Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_H15
(218 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q20459|NAS25_CAEEL Zinc metalloproteinase nas-25 precurs... 34 0.091
sp|Q20942|NAS38_CAEEL Zinc metalloproteinase nas-38 precurs... 32 0.59
sp|P55112|NAS4_CAEEL Zinc metalloproteinase nas-4 precursor... 30 1.3
sp|P98068|SPAN_STRPU SPAN protein precursor 30 1.3
sp|Q16819|MEP1A_HUMAN Meprin A alpha-subunit precursor (End... 30 2.2
sp|Q19269|NAS14_CAEEL Zinc metalloproteinase nas-14 precurs... 30 2.2
sp|P91828|NAS5_CAEEL Zinc metalloproteinase nas-5 precursor... 30 2.2
sp|P42674|BP10_PARLI Blastula protease 10 precursor 29 3.8
sp|P42662|ASTL_COTJA Astacin-like metalloendopeptidase 28 5.0
sp|Q20781|CAH1_CAEEL Putative carbonic anhydrase-like prote... 28 6.5
>sp|Q20459|NAS25_CAEEL Zinc metalloproteinase nas-25 precursor (Nematode astacin 25)
Length = 399
Score = 34.3 bits (77), Expect = 0.091
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 32 PYETHSVMHYPSYGFACVPGEKVVFKRDGGLIDY--NHVTSRNDLDMVRRFYQC 187
PY+ SVMHY + F+ E+ + +D I+ + + + D D + ++YQC
Sbjct: 183 PYDYGSVMHYSADSFSNKDDEQTMLPKDRSFIETMGSMIPNFYDFDQINQYYQC 236
>sp|Q20942|NAS38_CAEEL Zinc metalloproteinase nas-38 precursor (Nematode astacin 38)
Length = 745
Score = 31.6 bits (70), Expect = 0.59
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 32 PYETHSVMHYPSYGFACVP 88
PY+T SVMHY YGFA P
Sbjct: 257 PYDTGSVMHYGPYGFASDP 275
>sp|P55112|NAS4_CAEEL Zinc metalloproteinase nas-4 precursor (Nematode astacin 4)
Length = 315
Score = 30.4 bits (67), Expect = 1.3
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 23 VDGPYETHSVMHYPSYGFACVPGEKVVFKRDGGLIDYNHVTSRNDLDM--VRRFYQC 187
+D PY+ S+MHY Y F+ G+K + + G +D+D+ + + Y C
Sbjct: 234 LDEPYDYASIMHYGPYAFS-GSGKKTLVPKKSGSERMGQRVKFSDIDVRKINKLYNC 289
>sp|P98068|SPAN_STRPU SPAN protein precursor
Length = 616
Score = 30.4 bits (67), Expect = 1.3
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 35 YETHSVMHYPSYGFAC--VPGEKVVFKRDGGLIDYNHVTSRNDLDMVRRFYQC 187
Y+ S+MHY YGF+ P + R + S D+++ R Y+C
Sbjct: 241 YDVGSIMHYGGYGFSSNGRPTITTIDPRLNSRLGQRTALSAADIELANRIYEC 293
>sp|Q16819|MEP1A_HUMAN Meprin A alpha-subunit precursor (Endopeptidase-2)
(N-benzoyl-L-tyrosyl-P-amino-benzoic acid hydrolase
alpha subunit) (PABA peptide hydrolase) (PPH alpha)
Length = 746
Score = 29.6 bits (65), Expect = 2.2
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +2
Query: 20 EVDGPYETHSVMHYPSYGF---ACVPGEKVVFKRDGGLIDYNHVTSRNDLDMVRRFYQC 187
+++ PY+ S+MHY + F A VP +I S DL+ + R Y C
Sbjct: 201 DLNTPYDYESLMHYQPFSFNKNASVPTITAKIPEFNSIIGQRLDFSAIDLERLNRMYNC 259
>sp|Q19269|NAS14_CAEEL Zinc metalloproteinase nas-14 precursor (Nematode astacin 14)
Length = 503
Score = 29.6 bits (65), Expect = 2.2
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +2
Query: 32 PYETHSVMHYPSYGFACVPGEKVVFKRDGGLIDYNHVTSRNDLDMVRRFYQC 187
PY+ SVMHY F+ ++ K + + + S D V + YQC
Sbjct: 260 PYDYESVMHYHKLAFSRNGKPTIIPKDNEADVGQRYKLSEMDSKKVNKLYQC 311
>sp|P91828|NAS5_CAEEL Zinc metalloproteinase nas-5 precursor (Nematode astacin 5)
Length = 360
Score = 29.6 bits (65), Expect = 2.2
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +2
Query: 32 PYETHSVMHYPSYGFACVPGEKVVFKRDG---GLIDYNHVTSRNDLDMVRRFYQC 187
PY+ +SVMHY FA PG+ + +D +I + S ND V Y C
Sbjct: 215 PYDYNSVMHYDENAFA-KPGKISMMTKDSKFQKVIGHPKDASSNDYKKVCAIYHC 268
>sp|P42674|BP10_PARLI Blastula protease 10 precursor
Length = 597
Score = 28.9 bits (63), Expect = 3.8
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +2
Query: 35 YETHSVMHYPSYGFACVPGEKVVFKRDGGL---IDYNHVTSRNDLDMVRRFYQC 187
Y+ S+MHY YGF+ G + RD L + S D+++ Y+C
Sbjct: 241 YDVGSIMHYGGYGFSS-NGRPTITTRDPRLNSRLGQRIALSPADIELANLIYEC 293
>sp|P42662|ASTL_COTJA Astacin-like metalloendopeptidase
Length = 310
Score = 28.5 bits (62), Expect = 5.0
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +2
Query: 32 PYETHSVMHYPSYGFACVPGEKVVFKRDGGLIDYNHVTSRNDLDM--VRRFYQC 187
PY+ SVMHY + F G+ + G + ++LD+ + + Y C
Sbjct: 132 PYDYSSVMHYGPHTFTNTTGKATIVPVPDGSVHIGQRLGLSNLDVAKINKLYNC 185
>sp|Q20781|CAH1_CAEEL Putative carbonic anhydrase-like protein 1 precursor
Length = 365
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 115 ISFENNFFSGNTSESVTWIVHNTVCFIRSIYF 20
I++E + S E+VTWI+ N FI+ +F
Sbjct: 288 ITYEGSLTSPGCHETVTWIILNQPIFIKKEHF 319
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,130,740
Number of Sequences: 369166
Number of extensions: 495325
Number of successful extensions: 1099
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 68,354,980
effective HSP length: 44
effective length of database: 60,226,640
effective search space used: 1686345920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)