Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_J11
(788 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P29845|HSP7E_DROME Heat shock 70 kDa protein cognate 5 400 e-111
sp|P38647|GRP75_MOUSE Stress-70 protein, mitochondrial prec... 399 e-111
sp|O35501|GRP75_CRIGR Stress-70 protein, mitochondrial prec... 398 e-111
sp|P38646|GRP75_HUMAN Stress-70 protein, mitochondrial prec... 398 e-110
sp|P48721|GRP75_RAT Stress-70 protein, mitochondrial precur... 397 e-110
sp|P11141|HSP7F_CAEEL Heat shock 70 kDa protein F, mitochon... 396 e-110
sp|P42374|DNAK_RHIME Chaperone protein dnaK (Heat shock pro... 359 5e-99
sp|Q8YE76|DNAK_BRUME Chaperone protein dnaK (Heat shock pro... 358 7e-99
sp|Q8FXX2|DNAK_BRUSU Chaperone protein dnaK (Heat shock pro... 357 2e-98
sp|Q98DD1|DNAK_RHILO Chaperone protein dnaK (Heat shock pro... 357 2e-98
>sp|P29845|HSP7E_DROME Heat shock 70 kDa protein cognate 5
Length = 686
Score = 400 bits (1029), Expect = e-111
Identities = 202/241 (83%), Positives = 226/241 (93%)
Frame = +3
Query: 3 GPKHLSLKLTRSKLEQLVEHLIKRTIEPCEKAIKDAEVKTSDIREVLLVGGMTRMPRVQE 182
GP+H++LKLTRSKLE LV LIKRTI+PC+KA+ DAEV S+I EVLLVGGMTRMP+VQ
Sbjct: 338 GPQHMNLKLTRSKLESLVGDLIKRTIQPCQKALSDAEVSKSEIGEVLLVGGMTRMPKVQS 397
Query: 183 TVQKLFGRVPSKSVNPDEAVAMGAAIQGGVLAGDVTNVLLLDVTPLSLGIETLGGVFTKL 362
TVQ+LFGR PS+SVNPDEAVA+GAA+QGGVLAGDVT+VLLLDVTPLSLGIETLGGVFT+L
Sbjct: 398 TVQELFGRQPSRSVNPDEAVAVGAAVQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRL 457
Query: 363 INRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMAADNKILGQFSLIGIPPAPRGVPQ 542
I+RNTTIPTKKSQVFSTA+DGQTQVEIKVHQGEREMA DNK+LG F+L+GIPPAPRGVPQ
Sbjct: 458 ISRNTTIPTKKSQVFSTASDGQTQVEIKVHQGEREMANDNKLLGSFTLVGIPPAPRGVPQ 517
Query: 543 IEVTFDIDANGIVNVSARDKGTGKEQQIVIQSSGGLSKDEIENMIKRAEENAENDKRKRE 722
IEV FDIDANGIV+VSA+DKGTGKEQQIVIQSSGGLSKDEIENMIK+AEE A DK+KRE
Sbjct: 518 IEVVFDIDANGIVHVSAKDKGTGKEQQIVIQSSGGLSKDEIENMIKKAEEYATADKQKRE 577
Query: 723 M 725
+
Sbjct: 578 L 578
Score = 32.3 bits (72), Expect = 1.5
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +1
Query: 715 REKWVEVVNQAEGIVYDTESKIDE 786
+ + +E+VNQ E IV+DTE+K++E
Sbjct: 575 KRELIEIVNQGESIVHDTETKMEE 598
>sp|P38647|GRP75_MOUSE Stress-70 protein, mitochondrial precursor (75 kDa glucose regulated
protein) (GRP 75) (Peptide-binding protein 74) (PBP74)
(P66 MOT) (Mortalin)
Length = 679
Score = 399 bits (1025), Expect = e-111
Identities = 201/240 (83%), Positives = 225/240 (93%)
Frame = +3
Query: 3 GPKHLSLKLTRSKLEQLVEHLIKRTIEPCEKAIKDAEVKTSDIREVLLVGGMTRMPRVQE 182
GPKHL++KLTR++ E +V LIKRTI PC+KA++DAEV SDI EV+LVGGMTRMP+VQ+
Sbjct: 338 GPKHLNMKLTRAQFEGIVTDLIKRTIAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQ 397
Query: 183 TVQKLFGRVPSKSVNPDEAVAMGAAIQGGVLAGDVTNVLLLDVTPLSLGIETLGGVFTKL 362
TVQ LFGR PSK+VNPDEAVA+GAAIQGGVLAGDVT+VLLLDVTPLSLGIETLGGVFTKL
Sbjct: 398 TVQDLFGRAPSKAVNPDEAVAIGAAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTKL 457
Query: 363 INRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMAADNKILGQFSLIGIPPAPRGVPQ 542
INRNTTIPTKKSQVFSTAADGQTQVEIKV QGEREMA DNK+LGQF+LIGIPPAPRGVPQ
Sbjct: 458 INRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQ 517
Query: 543 IEVTFDIDANGIVNVSARDKGTGKEQQIVIQSSGGLSKDEIENMIKRAEENAENDKRKRE 722
IEVTFDIDANGIV+VSA+DKGTG+EQQIVIQSSGGLSKD+IENM+K AE+ AE D+RK+E
Sbjct: 518 IEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIENMVKNAEKYAEEDRRKKE 577
Score = 33.1 bits (74), Expect = 0.89
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +1
Query: 715 REKWVEVVNQAEGIVYDTESKIDE 786
+++ VE VN AEGI++DTE+K++E
Sbjct: 575 KKERVEAVNMAEGIIHDTETKMEE 598
>sp|O35501|GRP75_CRIGR Stress-70 protein, mitochondrial precursor (75 kDa glucose regulated
protein) (GRP 75)
Length = 679
Score = 398 bits (1023), Expect = e-111
Identities = 200/240 (83%), Positives = 225/240 (93%)
Frame = +3
Query: 3 GPKHLSLKLTRSKLEQLVEHLIKRTIEPCEKAIKDAEVKTSDIREVLLVGGMTRMPRVQE 182
GPKHL++KLTR++ E +V LIKRTI PC+KA++DAEV SDI EV+LVGGMTRMP+VQ+
Sbjct: 338 GPKHLNMKLTRAQFEGIVTDLIKRTIAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQ 397
Query: 183 TVQKLFGRVPSKSVNPDEAVAMGAAIQGGVLAGDVTNVLLLDVTPLSLGIETLGGVFTKL 362
TVQ LFGR PSK+VNPDEAVA+GAAIQGGVLAGDVT+VLLLDVTPLSLGIETLGGVFTKL
Sbjct: 398 TVQDLFGRAPSKAVNPDEAVAIGAAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTKL 457
Query: 363 INRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMAADNKILGQFSLIGIPPAPRGVPQ 542
INRNTTIPTKKSQVFSTAADGQTQVEIKV QGEREMA DNK+LGQF+LIGIPPAPRGVPQ
Sbjct: 458 INRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQ 517
Query: 543 IEVTFDIDANGIVNVSARDKGTGKEQQIVIQSSGGLSKDEIENMIKRAEENAENDKRKRE 722
IEVTFD+DANGIV+VSA+DKGTG+EQQIVIQSSGGLSKD+IENM+K AE+ AE D+RK+E
Sbjct: 518 IEVTFDLDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIENMVKNAEKYAEEDRRKKE 577
Score = 33.1 bits (74), Expect = 0.89
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +1
Query: 715 REKWVEVVNQAEGIVYDTESKIDE 786
+++ VE VN AEGI++DTE+K++E
Sbjct: 575 KKERVEAVNMAEGIIHDTETKMEE 598
>sp|P38646|GRP75_HUMAN Stress-70 protein, mitochondrial precursor (75 kDa glucose regulated
protein) (GRP 75) (Peptide-binding protein 74) (PBP74)
(Mortalin) (MOT)
Length = 679
Score = 398 bits (1022), Expect = e-110
Identities = 200/240 (83%), Positives = 225/240 (93%)
Frame = +3
Query: 3 GPKHLSLKLTRSKLEQLVEHLIKRTIEPCEKAIKDAEVKTSDIREVLLVGGMTRMPRVQE 182
GPKHL++KLTR++ E +V LI+RTI PC+KA++DAEV SDI EV+LVGGMTRMP+VQ+
Sbjct: 338 GPKHLNMKLTRAQFEGIVTDLIRRTIAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQ 397
Query: 183 TVQKLFGRVPSKSVNPDEAVAMGAAIQGGVLAGDVTNVLLLDVTPLSLGIETLGGVFTKL 362
TVQ LFGR PSK+VNPDEAVA+GAAIQGGVLAGDVT+VLLLDVTPLSLGIETLGGVFTKL
Sbjct: 398 TVQDLFGRAPSKAVNPDEAVAIGAAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTKL 457
Query: 363 INRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMAADNKILGQFSLIGIPPAPRGVPQ 542
INRNTTIPTKKSQVFSTAADGQTQVEIKV QGEREMA DNK+LGQF+LIGIPPAPRGVPQ
Sbjct: 458 INRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQ 517
Query: 543 IEVTFDIDANGIVNVSARDKGTGKEQQIVIQSSGGLSKDEIENMIKRAEENAENDKRKRE 722
IEVTFDIDANGIV+VSA+DKGTG+EQQIVIQSSGGLSKD+IENM+K AE+ AE D+RK+E
Sbjct: 518 IEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIENMVKNAEKYAEEDRRKKE 577
Score = 33.1 bits (74), Expect = 0.89
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +1
Query: 715 REKWVEVVNQAEGIVYDTESKIDE 786
+++ VE VN AEGI++DTE+K++E
Sbjct: 575 KKERVEAVNMAEGIIHDTETKMEE 598
>sp|P48721|GRP75_RAT Stress-70 protein, mitochondrial precursor (75 kDa glucose regulated
protein) (GRP 75) (Peptide-binding protein 74) (PBP74)
(MTHSP70) (Mortalin)
Length = 679
Score = 397 bits (1020), Expect = e-110
Identities = 200/240 (83%), Positives = 224/240 (93%)
Frame = +3
Query: 3 GPKHLSLKLTRSKLEQLVEHLIKRTIEPCEKAIKDAEVKTSDIREVLLVGGMTRMPRVQE 182
GPKHL++KLTR++ E +V LIKRTI PC+KA++D EV SDI EV+LVGGMTRMP+VQ+
Sbjct: 338 GPKHLNMKLTRAQFEGIVTDLIKRTIAPCQKAMQDREVSKSDIGEVILVGGMTRMPKVQQ 397
Query: 183 TVQKLFGRVPSKSVNPDEAVAMGAAIQGGVLAGDVTNVLLLDVTPLSLGIETLGGVFTKL 362
TVQ LFGR PSK+VNPDEAVA+GAAIQGGVLAGDVT+VLLLDVTPLSLGIETLGGVFTKL
Sbjct: 398 TVQDLFGRAPSKAVNPDEAVAIGAAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTKL 457
Query: 363 INRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMAADNKILGQFSLIGIPPAPRGVPQ 542
INRNTTIPTKKSQVFSTAADGQTQVEIKV QGEREMA DNK+LGQF+LIGIPPAPRGVPQ
Sbjct: 458 INRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQ 517
Query: 543 IEVTFDIDANGIVNVSARDKGTGKEQQIVIQSSGGLSKDEIENMIKRAEENAENDKRKRE 722
IEVTFDIDANGIV+VSA+DKGTG+EQQIVIQSSGGLSKD+IENM+K AE+ AE D+RK+E
Sbjct: 518 IEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIENMVKNAEKYAEEDRRKKE 577
Score = 33.5 bits (75), Expect = 0.68
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +1
Query: 715 REKWVEVVNQAEGIVYDTESKIDE 786
+++ VE VN AEGIV+DTE+K++E
Sbjct: 575 KKERVEAVNMAEGIVHDTETKMEE 598
>sp|P11141|HSP7F_CAEEL Heat shock 70 kDa protein F, mitochondrial precursor
Length = 657
Score = 396 bits (1018), Expect = e-110
Identities = 198/241 (82%), Positives = 223/241 (92%)
Frame = +3
Query: 3 GPKHLSLKLTRSKLEQLVEHLIKRTIEPCEKAIKDAEVKTSDIREVLLVGGMTRMPRVQE 182
GPKHL+LKLTR+K EQ+V LIKRTIEPC KA+ DAEVK+S I +VLLVGGM+RMP+VQ
Sbjct: 317 GPKHLNLKLTRAKFEQIVGDLIKRTIEPCRKALHDAEVKSSQIADVLLVGGMSRMPKVQA 376
Query: 183 TVQKLFGRVPSKSVNPDEAVAMGAAIQGGVLAGDVTNVLLLDVTPLSLGIETLGGVFTKL 362
TVQ++FG+VPSK+VNPDEAVAMGAAIQG VLAGDVT+VLLLDVTPLSLGIETLGG+ TKL
Sbjct: 377 TVQEIFGKVPSKAVNPDEAVAMGAAIQGAVLAGDVTDVLLLDVTPLSLGIETLGGIMTKL 436
Query: 363 INRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMAADNKILGQFSLIGIPPAPRGVPQ 542
I RNTTIPTKKSQVFSTAADGQTQV+IKV QGEREMA NK+LGQFSL+GIPPAPRGVPQ
Sbjct: 437 ITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVPQ 496
Query: 543 IEVTFDIDANGIVNVSARDKGTGKEQQIVIQSSGGLSKDEIENMIKRAEENAENDKRKRE 722
+EVTFDIDANGIVNVSARD+GTGKEQQIVIQSSGGLSKD+IENMIK AE+NA D +++E
Sbjct: 497 VEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLSKDQIENMIKEAEKNAAEDAKRKE 556
Query: 723 M 725
+
Sbjct: 557 L 557
Score = 36.6 bits (83), Expect = 0.081
Identities = 15/24 (62%), Positives = 22/24 (91%)
Frame = +1
Query: 715 REKWVEVVNQAEGIVYDTESKIDE 786
R++ VEV+NQAEGI++DTE+K+ E
Sbjct: 554 RKELVEVINQAEGIIHDTEAKMTE 577
>sp|P42374|DNAK_RHIME Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa
protein) (HSP70)
Length = 641
Score = 359 bits (921), Expect = 5e-99
Identities = 182/240 (75%), Positives = 208/240 (86%)
Frame = +3
Query: 3 GPKHLSLKLTRSKLEQLVEHLIKRTIEPCEKAIKDAEVKTSDIREVLLVGGMTRMPRVQE 182
GPKHL++KL+R+K E LVE LI++TI PC+ A+KDA V ++I EV+LVGGMTRMP+VQE
Sbjct: 287 GPKHLTMKLSRAKFESLVEDLIQKTIAPCKAALKDAGVSAAEIDEVVLVGGMTRMPKVQE 346
Query: 183 TVQKLFGRVPSKSVNPDEAVAMGAAIQGGVLAGDVTNVLLLDVTPLSLGIETLGGVFTKL 362
TV++LFG+ P K VNPDE VAMGAAIQ GVL GDV +VLLLDVTPLSLGIETLGGVFT+L
Sbjct: 347 TVKQLFGKEPHKGVNPDEVVAMGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRL 406
Query: 363 INRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMAADNKILGQFSLIGIPPAPRGVPQ 542
I RNTTIPTKKSQVFSTA D Q+ V I+V QGEREMAADNK+LGQF L+GIPPAPRGVPQ
Sbjct: 407 IERNTTIPTKKSQVFSTADDNQSAVTIRVSQGEREMAADNKLLGQFDLVGIPPAPRGVPQ 466
Query: 543 IEVTFDIDANGIVNVSARDKGTGKEQQIVIQSSGGLSKDEIENMIKRAEENAENDKRKRE 722
IEVTFDIDANGIV VSA+DKGTGKE QI IQ+SGGLS EIE M+K AE NAE DK++RE
Sbjct: 467 IEVTFDIDANGIVQVSAKDKGTGKEHQIRIQASGGLSDAEIEKMVKDAEANAEADKKRRE 526
>sp|Q8YE76|DNAK_BRUME Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa
protein) (HSP70)
Length = 637
Score = 358 bits (920), Expect = 7e-99
Identities = 178/240 (74%), Positives = 207/240 (86%)
Frame = +3
Query: 3 GPKHLSLKLTRSKLEQLVEHLIKRTIEPCEKAIKDAEVKTSDIREVLLVGGMTRMPRVQE 182
GPKHL++KL+R+K E LV+ L++RT+EPC+ A+KDA +K +I EV+LVGGMTRMP++QE
Sbjct: 287 GPKHLAIKLSRAKFESLVDDLVQRTVEPCKAALKDAGLKAGEIDEVVLVGGMTRMPKIQE 346
Query: 183 TVQKLFGRVPSKSVNPDEAVAMGAAIQGGVLAGDVTNVLLLDVTPLSLGIETLGGVFTKL 362
V+ FG+ P K VNPDE VAMGAAIQGGVL GDV +VLLLDVTPLSLGIETLGGVFT+L
Sbjct: 347 VVKAFFGKEPHKGVNPDEVVAMGAAIQGGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRL 406
Query: 363 INRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMAADNKILGQFSLIGIPPAPRGVPQ 542
I RNTTIPTKKSQ FSTA D Q+ V I+V QGEREMAADNK+LGQF L+GIPPAPRGVPQ
Sbjct: 407 IERNTTIPTKKSQTFSTAEDNQSAVTIRVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQ 466
Query: 543 IEVTFDIDANGIVNVSARDKGTGKEQQIVIQSSGGLSKDEIENMIKRAEENAENDKRKRE 722
IEVTFDIDANGIVNVSA+DKGTGKE QI IQ+SGGLS +IE M+K AE NAE DK++RE
Sbjct: 467 IEVTFDIDANGIVNVSAKDKGTGKEHQIRIQASGGLSDADIEKMVKDAEANAEADKKRRE 526
>sp|Q8FXX2|DNAK_BRUSU Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa
protein) (HSP70)
Length = 637
Score = 357 bits (917), Expect = 2e-98
Identities = 177/240 (73%), Positives = 207/240 (86%)
Frame = +3
Query: 3 GPKHLSLKLTRSKLEQLVEHLIKRTIEPCEKAIKDAEVKTSDIREVLLVGGMTRMPRVQE 182
GPKHL++KL+R+K E LV+ L++RT+EPC+ A+KDA +K +I EV+LVGGMTRMP++QE
Sbjct: 287 GPKHLAIKLSRAKFESLVDDLVQRTVEPCKAALKDAGLKAGEIDEVVLVGGMTRMPKIQE 346
Query: 183 TVQKLFGRVPSKSVNPDEAVAMGAAIQGGVLAGDVTNVLLLDVTPLSLGIETLGGVFTKL 362
V+ FG+ P K VNPDE VAMGAAIQGGVL GDV +VLLLDVTPLSLGIETLGGVFT+L
Sbjct: 347 VVKAFFGKEPHKGVNPDEVVAMGAAIQGGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRL 406
Query: 363 INRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMAADNKILGQFSLIGIPPAPRGVPQ 542
I RNTTIPTKKSQ FSTA D Q+ V I+V QGEREMAADNK+LGQF L+GIPPAPRGVPQ
Sbjct: 407 IERNTTIPTKKSQTFSTAEDNQSAVTIRVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQ 466
Query: 543 IEVTFDIDANGIVNVSARDKGTGKEQQIVIQSSGGLSKDEIENMIKRAEENAENDKRKRE 722
IEVTFDIDANGIVNVSA+DKGTGKE QI IQ+SGGL+ +IE M+K AE NAE DK++RE
Sbjct: 467 IEVTFDIDANGIVNVSAKDKGTGKEHQIRIQASGGLTDADIEKMVKDAEANAEADKKRRE 526
>sp|Q98DD1|DNAK_RHILO Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa
protein) (HSP70)
Length = 638
Score = 357 bits (917), Expect = 2e-98
Identities = 179/239 (74%), Positives = 206/239 (86%)
Frame = +3
Query: 3 GPKHLSLKLTRSKLEQLVEHLIKRTIEPCEKAIKDAEVKTSDIREVLLVGGMTRMPRVQE 182
GPKHL+LKLTR+K E LVE L++RTI+PC+ A+KDA +K +I EV+LVGGMTRMP++QE
Sbjct: 287 GPKHLTLKLTRAKFESLVEDLVQRTIDPCKAALKDAGLKAGEIDEVVLVGGMTRMPKIQE 346
Query: 183 TVQKLFGRVPSKSVNPDEAVAMGAAIQGGVLAGDVTNVLLLDVTPLSLGIETLGGVFTKL 362
V++ FG+ P K VNPDE VA+GAAIQ GVL GDV +VLLLDVTPLSLGIETLGGVFT+L
Sbjct: 347 IVKQFFGKEPHKGVNPDEVVALGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRL 406
Query: 363 INRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMAADNKILGQFSLIGIPPAPRGVPQ 542
I RNTTIPTKKSQVFSTA D Q+ V I+V QGEREMAADNK LGQF L+GIPPAPRGVPQ
Sbjct: 407 IERNTTIPTKKSQVFSTAEDSQSAVTIRVFQGEREMAADNKALGQFDLVGIPPAPRGVPQ 466
Query: 543 IEVTFDIDANGIVNVSARDKGTGKEQQIVIQSSGGLSKDEIENMIKRAEENAENDKRKR 719
IEVTFDIDANGIVNVSA+DKGTGKE QI IQ+SGGLS +IE M+K AE NAE DK++R
Sbjct: 467 IEVTFDIDANGIVNVSAKDKGTGKEHQIRIQASGGLSDADIEKMVKDAEANAETDKKRR 525
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,211,722
Number of Sequences: 369166
Number of extensions: 1380384
Number of successful extensions: 5642
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5178
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7454154400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)