Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_F12
(861 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 475 e-134
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 475 e-134
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 475 e-134
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 473 e-133
sp|Q9W6Y1|HSP7C_ORYLA Heat shock cognate 71 kDa protein (Hs... 472 e-133
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 469 e-132
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 468 e-132
sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (... 463 e-130
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 461 e-129
sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A 460 e-129
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 475 bits (1222), Expect = e-134
Identities = 247/285 (86%), Positives = 253/285 (88%)
Frame = +1
Query: 7 VKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDKKVGSERNVLIF 186
V +AVVTVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLDKKVG+ERNVLIF
Sbjct: 139 VTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIF 198
Query: 187 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKR 366
DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKHKKDIS+NKR
Sbjct: 199 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKR 258
Query: 367 AVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVE 546
AVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVE
Sbjct: 259 AVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVE 318
Query: 547 KALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 726
KALRDAKLDK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 319 KALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 378
Query: 727 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTK 861
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTK
Sbjct: 379 ILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTK 423
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 475 bits (1222), Expect = e-134
Identities = 247/285 (86%), Positives = 253/285 (88%)
Frame = +1
Query: 7 VKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDKKVGSERNVLIF 186
V +AVVTVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLDKKVG+ERNVLIF
Sbjct: 139 VTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIF 198
Query: 187 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKR 366
DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKHKKDIS+NKR
Sbjct: 199 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKR 258
Query: 367 AVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVE 546
AVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVE
Sbjct: 259 AVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVE 318
Query: 547 KALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 726
KALRDAKLDK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 319 KALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 378
Query: 727 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTK 861
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTK
Sbjct: 379 ILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTK 423
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 475 bits (1222), Expect = e-134
Identities = 247/285 (86%), Positives = 253/285 (88%)
Frame = +1
Query: 7 VKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDKKVGSERNVLIF 186
V +AVVTVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLDKKVG+ERNVLIF
Sbjct: 139 VTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIF 198
Query: 187 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKR 366
DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKHKKDIS+NKR
Sbjct: 199 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKR 258
Query: 367 AVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVE 546
AVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVE
Sbjct: 259 AVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVE 318
Query: 547 KALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 726
KALRDAKLDK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 319 KALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 378
Query: 727 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTK 861
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTK
Sbjct: 379 ILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTK 423
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 473 bits (1217), Expect = e-133
Identities = 245/285 (85%), Positives = 253/285 (88%)
Frame = +1
Query: 7 VKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDKKVGSERNVLIF 186
V +AVVTVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKKVG+ERNVLIF
Sbjct: 139 VNNAVVTVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIF 198
Query: 187 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKR 366
DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRK+KKDISDNKR
Sbjct: 199 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKYKKDISDNKR 258
Query: 367 AVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVE 546
AVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVE
Sbjct: 259 AVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVE 318
Query: 547 KALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 726
K+LRDAK+DK +HDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 319 KSLRDAKMDKAQVHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 378
Query: 727 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTK 861
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTK
Sbjct: 379 ILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTK 423
>sp|Q9W6Y1|HSP7C_ORYLA Heat shock cognate 71 kDa protein (Hsc70.1)
Length = 686
Score = 472 bits (1215), Expect = e-133
Identities = 244/285 (85%), Positives = 253/285 (88%)
Frame = +1
Query: 7 VKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDKKVGSERNVLIF 186
V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKKVGSERNVLIF
Sbjct: 139 VNNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKVGSERNVLIF 198
Query: 187 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKR 366
DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRK+KKDISDNKR
Sbjct: 199 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKYKKDISDNKR 258
Query: 367 AVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVE 546
AVRRLR+ACERAKRTLSSS QA+IEIDSLYEG+DFYTSITRARFEELNADLFR TL+PVE
Sbjct: 259 AVRRLRSACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLDPVE 318
Query: 547 KALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 726
K+LRDAK+DK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 319 KSLRDAKMDKGQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 378
Query: 727 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTK 861
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTK
Sbjct: 379 ILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTK 423
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 469 bits (1208), Expect = e-132
Identities = 245/285 (85%), Positives = 251/285 (88%)
Frame = +1
Query: 7 VKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDKKVGSERNVLIF 186
V +AVVTVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLDKKVG+ERNVLIF
Sbjct: 139 VTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIF 198
Query: 187 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKR 366
DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKR KKDIS+NKR
Sbjct: 199 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRNDKKDISENKR 258
Query: 367 AVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVE 546
AVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVE
Sbjct: 259 AVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVE 318
Query: 547 KALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 726
KALRDAKLDK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 319 KALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 378
Query: 727 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTK 861
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTK
Sbjct: 379 ILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTK 423
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 468 bits (1205), Expect = e-132
Identities = 244/285 (85%), Positives = 251/285 (88%)
Frame = +1
Query: 7 VKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDKKVGSERNVLIF 186
V +AV+TVPAY NDSQRQATKDAG ISGLNVL IINEPTAAAIAYGLDKKVG+ERNVLIF
Sbjct: 139 VSNAVITVPAYSNDSQRQATKDAGTISGLNVLVIINEPTAAAIAYGLDKKVGAERNVLIF 198
Query: 187 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKR 366
DLGGG+FDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKHKKDISDNKR
Sbjct: 199 DLGGGSFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFITEFKRKHKKDISDNKR 258
Query: 367 AVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVE 546
AVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVE
Sbjct: 259 AVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVE 318
Query: 547 KALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 726
KALRDAK+DK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 319 KALRDAKMDKAQIHDIVLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAA 378
Query: 727 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTK 861
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTK
Sbjct: 379 ILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTK 423
>sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (Hsc 70-4)
Length = 652
Score = 463 bits (1191), Expect = e-130
Identities = 237/285 (83%), Positives = 251/285 (88%)
Frame = +1
Query: 7 VKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDKKVGSERNVLIF 186
V++AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIF
Sbjct: 139 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGSGERNVLIF 198
Query: 187 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKR 366
DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF+QEFKRK+KKD++ NKR
Sbjct: 199 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKR 258
Query: 367 AVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVE 546
A+RRLRTACERAKRTLSSS QA+IEIDSL+EGIDFYTSITRARFEELNADLFRST+EPVE
Sbjct: 259 ALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVE 318
Query: 547 KALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 726
K+LRDAK+DK IHDIVLVGGSTRIPK+QKLLQD FNGKELNKSINPDE
Sbjct: 319 KSLRDAKMDKSQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 378
Query: 727 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTK 861
IL GDKSE VQD GIETAGGVMT LIKRNTTIPTK
Sbjct: 379 ILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTK 423
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 461 bits (1185), Expect = e-129
Identities = 236/285 (82%), Positives = 248/285 (87%)
Frame = +1
Query: 7 VKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDKKVGSERNVLIF 186
+ +AV+TVPAYFNDSQRQ TKDAG ISGLNVLRIINEPTAAAIAYGLDKKVGSERNVLIF
Sbjct: 139 INNAVITVPAYFNDSQRQRTKDAGTISGLNVLRIINEPTAAAIAYGLDKKVGSERNVLIF 198
Query: 187 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKR 366
DLGGGTFDVSILTIEDGIF++KSTAGDTHLGGEDFDNRMVNHFI EFKRKHKKDISDNKR
Sbjct: 199 DLGGGTFDVSILTIEDGIFDLKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISDNKR 258
Query: 367 AVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVE 546
AVRRL TACERAKRTLSSS QA+IEIDSLYEG+DFYTSITRARFEELNADLFR TL+PVE
Sbjct: 259 AVRRLATACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLDPVE 318
Query: 547 KALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 726
KALRDAK+DK +HDIVLVGGSTRIPK++KLLQD FNGKELNKSINPDE
Sbjct: 319 KALRDAKMDKAQVHDIVLVGGSTRIPKMEKLLQDFFNGKELNKSINPDEAVAYGAAVQAE 378
Query: 727 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTK 861
GDKSE VQD GIETAGGVMT LIKRNTTIPTK
Sbjct: 379 SSLGDKSENVQDLVLLDVTPLSLGIETAGGVMTVLIKRNTTIPTK 423
>sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A
Length = 640
Score = 460 bits (1184), Expect = e-129
Identities = 237/285 (83%), Positives = 252/285 (88%)
Frame = +1
Query: 7 VKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDKKVGSERNVLIF 186
VKDAVVTVPAYFNDSQRQATKDAGAI+GLNVLRIINEPTAAAIAYGLDKK ERNVLIF
Sbjct: 140 VKDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKGHGERNVLIF 199
Query: 187 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKR 366
DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF EFKRKHKKD++ N R
Sbjct: 200 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFCAEFKRKHKKDLASNPR 259
Query: 367 AVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVE 546
A+RRLRTACERAKRTLSSS+QA+IEIDSL+EGIDFYT+ITRARFEEL ADLFRST++PVE
Sbjct: 260 ALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVE 319
Query: 547 KALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXX 726
K+LRDAK+DK +HDIVLVGGSTRIPK+QKLL DLF+GKELNKSINPDE
Sbjct: 320 KSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAA 379
Query: 727 ILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTK 861
ILSGDKSEAVQD GIETAGGVMTALIKRNTTIPTK
Sbjct: 380 ILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTK 424
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.316 0.134 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,396,149
Number of Sequences: 369166
Number of extensions: 1687300
Number of successful extensions: 6555
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5347
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8534739105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)