG R + D++ E GK +E +Q L LEK+++QA + L +G + D L FLE
Sbjct: 72 ERGGRALFQDVQKPSQDEWGKTLEAIQAALRLEKNLNQALLDLHALGSARTDPHLCDFLE 131
Query: 382 DRVILRQVKVIRKRANQLRDLKR 450
+ ++VK+I+K N L +L+R
Sbjct: 132 SHFLDKEVKLIKKMGNHLTNLRR 154
>sp|P42577|FRIS_LYMST Soma ferritin
Length = 174
Score = 76.3 bits (186), Expect = 7e-14
Identities = 45/152 (29%), Positives = 81/152 (53%)
Frame = +1
Query: 22 EVEAEVSKLINRMLHLCQGYRQIQMRFLTNELNLMSFGRLFELIRQMEVRYTEEFIRFQI 201
E EA +++ IN L+ Y+ + F +++ L F + F+ + E + E+ +++Q
Sbjct: 13 ESEAGINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQN 72
Query: 202 SRGQRINWHDIKPVEHIENGKPVEILQTILNLEKDVHQATIKLAKIGIEKNDLVLTAFLE 381
RG RI DIK + E G +E +Q L LEK V+Q+ + L K+ +D + FLE
Sbjct: 73 KRGGRIVLQDIKKPDRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLE 132
Query: 382 DRVILRQVKVIRKRANQLRDLKRSGDDVTPFL 477
+ QVK I++ ++ + +LKR G + ++
Sbjct: 133 SEFLEEQVKSIKELSDYITNLKRVGPGLGEYI 164
>sp|P49948|FRIH2_XENLA Ferritin heavy chain 2 (XL2-17)
Length = 176
Score = 76.3 bits (186), Expect = 7e-14
Identities = 44/145 (30%), Positives = 76/145 (52%)
Frame = +1
Query: 22 EVEAEVSKLINRMLHLCQGYRQIQMRFLTNELNLMSFGRLFELIRQMEVRYTEEFIRFQI 201
+ EA +++++N ++ Y + F +++ L + F+ E + E+F+++Q
Sbjct: 12 DCEAAINRMVNMEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQN 71
Query: 202 SRGQRINWHDIKPVEHIENGKPVEILQTILNLEKDVHQATIKLAKIGIEKNDLVLTAFLE 381
RG R+ DIK E E G +E Q L LEK V+QA + L K+ +K D L FLE
Sbjct: 72 KRGGRVVLQDIKKPERDEWGNTLEATQAALQLEKTVNQALLDLHKLASDKVDAHLCDFLE 131
Query: 382 DRVILRQVKVIRKRANQLRDLKRSG 456
+ QVK +++ + + +LKR G
Sbjct: 132 SEYLEEQVKAMKQLGDYITNLKRLG 156
>sp|P07798|FRI2_RANCA Ferritin, middle subunit (Ferritin M) (Ferritin X) (Ferritin H')
Length = 176
Score = 76.3 bits (186), Expect = 7e-14
Identities = 47/145 (32%), Positives = 77/145 (53%)
Frame = +1
Query: 22 EVEAEVSKLINRMLHLCQGYRQIQMRFLTNELNLMSFGRLFELIRQMEVRYTEEFIRFQI 201
+ EA V++++N L+ Y + F +++ L + F+ E + E+F+++Q
Sbjct: 12 DCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQN 71
Query: 202 SRGQRINWHDIKPVEHIENGKPVEILQTILNLEKDVHQATIKLAKIGIEKNDLVLTAFLE 381
RG R+ DIK E E G +E +Q L LEK V+QA + L K+ +K D L FLE
Sbjct: 72 KRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLCDFLE 131
Query: 382 DRVILRQVKVIRKRANQLRDLKRSG 456
+ QVK I++ + + +LKR G
Sbjct: 132 SEYLEEQVKDIKRIGDFITNLKRLG 156
>sp|Q7SXA5|FRIL_XENLA Ferritin light chain, oocyte isoform (B-ferritin) (XeBF) (GV-LCH)
Length = 177
Score = 75.9 bits (185), Expect = 9e-14
Identities = 42/143 (29%), Positives = 76/143 (53%)
Frame = +1
Query: 22 EVEAEVSKLINRMLHLCQGYRQIQMRFLTNELNLMSFGRLFELIRQMEVRYTEEFIRFQI 201
E EA V+++ N L Y + F +++ L F + F + + + + E+F++FQ
Sbjct: 14 ESEAGVNRIANLELQASYLYLSVGYYFDRDDVALSKFSKFFRELSEKKRDHAEDFLKFQN 73
Query: 202 SRGQRINWHDIKPVEHIENGKPVEILQTILNLEKDVHQATIKLAKIGIEKNDLVLTAFLE 381
RG R+ D+K + E G + ++ LNLEK ++QA + L KI + D + +LE
Sbjct: 74 KRGGRVVLQDVKKPDDDEWGNGTKAMEVALNLEKSINQAVLDLHKIATDHTDPHMQDYLE 133
Query: 382 DRVILRQVKVIRKRANQLRDLKR 450
+ +VK+I+K + L +L+R
Sbjct: 134 HEFLEEEVKLIKKLGDHLTNLRR 156
>sp|P02793|FRIL1_RAT Ferritin light chain 1 (Ferritin L subunit 1)
Length = 183
Score = 74.7 bits (182), Expect = 2e-13
Identities = 44/143 (30%), Positives = 75/143 (52%)
Frame = +1
Query: 22 EVEAEVSKLINRMLHLCQGYRQIQMRFLTNELNLMSFGRLFELIRQMEVRYTEEFIRFQI 201
EVEA V++L+N L Y + F +++ L G F + + + E ++ Q
Sbjct: 12 EVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLKLQN 71
Query: 202 SRGQRINWHDIKPVEHIENGKPVEILQTILNLEKDVHQATIKLAKIGIEKNDLVLTAFLE 381
RG R + D++ E GK +E ++ L LEK+++QA + L +G + D L FLE
Sbjct: 72 ERGGRALFQDVQKPSQDEWGKTLEAMEAALALEKNLNQALLDLHALGSARTDPHLCDFLE 131
Query: 382 DRVILRQVKVIRKRANQLRDLKR 450
+ ++VK+I+K N L +L+R
Sbjct: 132 SHFLDKEVKLIKKMGNHLTNLRR 154
>sp|P17663|FRIH1_XENLA Ferritin heavy chain 1
Length = 176
Score = 74.3 bits (181), Expect = 3e-13
Identities = 43/145 (29%), Positives = 76/145 (52%)
Frame = +1
Query: 22 EVEAEVSKLINRMLHLCQGYRQIQMRFLTNELNLMSFGRLFELIRQMEVRYTEEFIRFQI 201
+ EA +++++N ++ Y + F +++ L + F+ E + E+F+++Q
Sbjct: 12 DCEAAINRMVNLEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQN 71
Query: 202 SRGQRINWHDIKPVEHIENGKPVEILQTILNLEKDVHQATIKLAKIGIEKNDLVLTAFLE 381
RG R+ DIK E E +E +Q L LEK V+QA + L K+ +K D L FLE
Sbjct: 72 KRGGRVVLQDIKKPERDEWSNTLEAMQAALQLEKTVNQALLDLHKLASDKVDPQLCDFLE 131
Query: 382 DRVILRQVKVIRKRANQLRDLKRSG 456
+ QVK +++ + + +LKR G
Sbjct: 132 SEYLEEQVKAMKELGDYITNLKRLG 156
>sp|P29391|FRIL1_MOUSE Ferritin light chain 1 (Ferritin L subunit 1)
Length = 183
Score = 74.3 bits (181), Expect = 3e-13
Identities = 44/143 (30%), Positives = 74/143 (51%)
Frame = +1
Query: 22 EVEAEVSKLINRMLHLCQGYRQIQMRFLTNELNLMSFGRLFELIRQMEVRYTEEFIRFQI 201
EVEA V++L+N L Y + F +++ L G F + + + E + FQ
Sbjct: 12 EVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLEFQN 71
Query: 202 SRGQRINWHDIKPVEHIENGKPVEILQTILNLEKDVHQATIKLAKIGIEKNDLVLTAFLE 381
RG R + D++ E GK E ++ L +EK+++QA + L +G + D L FLE
Sbjct: 72 DRGGRALFQDVQKPSQDEWGKTQEAMEAALAMEKNLNQALLDLHALGSARTDPHLCDFLE 131
Query: 382 DRVILRQVKVIRKRANQLRDLKR 450
+ ++VK+I+K N L +L+R
Sbjct: 132 SHYLDKEVKLIKKMGNHLTNLRR 154
>sp|P49947|FRIM_SALSA Ferritin, middle subunit (Ferritin M)
Length = 176
Score = 72.4 bits (176), Expect = 1e-12
Identities = 44/143 (30%), Positives = 73/143 (51%)
Frame = +1
Query: 22 EVEAEVSKLINRMLHLCQGYRQIQMRFLTNELNLMSFGRLFELIRQMEVRYTEEFIRFQI 201
+ E ++++IN + Y + F +++ L F F+ + E + ++ + FQ
Sbjct: 12 DCERAINRMINMEMFASYTYTSMAFYFSRDDVALPGFAHFFKENSEEEREHADKLLSFQN 71
Query: 202 SRGQRINWHDIKPVEHIENGKPVEILQTILNLEKDVHQATIKLAKIGIEKNDLVLTAFLE 381
RG RI DIK E E G +E +Q L LEK+V+QA + L KI +K D L FLE
Sbjct: 72 KRGGRILLQDIKKPERDEWGNGLEAMQCALQLEKNVNQALLDLHKIASDKVDPHLCDFLE 131
Query: 382 DRVILRQVKVIRKRANQLRDLKR 450
+ QV+ I+K + + +L +
Sbjct: 132 THYLNEQVEAIKKLGDHITNLTK 154
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,296,496
Number of Sequences: 369166
Number of extensions: 1193896
Number of successful extensions: 3612
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3612
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 5636246860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)