Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_I17
(888 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P17126|ACT_HYDAT Actin, non-muscle 6.2 551 e-157
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 551 e-157
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 550 e-156
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 549 e-156
sp|P41113|ACT3_PODCA Actin-3 548 e-156
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 548 e-156
sp|Q26065|ACT_PLAMG Actin, adductor muscle 547 e-155
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 547 e-155
sp|P53458|ACT5_DIPDE Actin-5 547 e-155
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 546 e-155
>sp|P17126|ACT_HYDAT Actin, non-muscle 6.2
Length = 376
Score = 551 bits (1420), Expect = e-157
Identities = 271/295 (91%), Positives = 277/295 (93%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 77
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAI
Sbjct: 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 137
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTER 197
Query: 542 GYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFR 721
GYSFTTTAEREIVRDIKEKLSYVAL F++EM TA PDGQVITIGNERFR
Sbjct: 198 GYSFTTTAEREIVRDIKEKLSYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFR 257
Query: 722 CPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISD 886
CPETLFQPSFIG+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMFPGI+D
Sbjct: 258 CPETLFQPSFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIAD 312
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 551 bits (1420), Expect = e-157
Identities = 270/295 (91%), Positives = 276/295 (93%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 77
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAI
Sbjct: 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 197
Query: 542 GYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFR 721
GYSFTTTAEREIVRDIKEKL YVAL F++EMHTA PDGQVITIGNERFR
Sbjct: 198 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAATSSSLEKSYELPDGQVITIGNERFR 257
Query: 722 CPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISD 886
CPE +FQPSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMFPGI+D
Sbjct: 258 CPEAVFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIAD 312
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 550 bits (1416), Expect = e-156
Identities = 270/295 (91%), Positives = 275/295 (93%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 77
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAI
Sbjct: 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 197
Query: 542 GYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFR 721
GYSFTTTAEREIVRDIKEKL YVAL F++EM TA PDGQVITIGNERFR
Sbjct: 198 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDGQVITIGNERFR 257
Query: 722 CPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISD 886
CPE LFQPSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMFPGI+D
Sbjct: 258 CPEALFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIAD 312
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 549 bits (1414), Expect = e-156
Identities = 269/295 (91%), Positives = 275/295 (93%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 77
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAI
Sbjct: 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 197
Query: 542 GYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFR 721
GYSFTTTAEREIVRDIKEKL YVAL F++EM TA PDGQVITIGNERFR
Sbjct: 198 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFR 257
Query: 722 CPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISD 886
CPE +FQPSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMFPGI+D
Sbjct: 258 CPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIAD 312
>sp|P41113|ACT3_PODCA Actin-3
Length = 376
Score = 548 bits (1412), Expect = e-156
Identities = 268/295 (90%), Positives = 277/295 (93%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 77
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAI
Sbjct: 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 137
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYMMKILTER 197
Query: 542 GYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFR 721
GYSFTTTAEREIVRDIKEKL+YVAL F++EM TA PDGQVITIGNERFR
Sbjct: 198 GYSFTTTAEREIVRDIKEKLAYVALDFEQEMQTAVTSSSLEKSYELPDGQVITIGNERFR 257
Query: 722 CPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISD 886
CPETLFQP+FIG+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMFPGI+D
Sbjct: 258 CPETLFQPAFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIAD 312
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 548 bits (1412), Expect = e-156
Identities = 268/295 (90%), Positives = 275/295 (93%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 77
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAI
Sbjct: 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 197
Query: 542 GYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFR 721
GYSFTTTAEREIVRDIKEKL YVAL F++EM TA PDGQVITIGNERFR
Sbjct: 198 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFR 257
Query: 722 CPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISD 886
CPE +FQPSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMFPGI+D
Sbjct: 258 CPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIAD 312
>sp|Q26065|ACT_PLAMG Actin, adductor muscle
Length = 376
Score = 547 bits (1410), Expect = e-155
Identities = 269/295 (91%), Positives = 275/295 (93%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 77
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAI
Sbjct: 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAI 137
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 542 GYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFR 721
GYSFTTTAEREIVRDIKEKL YVAL F+ EM TA PDGQVITIGNERFR
Sbjct: 198 GYSFTTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFR 257
Query: 722 CPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISD 886
CPE+LFQPSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMFPGI+D
Sbjct: 258 CPESLFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIAD 312
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 547 bits (1409), Expect = e-155
Identities = 268/295 (90%), Positives = 274/295 (92%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 77
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAI
Sbjct: 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 197
Query: 542 GYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFR 721
GYSFTTTAEREIVRDIKEKL YVAL F++EM TA PDGQVITIGNERFR
Sbjct: 198 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFR 257
Query: 722 CPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISD 886
CPE FQPSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMFPGI+D
Sbjct: 258 CPEATFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIAD 312
>sp|P53458|ACT5_DIPDE Actin-5
Length = 371
Score = 547 bits (1409), Expect = e-155
Identities = 269/295 (91%), Positives = 274/295 (92%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 13 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 72
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAI
Sbjct: 73 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 132
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTER
Sbjct: 133 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 192
Query: 542 GYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFR 721
GYSFTTTAEREIVRDIKEKL YVAL F++EM A PDGQVITIGNERFR
Sbjct: 193 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMSNAASSSALEKSYELPDGQVITIGNERFR 252
Query: 722 CPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISD 886
CPE LFQPSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGISD
Sbjct: 253 CPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGISD 307
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 546 bits (1408), Expect = e-155
Identities = 267/295 (90%), Positives = 275/295 (93%)
Frame = +2
Query: 2 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 181
CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV
Sbjct: 18 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 77
Query: 182 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAI 361
TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAI
Sbjct: 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
Query: 362 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLTDYLMKILTER 541
QAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI RLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 197
Query: 542 GYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQVITIGNERFR 721
GYSFTTTAEREIVRDIKEKL YVAL F++EM TA PDGQVITIGNERFR
Sbjct: 198 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFR 257
Query: 722 CPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMFPGISD 886
CPE ++QPSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMFPGI+D
Sbjct: 258 CPEAMYQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIAD 312
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,070,661
Number of Sequences: 369166
Number of extensions: 2023566
Number of successful extensions: 5669
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5508
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8886314050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)