Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_F20
(714 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9EQ61|PESC_MOUSE Pescadillo homolog 1 96 9e-20
sp|P79741|PESC_BRARE Pescadillo 93 6e-19
sp|O00541|PESC_HUMAN Pescadillo homolog 1 92 2e-18
sp|O60164|PESC_SCHPO Pescadillo homolog 63 7e-10
sp|P53261|PESC_YEAST Pescadillo homolog (Nucleolar protein 7) 55 1e-07
sp|O83949|HTPG_TREPA Chaperone protein htpG (Heat shock pro... 34 0.34
sp|P61188|HTPG_TREDE Chaperone protein htpG (Heat shock pro... 33 0.58
sp|Q72PB6|LNT1_LEPIC Apolipoprotein N-acyltransferase 1 (AL... 32 1.7
sp|Q8F724|LNT1_LEPIN Apolipoprotein N-acyltransferase 1 (AL... 32 1.7
sp|Q7VFD7|HTPG_HELHP Chaperone protein htpG (Heat shock pro... 31 2.9
>sp|Q9EQ61|PESC_MOUSE Pescadillo homolog 1
Length = 584
Score = 95.9 bits (237), Expect = 9e-20
Identities = 47/100 (47%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Frame = +1
Query: 7 FVLRCCGATEVSWDSSVASGATFDENDAGIEYHVVDRTNLGAEARSASRVSRFYVQPQFV 186
F++R G +VSWD S+ GAT+D D+ I + +VDR + + R+YVQPQ+V
Sbjct: 344 FIIRSFGG-DVSWDKSLCIGATYDVTDSCITHQIVDRPG-----QQTPIIGRYYVQPQWV 397
Query: 187 FDCINARRLLPVKDYMPGVKQIPHLCPFADYSKG-YVPPE 303
FDC+NAR LLPV +Y PG++ PHL PF +G Y+PPE
Sbjct: 398 FDCVNARLLLPVAEYFPGMQLPPHLSPFVSEKEGDYIPPE 437
>sp|P79741|PESC_BRARE Pescadillo
Length = 582
Score = 93.2 bits (230), Expect = 6e-19
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Frame = +1
Query: 7 FVLRCCGATEVSWDSSVASGATFDENDAGIEYHVVDRTNLGAEARSASRVSRFYVQPQFV 186
FV+RC G EVSWD S+ G+T++ D I +H+VDR ++ + ++R+Y+QPQ+V
Sbjct: 346 FVIRCFGG-EVSWDKSLCIGSTYEATDETITHHIVDRPSMDKQY-----INRYYIQPQWV 399
Query: 187 FDCINARRLLPVKDYMPGVKQIPHLCPFADYSKG-YVPPE 303
+D +NA+ LPV++Y GV PHL PF + ++G YVPPE
Sbjct: 400 YDSVNAKIQLPVEEYFLGVTLPPHLSPFVEETEGDYVPPE 439
>sp|O00541|PESC_HUMAN Pescadillo homolog 1
Length = 588
Score = 91.7 bits (226), Expect = 2e-18
Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Frame = +1
Query: 7 FVLRCCGATEVSWDSSVASGATFDENDAGIEYHVVDRTNLGAEARSASRVSRFYVQPQFV 186
F++R G EVSWD S+ GAT+D D+ I + +VDR + S + R YVQPQ+V
Sbjct: 345 FIIRSFGG-EVSWDKSLCIGATYDVTDSRITHQIVDRPG-----QQTSVIGRCYVQPQWV 398
Query: 187 FDCINARRLLPVKDYMPGVKQIPHLCPFADYSKG-YVPPE 303
FD +NAR LLPV +Y GV+ PHL PF +G YVPPE
Sbjct: 399 FDSVNARLLLPVAEYFSGVQLPPHLSPFVTEKEGDYVPPE 438
>sp|O60164|PESC_SCHPO Pescadillo homolog
Length = 607
Score = 63.2 bits (152), Expect = 7e-10
Identities = 41/122 (33%), Positives = 58/122 (47%)
Frame = +1
Query: 7 FVLRCCGATEVSWDSSVASGATFDENDAGIEYHVVDRTNLGAEARSASRVSRFYVQPQFV 186
FV+R G +V WD + SG+ F E+D I +H+ DR ++ S R Y+QPQ+V
Sbjct: 371 FVIRAFGG-KVGWDPILGSGSPFSESDPVITHHICDRPHI-----SQKYEGRIYIQPQWV 424
Query: 187 FDCINARRLLPVKDYMPGVKQIPHLCPFADYSKGYVPPEYRYLKGEIDADALYVPDDVLE 366
+D IN L Y G PHL PF + PE E+ A+ + L+
Sbjct: 425 YDSINKGILERTDLYACGATLPPHLSPFVKVGENDYDPE-----AELSAEENDDVSEALD 479
Query: 367 DN 372
DN
Sbjct: 480 DN 481
>sp|P53261|PESC_YEAST Pescadillo homolog (Nucleolar protein 7)
Length = 605
Score = 55.5 bits (132), Expect = 1e-07
Identities = 32/97 (32%), Positives = 49/97 (50%)
Frame = +1
Query: 7 FVLRCCGATEVSWDSSVASGATFDENDAGIEYHVVDRTNLGAEARSASRVSRFYVQPQFV 186
F++ CG +S + D + + + + +VDR L + R Y+QPQ++
Sbjct: 378 FLILSCGGNVISEAAMDQIENKKDIDMSKVTHQIVDRPVLKNKV-----AGRTYIQPQWI 432
Query: 187 FDCINARRLLPVKDYMPGVKQIPHLCPFADYSKGYVP 297
FDCIN L+P Y+PG PHL P+ D + GY P
Sbjct: 433 FDCINKGELVPANKYLPGEALPPHLSPWGD-AIGYDP 468
Score = 29.6 bits (65), Expect = 8.4
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 598 SKEELLKQIAARREIKLREMDLPNKRLNLYKKMKHSEKK 714
SK + K E KL+ + + NK+ LYKKMK+S K
Sbjct: 538 SKNKKRKVDEEEEEKKLKMIMMSNKQKKLYKKMKYSNAK 576
>sp|O83949|HTPG_TREPA Chaperone protein htpG (Heat shock protein htpG) (High temperature
protein G)
Length = 639
Score = 34.3 bits (77), Expect = 0.34
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 154 VSRFYVQPQFVFDCINARRLLPVKDYMPGVKQIPHLCPFADYSKGYVPPEYRYLKGEIDA 333
V+ FYV + FD +A DY PGVK D K +P R+++G ID+
Sbjct: 287 VTLFYVPAKAPFDLFHA-------DYKPGVKLFVKRVFITDDEKELLPVYLRFVRGVIDS 339
Query: 334 D--ALYVPDDVLEDN 372
+ L V ++L+ N
Sbjct: 340 EDLPLNVSREILQQN 354
>sp|P61188|HTPG_TREDE Chaperone protein htpG (Heat shock protein htpG) (High temperature
protein G)
Length = 640
Score = 33.5 bits (75), Expect = 0.58
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 163 FYVQPQFVFDCINARRLLPVKDYMPGVKQIPHLCPFADYSKGYVPPEYRYLKGEIDAD-- 336
FYV + FD +A DY PGVK D K +P R+++G ID++
Sbjct: 290 FYVPSKAPFDMFHA-------DYRPGVKLFVKRVFITDDEKELLPTYLRFVRGVIDSEDL 342
Query: 337 ALYVPDDVLEDN 372
L V ++L+ N
Sbjct: 343 PLNVSREILQQN 354
>sp|Q72PB6|LNT1_LEPIC Apolipoprotein N-acyltransferase 1 (ALP N-acyltransferase 1)
Length = 576
Score = 32.0 bits (71), Expect = 1.7
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 199 NARRLLPVKDYMPGVKQIPHLCPFADYSKGYVPPEYRYL--KGEIDADALYVPDDVLEDN 372
N RRLLP +Y+P K P L + YVP E+ L +I ++P ++ + N
Sbjct: 354 NKRRLLPFGEYLPMEKNFPFLRSIFQETSRYVPGEFPKLLIGNKIQNQRSFLPPEISKLN 413
>sp|Q8F724|LNT1_LEPIN Apolipoprotein N-acyltransferase 1 (ALP N-acyltransferase 1)
Length = 576
Score = 32.0 bits (71), Expect = 1.7
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 199 NARRLLPVKDYMPGVKQIPHLCPFADYSKGYVPPEYRYL--KGEIDADALYVPDDVLEDN 372
N RRLLP +Y+P K P L + YVP E+ L +I ++P ++ + N
Sbjct: 354 NKRRLLPFGEYLPMEKNFPFLRSIFQETSRYVPGEFPKLLIGNKIQNQRSFLPPEISKLN 413
>sp|Q7VFD7|HTPG_HELHP Chaperone protein htpG (Heat shock protein htpG) (High temperature
protein G)
Length = 618
Score = 31.2 bits (69), Expect = 2.9
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 163 FYVQPQFVFDCINARRLLPVKDYMPGVKQIPHLCPFADYSKGYVPPEYRYLKGEIDAD-- 336
FY+ + FD DY GVK D K +PP R+++G ID++
Sbjct: 282 FYIPQKAPFDLFRV-------DYQSGVKLYVKRVFITDDDKELLPPYLRFVRGVIDSEDL 334
Query: 337 ALYVPDDVLEDN 372
L V ++L+ N
Sbjct: 335 PLNVSREILQQN 346
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,043,823
Number of Sequences: 369166
Number of extensions: 1171676
Number of successful extensions: 4104
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4092
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6316483550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)